Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 3.2e-190 668.3 346 100.0
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 7.3e-171 604.0 346 93.1
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 1.4e-153 546.6 320 85.6
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 5.5e-150 534.6 320 84.1
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 1.8e-140 503.1 337 76.0
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 7.4e-139 497.7 319 77.4
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 1.6e-138 496.5 320 76.9
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 1.1e-137 493.8 319 75.5
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 1.2e-136 490.3 322 75.2
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 1.5e-136 490.0 320 76.2
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 1.0e-135 487.3 323 77.1
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 2.2e-135 486.1 320 77.2
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 5.0e-135 485.0 320 73.8
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 5.0e-135 485.0 320 76.9
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 6.5e-135 484.6 320 74.4
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 8.5e-135 484.2 320 75.9
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 9.3e-134 480.7 320 75.0
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 1.2e-133 480.3 326 73.3
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 2.1e-133 479.6 320 74.4
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 2.7e-133 479.2 319 74.9
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 3.6e-133 478.8 320 75.9
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 3.6e-133 478.8 321 72.3
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 4.6e-133 478.4 321 72.0
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 4.6e-133 478.4 320 74.7
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 6.1e-133 478.0 316 73.7
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 7.9e-133 477.6 318 73.0
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 1.8e-132 476.5 319 74.9
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 1.8e-132 476.5 321 72.0
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 1.8e-132 476.5 319 72.7
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 5.1e-132 474.9 318 76.4
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 6.7e-132 474.6 320 74.4
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 6.7e-132 474.6 320 74.4
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 1.9e-131 473.0 318 74.5
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 2.5e-131 472.6 320 73.1
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 2.5e-131 472.6 320 74.4
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 4.3e-131 471.9 320 72.2
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 7.4e-131 471.1 318 73.3
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 9.7e-131 470.7 318 75.2
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 1.7e-130 469.9 331 71.0
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 4.8e-130 468.4 318 71.7
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 1.1e-129 467.2 320 71.6
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 1.1e-129 467.2 318 74.2
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 1.8e-129 466.5 321 72.0
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 5.3e-129 464.9 317 73.8
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 5.3e-129 464.9 321 71.0
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 5.3e-129 464.9 318 71.7
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 9.1e-129 464.2 327 71.6
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 1.2e-128 463.8 320 73.1
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 2.0e-128 463.0 318 71.7
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 2.6e-128 462.6 320 70.6
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 3.4e-128 462.2 318 71.4
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 3.4e-128 462.2 318 71.4
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 4.5e-128 461.8 318 71.1
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 4.5e-128 461.8 306 77.1
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 1.0e-127 460.7 320 71.6
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 2.9e-127 459.1 318 70.8
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 5.0e-127 458.4 305 74.8
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 1.9e-126 456.4 316 70.9
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 7.2e-126 454.5 324 69.8
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 9.4e-126 454.1 322 69.6
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 2.7e-125 452.6 367 64.6
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 2.7e-125 452.6 306 73.5
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 6.1e-125 451.4 305 73.1
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 7.9e-125 451.1 320 71.9
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 1.4e-124 450.3 340 67.9
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 5.1e-124 448.4 308 71.1
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 6.7e-124 448.0 299 75.3
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 6.7e-124 448.0 320 72.8
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.1e-123 447.2 308 71.1
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 2.8e-122 442.6 306 72.9
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 6.3e-122 441.4 311 70.1
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.1e-121 440.7 309 70.6
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 6.5e-119 431.4 320 68.1
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 1.9e-118 429.9 319 67.4
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 9.4e-118 427.6 320 70.6
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 4.7e-117 425.2 314 68.5
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 6.3e-114 414.8 286 74.1
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 2.6e-112 409.5 320 66.9
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 5.9e-112 408.3 300 69.7
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 7.7e-112 407.9 271 74.5
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 3.2e-110 402.5 308 66.9
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 4.4e-107 392.1 341 62.5
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 1.8e-100 370.2 318 63.8
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 5.7e-99 365.2 317 62.1
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 2.2e-98 363.2 250 72.4
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 8.3e-98 361.3 272 69.9
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 8.3e-98 361.3 272 69.9
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 1.7e-95 353.6 257 71.2
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 5.0e-95 352.1 258 72.5
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 4.9e-90 335.5 235 69.8
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 7.0e-89 331.6 324 52.2
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 3.5e-88 329.3 317 51.1
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 8.0e-85 318.2 223 71.3
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 2.6e-83 313.2 321 53.0
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 7.0e-81 305.1 317 47.6
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 1.2e-80 304.3 193 74.1
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 6.0e-80 302.0 317 47.3
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 1.8e-76 290.4 181 77.9
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 2.6e-75 286.6 218 67.4
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 4.3e-70 269.2 353 47.3
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 4.3e-70 269.2 235 59.1
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 9.5e-70 268.1 311 43.1
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 7.1e-65 251.9 270 50.4
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 1.5e-54 217.6 148 72.3
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 5.6e-54 215.7 316 39.6
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 7.8e-48 195.3 230 49.1
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 3.2e-41 173.3 129 63.6
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 1.8e-39 167.5 131 63.4
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 3.9e-39 166.4 249 40.2
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 2.6e-35 153.7 103 72.8
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 4.2e-25 119.8 70 87.1
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 2.1e-24 117.5 88 67.0
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 5.7e-22 109.4 95 61.1
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 6.5e-18 95.9 183 33.9
CSS0046000 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D004872 5.0e-10 69.7 44 77.3
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 1.1e-09 68.6 72 50.0
ECA233G3510 Erigeron canadensis HOM05D015936 ORTHO05D022524 2.7e-08 63.9 44 63.6


User provided reference genes

Program Settings