Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007844 Camellia sinensis var. sinensis HOM05D005239 ORTHO05D006698 3.1e-254 881.3 458 100.0
vmacro21097 Vaccinium macrocarpon HOM05D005239 ORTHO05D006698 1.4e-201 706.4 452 82.7
Actinidia21601 Actinidia chinensis HOM05D005239 ORTHO05D006698 6.7e-196 687.6 460 81.5
Hma1.2p1_0601F.1_g187220 Hydrangea macrophylla HOM05D005239 ORTHO05D006698 2.5e-195 685.6 460 78.7
Rhsim01G0145300 Rhododendron simsii HOM05D005239 ORTHO05D006698 4.0e-193 678.3 491 76.6
Dinv43567 Davidia involucrata HOM05D005239 ORTHO05D006698 4.1e-185 651.7 412 82.5
Dinv44000 Davidia involucrata HOM05D005239 ORTHO05D001060 3.3e-179 632.1 369 87.0
TAR629G3002 Trochodendron aralioides HOM05D005239 ORTHO05D006698 1.8e-172 609.8 464 70.7
CiPaw.13G020400 Carya illinoinensis HOM05D005239 ORTHO05D006698 2.6e-171 605.9 459 72.8
TAR636G2805 Trochodendron aralioides HOM05D005239 ORTHO05D006698 2.6e-171 605.9 459 72.3
Nn6g33642 Nelumbo nucifera HOM05D005239 ORTHO05D006698 8.2e-170 600.9 462 69.9
Cfa011001 Carpinus fangiana HOM05D002067 ORTHO05D001060 1.6e-165 586.6 450 70.2
Sopen01g032450 Solanum pennellii HOM05D005239 ORTHO05D006698 2.6e-163 579.3 457 68.7
Solyc01g080860.3 Solanum lycopersicum HOM05D005239 ORTHO05D006698 3.3e-163 578.9 457 68.7
Peaxi162Scf01144g00013 Petunia axillaris HOM05D005239 ORTHO05D006698 4.8e-162 575.1 458 67.7
Nitab4.5_0004264g0020 Nicotiana tabacum HOM05D005239 ORTHO05D006698 1.4e-161 573.5 458 68.3
Thecc.04G216000 Theobroma cacao HOM05D005239 ORTHO05D006698 2.6e-160 569.3 460 69.1
MELO3C006242.2 Cucumis melo HOM05D005239 ORTHO05D006698 7.7e-160 567.8 458 66.8
CsaV3_3G010220 Cucumis sativus L. HOM05D005239 ORTHO05D006698 1.7e-159 566.6 458 67.5
DCAR_029633 Daucus carota HOM05D005239 ORTHO05D006698 2.2e-159 566.2 457 67.8
PGSC0003DMG400001672 Solanum tuberosum HOM05D005239 ORTHO05D006698 2.2e-159 566.2 482 64.1
CAN.G1480.7 Capsicum annuum HOM05D005239 ORTHO05D006698 3.8e-159 565.5 397 74.3
Gorai.006G218900 Gossypium raimondii HOM05D005239 ORTHO05D006698 5.0e-159 565.1 463 67.2
Duzib151G1142 Durio zibethinus HOM05D005239 ORTHO05D006698 1.1e-158 563.9 468 66.7
RcHm_v2.0_Chr6g0273481 Rosa chinensis HOM05D005239 ORTHO05D006698 1.1e-158 563.9 454 68.9
PGR119G0794 Punica granatum HOM05D005239 ORTHO05D006698 1.5e-158 563.5 468 67.3
Cc02_g25930 Coffea canephora HOM05D005239 ORTHO05D006698 1.9e-158 563.1 455 67.5
GSVIVG01018386001 Vitis vinifera HOM05D005239 ORTHO05D006698 1.9e-158 563.1 455 68.4
Gohir.D09G195500 Gossypium hirsutum HOM05D005239 ORTHO05D006698 3.2e-158 562.4 463 67.0
TWI59G0212 Tripterygium wilfordii HOM05D005239 ORTHO05D006698 5.5e-158 561.6 466 67.8
Oeu002884.1 Olea europaea HOM05D005239 ORTHO05D006698 1.6e-157 560.1 520 61.3
Gohir.A09G201600 Gossypium hirsutum HOM05D005239 ORTHO05D006698 2.1e-157 559.7 463 67.0
TWI14G1099 Tripterygium wilfordii HOM05D005239 ORTHO05D006698 2.7e-157 559.3 463 67.6
MD08G1235300 Malus domestica HOM05D005239 ORTHO05D006698 4.7e-157 558.5 463 66.5
Ah.06g191320 Amaranthus hybridus HOM05D005239 ORTHO05D006698 1.8e-156 556.6 458 67.9
COL.COLO4_20862 Corchorus olitorius HOM05D005239 ORTHO05D006698 2.3e-156 556.2 464 66.8
Haze_02934 Corylus avellana HOM05D005239 ORTHO05D006698 5.2e-156 555.1 480 64.6
Ciclev10020370m.g Citrus clementina HOM05D005239 ORTHO05D006698 1.2e-155 553.9 424 71.7
Prupe.1G571600 Prunus persica HOM05D005239 ORTHO05D006698 1.5e-155 553.5 458 67.7
Sc20g0003020 Simmondsia chinensis HOM05D005239 ORTHO05D006698 3.3e-155 552.4 380 76.6
Sed0010493 Sechium edule HOM05D005239 ORTHO05D006698 7.5e-155 551.2 446 68.2
Sed0027364 Sechium edule HOM05D005239 ORTHO05D006698 2.8e-154 549.3 459 66.7
QL04p024849 Quercus lobata HOM05D005239 ORTHO05D006698 4.8e-154 548.5 399 73.4
Atru.chr9.1540 Acer truncatum HOM05D005239 ORTHO05D006698 6.3e-154 548.1 448 68.3
Sabra02G0168400 Salix brachista HOM05D005239 ORTHO05D006698 8.2e-154 547.7 453 67.8
FvH4_2g12720 Fragaria vesca HOM05D005239 ORTHO05D006698 1.1e-153 547.4 454 68.1
ClCG05G002730 Citrullus lanatus HOM05D005239 ORTHO05D006698 2.4e-153 546.2 462 66.5
AUR62035533 Chenopodium quinoa HOM05D005239 ORTHO05D006698 3.1e-153 545.8 466 64.6
AUR62041654 Chenopodium quinoa HOM05D005239 ORTHO05D006698 4.1e-153 545.4 461 64.6
ECA234G1231 Erigeron canadensis HOM05D005239 ORTHO05D006698 2.0e-152 543.1 415 70.6
FAN27G2303 Fragaria x ananassa HOM05D005239 ORTHO05D006698 4.5e-152 542.0 467 66.4
Potri.002G216100 Populus trichocarpa HOM05D005239 ORTHO05D006698 4.5e-152 542.0 408 72.1
CANSAT54G1536 Cannabis sativa HOM05D005239 ORTHO05D006698 5.9e-152 541.6 458 67.0
SGA_v2.0_scaffold69G23296 Striga asiatica HOM05D005239 ORTHO05D006698 5.9e-152 541.6 452 66.8
SGA_v2.0_scaffold52G19274 Striga asiatica HOM05D005239 ORTHO05D006698 1.7e-151 540.0 450 66.7
FAN15G3107 Fragaria x ananassa HOM05D005239 ORTHO05D006698 2.2e-151 539.7 467 66.2
HanXRQChr17g0562471 Helianthus annuus HOM05D005239 ORTHO05D006698 3.8e-151 538.9 455 65.3
Glyma.20G243400 Glycine max HOM05D005239 ORTHO05D006698 3.2e-150 535.8 414 69.8
Manes.05G061000 Manihot esculenta HOM05D005239 ORTHO05D006698 3.2e-150 535.8 465 64.3
Eucgr.H02846 Eucalyptus grandis HOM05D005239 ORTHO05D006698 5.5e-150 535.0 476 64.1
EL10Ac4g08842 Beta vulgaris HOM05D005239 ORTHO05D006698 2.7e-149 532.7 456 65.8
Phvul.007G006700 Phaseolus vulgaris HOM05D005239 ORTHO05D006698 6.1e-149 531.6 421 68.9
CDE04G1215 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 1.4e-148 530.4 460 62.8
Lj9A547G68 Lonicera japonica HOM05D005239 ORTHO05D006698 2.3e-148 529.6 337 79.8
Lj5g0010357 Lotus japonicus HOM05D005239 ORTHO05D006698 5.2e-148 528.5 382 73.0
Aqoxy3G02472 Aquilegia oxysepala HOM05D005239 ORTHO05D006698 1.5e-147 526.9 461 62.9
arahy.Tifrunner.gnm1.ann1.X9CQTL Arachis hypogaea HOM05D005239 ORTHO05D006698 2.8e-146 522.7 369 72.9
THA.LOC104802511 Tarenaya hassleriana HOM05D005239 ORTHO05D006698 6.3e-146 521.5 456 64.3
arahy.Tifrunner.gnm1.ann1.XN1C7B Arachis hypogaea HOM05D005239 ORTHO05D006698 1.1e-145 520.8 361 74.0
VMungo0720G0476 Vigna mungo HOM05D005239 ORTHO05D006698 5.4e-145 518.5 419 67.5
PSO170G2576 Papaver somniferum HOM05D005239 ORTHO05D006698 1.0e-143 514.2 464 61.9
THA.LOC104817164 Tarenaya hassleriana HOM05D005239 ORTHO05D006698 1.1e-142 510.8 455 62.9
ATR1153G024 Amborella trichopoda HOM05D005239 ORTHO05D006698 2.5e-142 509.6 450 63.1
PSO302G0170 Papaver somniferum HOM05D005239 ORTHO05D006698 2.5e-142 509.6 465 61.7
Medtr1g116110 Medicago truncatula HOM05D005239 ORTHO05D006698 4.2e-142 508.8 418 65.6
Ca_11344_v3 Cicer arietinum L. HOM05D005239 ORTHO05D006698 7.2e-142 508.1 417 65.9
TPR.G10426 Trifolium pratense HOM05D005239 ORTHO05D006698 2.1e-141 506.5 419 65.4
Aa31LG1G26110 Aethionema arabicum HOM05D005239 ORTHO05D006698 1.0e-140 504.2 399 66.2
Lalb_Chr02g0143811 Lupinus albus HOM05D005239 ORTHO05D006698 2.3e-140 503.1 365 70.7
HPP92_001886 Vanilla planifolia HOM05D005239 ORTHO05D006698 5.2e-140 501.9 452 62.6
unitig_26.g9718 Utricularia gibba HOM05D005239 ORTHO05D006698 1.7e-138 496.9 488 58.4
Actinidia33289 Actinidia chinensis HOM05D005239 ORTHO05D006698 6.3e-138 495.0 332 81.0
Thhalv10001456m.g Eutrema salsugineum HOM05D005239 ORTHO05D006698 2.0e-136 490.0 407 64.9
Nitab4.5_0001476g0120 Nicotiana tabacum HOM05D005239 ORTHO05D006698 2.0e-136 490.0 458 61.1
AT2G44520 Arabidopsis thaliana HOM05D005239 ORTHO05D006698 7.8e-136 488.0 463 60.0
Carub.0004s2708 Capsella rubella HOM05D005239 ORTHO05D006698 1.0e-135 487.6 404 63.9
Psat6g232360 Pisum sativum HOM05D005239 ORTHO05D006698 1.7e-135 486.9 418 64.1
AL4G43540 Arabidopsis lyrata HOM05D005239 ORTHO05D006698 2.9e-135 486.1 463 60.3
BcaC02g07098 Brassica carinata HOM05D005239 ORTHO05D006698 3.8e-135 485.7 432 62.5
BraA04t18797Z Brassica rapa HOM05D005239 ORTHO05D006698 3.8e-135 485.7 433 60.5
BolC4t28610H Brassica oleracea HOM05D005239 ORTHO05D006698 1.9e-134 483.4 431 62.4
Sp4g26610 Schrenkiella parvula HOM05D005239 ORTHO05D006698 3.3e-134 482.6 412 64.6
BcaB06g29384 Brassica carinata HOM05D005239 ORTHO05D006698 1.2e-133 480.7 371 67.1
Lsat_1_v5_gn_4_39040 Lactuca sativa HOM05D005239 ORTHO05D006698 4.7e-133 478.8 448 61.4
Os01g0527700 Oryza sativa ssp. japonica HOM05D005239 ORTHO05D006698 4.7e-133 478.8 360 68.9
Zm00001eb402310 Zea mays HOM05D005239 ORTHO05D006698 5.2e-132 475.3 370 68.4
C04p05410 Brassica napus HOM05D005239 ORTHO05D006698 2.7e-128 463.0 357 67.8
BolC4t22181H Brassica oleracea HOM05D005239 ORTHO05D006698 2.7e-128 463.0 357 67.8
Duzib212G0896 Durio zibethinus HOM05D005239 ORTHO05D006698 1.7e-127 460.3 466 59.0
C04p71050 Brassica napus HOM05D000073 ORTHO05D006698 5.2e-124 448.7 345 67.2
A04p33360 Brassica napus HOM05D000073 ORTHO05D006698 8.9e-124 448.0 340 66.8
BcaNung07053 Brassica carinata HOM05D005239 ORTHO05D006698 2.0e-123 446.8 366 63.9
Hma1.2p1_0601F.1_g187230 Hydrangea macrophylla HOM05D005239 ORTHO05D006698 9.8e-123 444.5 297 78.5
BcaC02g12301 Brassica carinata HOM05D005239 ORTHO05D006698 7.0e-121 438.3 350 65.7
Zm00001eb005400 Zea mays HOM05D005239 ORTHO05D006698 2.0e-120 436.8 336 67.3
MD15G1426600 Malus domestica HOM05D005239 ORTHO05D006698 3.9e-119 432.6 311 72.3
SEGI_24425 Sequoiadendron giganteum HOM05D005239 ORTHO05D006698 1.7e-114 417.2 272 73.2
Cpa.g.sc20.28 Carica papaya HOM05D005239 ORTHO05D006698 2.1e-112 410.2 291 75.6
Migut.B01467 Erythranthe guttata HOM05D005239 ORTHO05D006698 1.3e-111 407.5 328 68.3
AagrBONN_evm.TU.Sc2ySwM_369.187 Anthoceros agrestis HOM05D005239 ORTHO05D006698 1.3e-106 391.0 387 54.5
Mapoly0029s0153 Marchantia polymorpha HOM05D005239 ORTHO05D006698 2.8e-101 373.2 377 52.3
SMO364G0841 Selaginella moellendorffii HOM05D005239 ORTHO05D006698 2.4e-97 360.1 351 52.7
CDE12G0888 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 1.5e-94 350.9 248 72.2
CAN.G74.42 Capsicum annuum HOM05D005239 ORTHO05D006698 6.9e-92 342.0 308 60.1
CBR_g3821 Chara braunii HOM05D005239 ORTHO05D006698 1.9e-89 334.0 292 58.6
CARHR139710 Cardamine hirsuta HOM05D005239 ORTHO05D006698 2.4e-89 333.6 252 67.5
Pp3c14_19200 Physcomitrium patens HOM05D005239 ORTHO05D006698 7.4e-86 322.0 261 60.5
PSO357G0304 Papaver somniferum HOM05D005239 ORTHO05D006698 9.6e-86 321.6 201 80.1
Oeu037395.1 Olea europaea HOM05D005239 ORTHO05D006698 3.8e-82 309.7 350 54.0
Cre12.g516350 Chlamydomonas reinhardtii HOM05D005239 ORTHO05D006698 1.5e-70 271.2 306 49.3
BraA05t19443Z Brassica rapa HOM05D005239 ORTHO05D006698 9.7e-70 268.5 287 51.9
PRCOL_00000009 Prasinoderma coloniale HOM05D005239 ORTHO05D006698 1.5e-67 261.2 349 43.3
A05p04670 Brassica napus HOM05D005239 ORTHO05D006698 2.0e-67 260.8 295 50.5
MCO03G363 Micromonas commoda HOM05D005239 ORTHO05D006698 2.2e-66 257.3 283 50.5
MD15G1426900 Malus domestica HOM05D005239 ORTHO05D006698 9.4e-65 251.9 194 66.5
Aqoxy5G02001 Aquilegia oxysepala HOM05D005239 ORTHO05D006698 6.7e-63 245.7 170 71.2
BcaB02g08828 Brassica carinata HOM05D005239 ORTHO05D006698 2.8e-53 213.8 247 50.6
SHI13675 Sapria himalayana HOM05D005239 ORTHO05D006698 3.9e-47 193.4 204 54.9
FAN24G3432 Fragaria x ananassa HOM05D005239 ORTHO05D006698 2.6e-46 190.7 206 59.7
Cfa027222 Carpinus fangiana HOM05D005239 ORTHO05D006698 3.7e-37 160.2 296 37.8
PGR004G1759 Punica granatum HOM05D005239 ORTHO05D006698 2.7e-32 144.1 121 65.3
TPR.G37315 Trifolium pratense HOM05D005239 ORTHO05D006698 6.3e-29 132.9 83 75.9
PSO081G0040 Papaver somniferum HOM05D005239 ORTHO05D006698 7.0e-28 129.4 84 77.4
Glyma.10G293300 Glycine max HOM05D005239 ORTHO05D006698 2.0e-27 127.9 76 76.3
RcHm_v2.0_Chr6g0271171 Rosa chinensis HOM05D005239 ORTHO05D006698 1.8e-23 114.8 73 76.7
CDE12G0056 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 7.5e-22 109.4 92 62.0
RcHm_v2.0_Chr7g0200821 Rosa chinensis HOM05D005239 ORTHO05D006698 2.8e-21 107.5 73 72.6
Cc02_g25970 Coffea canephora HOM05D005239 ORTHO05D006698 6.8e-15 86.3 100 50.0
SEGI_27712 Sequoiadendron giganteum HOM05D005239 ORTHO05D006698 2.0e-11 74.7 57 66.7
SHI13676 Sapria himalayana HOM05D005239 ORTHO05D006698 3.9e-10 70.5 59 66.1
MSTRG.17096 Avicennia marina HOM05D005239 ORTHO05D006698 5.2e-07 60.1 34 85.3


User provided reference genes

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