Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007858 Camellia sinensis var. sinensis HOM05D010605 ORTHO05D010031 2.3e-100 369.0 197 100.0
Dinv37573 Davidia involucrata HOM05D010605 ORTHO05D010031 2.4e-57 226.1 196 62.2
Hma1.2p1_0216F.1_g091240 Hydrangea macrophylla HOM05D010605 ORTHO05D010031 6.9e-57 224.6 199 60.3
Actinidia28329 Actinidia chinensis HOM05D010605 ORTHO05D010031 7.1e-54 214.5 187 63.1
Oeu042370.1 Olea europaea HOM05D010605 ORTHO05D010031 1.9e-46 189.9 195 52.8
Lj8P215T31 Lonicera japonica HOM05D010605 ORTHO05D010031 1.6e-42 176.8 195 49.2
Dinv08500 Davidia involucrata HOM05D010605 ORTHO05D010031 3.1e-41 172.6 188 53.2
SGA_v2.0_scaffold173G39118 Striga asiatica HOM05D010605 ORTHO05D010031 6.1e-37 158.3 182 46.7
Haze_08725 Corylus avellana HOM05D010605 ORTHO05D010031 1.4e-33 147.1 182 45.1
Haze_08723 Corylus avellana HOM05D010605 ORTHO05D010031 2.4e-33 146.4 182 44.5
CiPaw.12G087400 Carya illinoinensis HOM05D010605 ORTHO05D010031 6.9e-33 144.8 192 43.2
Cfa012264 Carpinus fangiana HOM05D010605 ORTHO05D010031 2.9e-31 139.4 182 44.0
CiPaw.12G087500 Carya illinoinensis HOM05D010605 ORTHO05D010031 5.5e-30 135.2 182 42.9
Haze_08724 Corylus avellana HOM05D010605 ORTHO05D010031 2.1e-29 133.3 181 41.4
Haze_08727 Corylus avellana HOM05D010605 ORTHO05D010031 2.1e-29 133.3 181 41.4
Haze_08721 Corylus avellana HOM05D010605 ORTHO05D010031 1.0e-28 131.0 183 42.1
CiPaw.11G127200 Carya illinoinensis HOM05D010605 ORTHO05D010031 1.3e-26 124.0 192 37.0
QL02p032625 Quercus lobata HOM05D010605 ORTHO05D010031 1.7e-26 123.6 195 43.1
Cfa012265 Carpinus fangiana HOM05D010605 ORTHO05D010031 6.9e-25 118.2 190 40.5
CiPaw.11G127100 Carya illinoinensis HOM05D010605 ORTHO05D010031 5.0e-23 112.1 191 36.6
FAN10G1930 Fragaria x ananassa HOM05D010238 ORTHO05D010031 8.0e-13 78.2 181 32.6
FAN06G3436 Fragaria x ananassa HOM05D010238 ORTHO05D010031 2.3e-12 76.6 183 29.5
Prupe.1G469500 Prunus persica HOM05D010238 ORTHO05D010031 9.7e-11 71.2 187 29.4
Prupe.1G469800 Prunus persica HOM05D010238 ORTHO05D010031 2.2e-10 70.1 236 28.0
Prupe.1G469600 Prunus persica HOM05D010238 ORTHO05D010031 2.8e-10 69.7 187 29.9
Prupe.1G470400 Prunus persica HOM05D010238 ORTHO05D010031 8.2e-10 68.2 216 28.7
Nitab4.5_0003117g0010 Nicotiana tabacum HOM05D010238 ORTHO05D010031 1.1e-09 67.8 183 28.4
Prupe.1G470100 Prunus persica HOM05D010238 ORTHO05D010031 1.8e-09 67.0 205 28.8
CDE10G0521 Ceratophyllum demersum HOM05D003548 ORTHO05D004066 2.4e-09 66.6 181 24.3
Prupe.1G470600 Prunus persica HOM05D010238 ORTHO05D010031 2.4e-09 66.6 204 28.4
Solyc08g067700.1 Solanum lycopersicum HOM05D010238 ORTHO05D010031 2.6e-08 63.2 215 25.1
Manes.16G117600 Manihot esculenta HOM05D017842 ORTHO05D020741 1.0e-07 61.2 180 26.7
Ciclev10010677m.g Citrus clementina HOM05D010238 ORTHO05D010031 2.9e-07 59.7 183 29.0
Hma1.2p1_0175F.1_g077090 Hydrangea macrophylla HOM05D010238 ORTHO05D010031 3.2e-06 56.2 104 32.7
QL09p011993 Quercus lobata HOM05D015404 ORTHO05D011570 4.2e-06 55.8 171 22.2


User provided reference genes

Program Settings