Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007833 Camellia sinensis var. sinensis HOM05D004902 ORTHO05D006603 0.0e+00 1151.3 592 100.0
CSS0000094 Camellia sinensis var. sinensis HOM05D004902 ORTHO05D006603 0.0e+00 1135.2 592 98.6
Dinv40776 Davidia involucrata HOM05D004902 ORTHO05D006603 1.2e-295 1019.2 562 89.5
Actinidia10742 Actinidia chinensis HOM05D004902 ORTHO05D006603 4.4e-293 1010.7 583 86.4
Hma1.2p1_0036F.1_g023440 Hydrangea macrophylla HOM05D004902 ORTHO05D006603 5.4e-291 1003.8 560 89.1
GSVIVG01037683001 Vitis vinifera HOM05D004902 ORTHO05D006603 1.8e-286 988.8 561 88.6
QL08p009339 Quercus lobata HOM05D004902 ORTHO05D006603 1.2e-285 986.1 552 88.4
TWI39G0824 Tripterygium wilfordii HOM05D004902 ORTHO05D006603 2.4e-283 978.4 590 83.9
TAR362G0117 Trochodendron aralioides HOM05D004902 ORTHO05D006603 2.4e-283 978.4 559 86.4
Lj4g0024994 Lotus japonicus HOM05D004902 ORTHO05D006603 4.2e-283 977.6 549 88.0
arahy.Tifrunner.gnm1.ann1.67NMHM Arachis hypogaea HOM05D004902 ORTHO05D006603 1.2e-282 976.1 556 86.7
ClCG09G010930 Citrullus lanatus HOM05D004902 ORTHO05D006603 1.2e-282 976.1 557 86.4
MELO3C013152.2 Cucumis melo HOM05D004902 ORTHO05D006603 7.9e-282 973.4 555 86.5
Manes.03G132000 Manihot esculenta HOM05D004902 ORTHO05D006603 1.0e-281 973.0 592 83.1
Medtr3g052850 Medicago truncatula HOM05D004902 ORTHO05D006603 5.1e-281 970.7 554 86.3
TPR.G33794 Trifolium pratense HOM05D004902 ORTHO05D006603 6.7e-281 970.3 555 86.1
CiPaw.11G191900 Carya illinoinensis HOM05D004902 ORTHO05D006603 1.1e-280 969.5 551 87.7
Migut.M01740 Erythranthe guttata HOM05D004902 ORTHO05D006603 1.5e-280 969.1 552 86.4
Phvul.006G046400 Phaseolus vulgaris HOM05D004902 ORTHO05D006603 1.9e-280 968.8 544 88.2
Atru.chr2.3483 Acer truncatum HOM05D004902 ORTHO05D006603 2.5e-280 968.4 592 82.3
Cfa020314 Carpinus fangiana HOM05D004902 ORTHO05D006603 2.5e-280 968.4 594 82.7
Ciclev10007818m.g Citrus clementina HOM05D004902 ORTHO05D006603 2.5e-280 968.4 562 85.8
Glyma.18G093200 Glycine max HOM05D004902 ORTHO05D006603 5.6e-280 967.2 549 87.1
SGA_v2.0_scaffold172G39008 Striga asiatica HOM05D004902 ORTHO05D006603 5.6e-280 967.2 552 86.4
Psat5g177120 Pisum sativum HOM05D004902 ORTHO05D006603 1.3e-279 966.1 555 85.8
MSTRG.14441 Avicennia marina HOM05D004902 ORTHO05D006603 2.1e-279 965.3 550 86.4
Gohir.A11G067600 Gossypium hirsutum HOM05D004902 ORTHO05D006603 2.8e-279 964.9 562 85.1
arahy.Tifrunner.gnm1.ann1.E3581I Arachis hypogaea HOM05D004902 ORTHO05D006603 3.7e-279 964.5 573 84.5
Eucgr.F00742 Eucalyptus grandis HOM05D004902 ORTHO05D006603 4.8e-279 964.1 596 81.0
Prupe.4G217200 Prunus persica HOM05D004902 ORTHO05D006603 4.8e-279 964.1 575 84.5
Glyma.18G108300 Glycine max HOM05D004902 ORTHO05D006603 1.1e-278 963.0 549 86.5
MD03G1198000 Malus domestica HOM05D004902 ORTHO05D006603 1.8e-278 962.2 552 86.2
Gohir.D11G071500 Gossypium hirsutum HOM05D004902 ORTHO05D006603 4.0e-278 961.1 562 84.5
Gorai.007G076800 Gossypium raimondii HOM05D004902 ORTHO05D006603 6.9e-278 960.3 562 84.5
CANSAT11G1621 Cannabis sativa HOM05D004902 ORTHO05D006603 9.0e-278 959.9 560 84.8
Lj1A876G36 Lonicera japonica HOM05D004902 ORTHO05D006603 1.2e-277 959.5 569 85.1
Ca_14752_v3 Cicer arietinum L. HOM05D004902 ORTHO05D006603 1.5e-277 959.1 555 85.9
Oeu062577.2 Olea europaea HOM05D004902 ORTHO05D006603 1.5e-277 959.1 569 85.4
RcHm_v2.0_Chr5g0040671 Rosa chinensis HOM05D004902 ORTHO05D006603 1.5e-277 959.1 549 86.5
MSTRG.12985 Avicennia marina HOM05D004902 ORTHO05D006603 2.0e-277 958.7 552 85.9
Sopen07g033000 Solanum pennellii HOM05D004902 ORTHO05D006603 2.0e-277 958.7 560 84.6
CAN.G337.72 Capsicum annuum HOM05D004902 ORTHO05D006603 2.6e-277 958.4 560 85.2
Thecc.09G123200 Theobroma cacao HOM05D004902 ORTHO05D006603 4.5e-277 957.6 542 86.7
Potri.001G267400 Populus trichocarpa HOM05D004902 ORTHO05D006603 5.8e-277 957.2 551 85.5
Solyc07g064810.3 Solanum lycopersicum HOM05D004902 ORTHO05D006603 9.9e-277 956.4 560 84.5
Sed0009199 Sechium edule HOM05D004902 ORTHO05D006603 1.7e-276 955.7 557 84.6
Sc02g0003710 Simmondsia chinensis HOM05D004902 ORTHO05D006603 2.2e-276 955.3 534 87.8
PGSC0003DMG400022211 Solanum tuberosum HOM05D004902 ORTHO05D006603 2.9e-276 954.9 560 84.5
Lalb_Chr10g0107081 Lupinus albus HOM05D004902 ORTHO05D006603 8.4e-276 953.4 560 84.6
Duzib264G0382 Durio zibethinus HOM05D004902 ORTHO05D006603 1.9e-275 952.2 551 86.0
Hund26666 Selenicereus undatus HOM05D004902 ORTHO05D006603 7.1e-275 950.3 587 82.1
Potri.009G061700 Populus trichocarpa HOM05D004902 ORTHO05D006603 6.0e-274 947.2 551 84.6
THA.LOC104811618 Tarenaya hassleriana HOM05D004902 ORTHO05D006603 7.9e-274 946.8 560 83.0
HanXRQChr05g0159411 Helianthus annuus HOM05D004902 ORTHO05D006603 1.0e-273 946.4 555 84.0
FAN18G4155 Fragaria x ananassa HOM05D004902 ORTHO05D006603 1.3e-273 946.0 557 84.9
Aa31LG3G11010 Aethionema arabicum HOM05D004902 ORTHO05D006603 1.8e-273 945.7 560 83.9
Lsat_1_v5_gn_5_3021 Lactuca sativa HOM05D004902 ORTHO05D006603 2.3e-273 945.3 552 84.4
Aqoxy5G00324 Aquilegia oxysepala HOM05D004902 ORTHO05D006603 3.0e-273 944.9 562 83.8
HanXRQChr08g0233501 Helianthus annuus HOM05D004902 ORTHO05D006603 8.7e-273 943.3 553 84.1
CARHR234510 Cardamine hirsuta HOM05D004902 ORTHO05D006603 1.9e-272 942.2 560 82.5
Carub.0007s1395 Capsella rubella HOM05D004902 ORTHO05D006603 4.3e-272 941.0 551 83.7
AL7G25950 Arabidopsis lyrata HOM05D004902 ORTHO05D006603 1.6e-271 939.1 551 83.5
ECA246G3742 Erigeron canadensis HOM05D004902 ORTHO05D006603 1.6e-271 939.1 548 85.2
FAN13G3021 Fragaria x ananassa HOM05D004902 ORTHO05D006603 2.8e-271 938.3 571 82.8
FAN04G1963 Fragaria x ananassa HOM05D004902 ORTHO05D006603 8.2e-271 936.8 581 82.4
Sp7g24850 Schrenkiella parvula HOM05D004902 ORTHO05D006603 1.1e-270 936.4 560 82.5
C04p45770 Brassica napus HOM05D004902 ORTHO05D006603 4.0e-270 934.5 560 82.3
Thhalv10024744m.g Eutrema salsugineum HOM05D004902 ORTHO05D006603 5.3e-270 934.1 553 82.6
CDE02G3624 Ceratophyllum demersum HOM05D004902 ORTHO05D006603 6.9e-270 933.7 541 84.5
AT4G26900 Arabidopsis thaliana HOM05D004902 ORTHO05D006603 9.0e-270 933.3 551 82.8
PGR083G1168 Punica granatum HOM05D004902 ORTHO05D006603 9.0e-270 933.3 552 84.4
C01p23080 Brassica napus HOM05D004902 ORTHO05D006603 1.2e-269 932.9 560 81.8
BolC4t26162H Brassica oleracea HOM05D004902 ORTHO05D006603 2.2e-268 928.7 562 82.0
BcaB06g27301 Brassica carinata HOM05D004902 ORTHO05D006603 2.9e-268 928.3 560 81.8
A04p12110 Brassica napus HOM05D004902 ORTHO05D006603 3.8e-268 927.9 564 81.6
COL.COLO4_19537 Corchorus olitorius HOM05D004902 ORTHO05D006603 6.5e-268 927.2 542 84.5
BolC1t02242H Brassica oleracea HOM05D004902 ORTHO05D006603 4.2e-267 924.5 562 81.1
Nn8g38868 Nelumbo nucifera HOM05D004902 ORTHO05D006603 2.1e-266 922.2 533 85.7
ATR0736G184 Amborella trichopoda HOM05D004902 ORTHO05D006603 3.5e-266 921.4 543 84.9
Oeu013136.2 Olea europaea HOM05D004902 ORTHO05D006603 3.5e-266 921.4 601 79.2
Rhsim06G0219700 Rhododendron simsii HOM05D004902 ORTHO05D006603 1.3e-265 919.5 576 79.9
EL10Ac1g01638 Beta vulgaris HOM05D004902 ORTHO05D006603 2.4e-262 908.7 555 81.1
BcaNung03568 Brassica carinata HOM05D004902 ORTHO05D006603 4.1e-262 907.9 560 80.4
BraA04t16876Z Brassica rapa HOM05D004902 ORTHO05D006603 1.7e-260 902.5 592 77.9
AUR62026758 Chenopodium quinoa HOM05D004902 ORTHO05D006603 5.0e-260 901.0 574 79.3
Gorai.011G209600 Gossypium raimondii HOM05D004902 ORTHO05D006603 6.5e-260 900.6 562 81.3
Haze_09705 Corylus avellana HOM05D004902 ORTHO05D006603 1.6e-258 896.0 594 77.8
Gohir.D10G186800 Gossypium hirsutum HOM05D004902 ORTHO05D006603 6.1e-258 894.0 562 80.8
vmacro02220 Vaccinium macrocarpon HOM05D004902 ORTHO05D006603 8.8e-257 890.2 602 76.7
FAN08G0007 Fragaria x ananassa HOM05D004902 ORTHO05D006603 5.0e-252 874.4 549 80.9
Os03g0256400 Oryza sativa ssp. japonica HOM05D004902 ORTHO05D006603 3.2e-251 871.7 547 77.7
HPP92_013494 Vanilla planifolia HOM05D004902 ORTHO05D006603 1.6e-250 869.4 548 77.7
PSO210G2842 Papaver somniferum HOM05D004902 ORTHO05D006603 8.8e-249 863.6 559 79.2
Sabra16G0163900 Salix brachista HOM05D004902 ORTHO05D006603 1.1e-248 863.2 616 72.6
HPP92_026047 Vanilla planifolia HOM05D004902 ORTHO05D006603 3.3e-248 861.7 542 78.2
PSO832G3378 Papaver somniferum HOM05D004902 ORTHO05D006603 5.7e-248 860.9 559 79.1
FvH4_5g29730 Fragaria vesca HOM05D004902 ORTHO05D006603 2.8e-247 858.6 479 88.1
Peaxi162Scf00235g00424 Petunia axillaris HOM05D004902 ORTHO05D006603 4.5e-245 851.3 576 76.4
Gohir.A10G179900 Gossypium hirsutum HOM05D004902 ORTHO05D006603 5.9e-245 850.9 577 76.6
CsaV3_7G021940 Cucumis sativus L. HOM05D004902 ORTHO05D006603 5.5e-243 844.3 520 81.0
Ah.13g076200 Amaranthus hybridus HOM05D004902 ORTHO05D006603 2.1e-242 842.4 555 77.5
AagrBONN_evm.TU.Sc2ySwM_117.3547 Anthoceros agrestis HOM05D004902 ORTHO05D006603 4.2e-235 818.1 551 72.8
Nitab4.5_0022774g0010 Nicotiana tabacum HOM05D004902 ORTHO05D006603 1.5e-232 809.7 463 85.5
Hma1.2p1_0036F.1_g023430 Hydrangea macrophylla HOM05D004902 ORTHO05D006603 1.1e-230 803.5 451 87.6
Mapoly0071s0086 Marchantia polymorpha HOM05D004902 ORTHO05D006603 7.0e-230 800.8 541 73.2
DCAR_022578 Daucus carota HOM05D004902 ORTHO05D006603 1.0e-228 797.0 551 74.6
Pp3c1_20280 Physcomitrium patens HOM05D004902 ORTHO05D006603 2.1e-226 789.3 551 72.1
SMO119G0352 Selaginella moellendorffii HOM05D004902 ORTHO05D006603 3.0e-225 785.4 533 73.2
CBR_g4356 Chara braunii HOM05D004902 ORTHO05D006603 1.7e-223 779.6 559 69.4
unitig_85.g27329 Utricularia gibba HOM05D004902 ORTHO05D006603 1.2e-213 746.9 525 72.6
AUR62013514 Chenopodium quinoa HOM05D004902 ORTHO05D006603 2.5e-211 739.2 560 69.6
CAN.G677.16 Capsicum annuum HOM05D004902 ORTHO05D006603 3.5e-197 692.2 553 67.6
Nitab4.5_0013139g0010 Nicotiana tabacum HOM05D004902 ORTHO05D006603 1.9e-195 686.4 405 84.7
MCO02G311 Micromonas commoda HOM05D004902 ORTHO05D006603 1.1e-187 660.6 559 60.5
HanXRQChr08g0233821 Helianthus annuus HOM05D004902 ORTHO05D006603 3.4e-168 595.9 409 75.8
MD11G1214000 Malus domestica HOM05D004902 ORTHO05D006603 7.1e-166 588.2 341 86.5
Zm00001eb011150 Zea mays HOM05D004902 ORTHO05D006603 4.3e-163 578.9 356 81.7
PRCOL_00006765 Prasinoderma coloniale HOM05D004902 ORTHO05D006603 3.7e-162 575.9 510 58.4
A01p18110 Brassica napus HOM05D004902 ORTHO05D006603 1.5e-160 570.5 554 58.3
Cfa025092 Carpinus fangiana HOM05D004902 ORTHO05D006603 1.8e-153 547.0 544 52.9
Cre11.g481500 Chlamydomonas reinhardtii HOM05D004902 ORTHO05D006603 8.5e-135 485.0 566 48.6
Cpa.g.sc12.277 Carica papaya HOM05D004902 ORTHO05D006603 5.7e-131 472.2 257 90.7
Cpa.g.c34168 Carica papaya HOM05D004902 ORTHO05D006603 2.7e-96 357.1 210 81.0
MD11G1213900 Malus domestica HOM05D004902 ORTHO05D006603 3.3e-94 350.1 188 86.7
Glyma.08G323300 Glycine max HOM05D004902 ORTHO05D006603 3.7e-74 283.5 208 67.8
Lsat_1_v5_gn_3_2301 Lactuca sativa HOM05D004902 ORTHO05D006603 1.1e-70 271.9 415 43.4
Zm00001eb081410 Zea mays HOM05D004902 ORTHO05D006603 4.2e-57 226.9 198 58.1
SEGI_16435 Sequoiadendron giganteum HOM05D004902 ORTHO05D006603 2.5e-46 191.0 116 81.9
VMungo0540G1125 Vigna mungo HOM05D004902 ORTHO05D006603 8.1e-45 186.0 112 83.0
RcHm_v2.0_Chr4g0412471 Rosa chinensis HOM05D004902 ORTHO05D006603 1.4e-44 185.3 153 64.7
BraA01t01766Z Brassica rapa HOM05D004902 ORTHO05D006603 1.9e-38 164.9 102 79.4
SEGI_31768 Sequoiadendron giganteum HOM05D004902 ORTHO05D006603 7.4e-38 162.9 118 64.4
Aqoxy84s005 Aquilegia oxysepala HOM05D004902 ORTHO05D038539 5.1e-31 140.2 314 33.1
Lsat_1_v5_gn_0_44000 Lactuca sativa HOM05D004902 ORTHO05D038539 4.8e-29 133.7 312 33.7
Glyma.08G319400 Glycine max HOM05D004902 ORTHO05D029739 3.4e-27 127.5 73 89.0
FvH4_6g25500 Fragaria vesca HOM05D000003 ORTHO05D000007 2.4e-20 104.8 58 87.9
BcaNung03560 Brassica carinata HOM05D004902 ORTHO05D006603 1.1e-17 95.9 57 78.9
TPR.G39977 Trifolium pratense HOM05D004902 ORTHO05D006603 7.4e-14 83.2 43 83.7
Ah.01g018890 Amaranthus hybridus HOM05D004902 ORTHO05D006603 9.7e-14 82.8 123 42.3
Lsat_1_v5_gn_3_69341 Lactuca sativa HOM05D004902 ORTHO05D006603 8.2e-13 79.7 126 41.3
Lsat_1_v5_gn_4_11281 Lactuca sativa HOM05D004902 ORTHO05D006603 5.3e-12 77.0 107 44.9
SEGI_35364 Sequoiadendron giganteum HOM05D004902 ORTHO05D025756 2.0e-11 75.1 45 71.1
HanXRQChr08g0233831 Helianthus annuus HOM05D004902 ORTHO05D006603 7.7e-11 73.2 42 81.0
TWI38G0888 Tripterygium wilfordii HOM05D004902 ORTHO05D029739 7.7e-11 73.2 73 63.0
GSVIVG01021644001 Vitis vinifera HOM05D004902 ORTHO05D024725 1.5e-09 68.9 35 82.9
BcaNung03565 Brassica carinata HOM05D004902 ORTHO05D006603 7.2e-09 66.6 58 62.1
RcHm_v2.0_Chr5g0040621 Rosa chinensis HOM05D004902 ORTHO05D006603 2.3e-07 61.6 37 81.1
Lsat_1_v5_gn_0_720 Lactuca sativa HOM05D004902 ORTHO05D029739 6.7e-07 60.1 55 60.0
Lsat_1_v5_gn_5_36061 Lactuca sativa HOM05D004902 ORTHO05D025756 2.6e-06 58.2 44 61.4
Lsat_1_v5_gn_2_18401 Lactuca sativa HOM05D004902 ORTHO05D233888 7.5e-06 56.6 112 36.6


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