Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007829 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 0.0e+00 1778.8 898 100.0
CSS0011617 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 0.0e+00 1776.5 898 99.9
Rhsim09G0125700 Rhododendron simsii HOM05D004942 ORTHO05D005687 7.5e-268 927.5 974 55.9
Dinv34045 Davidia involucrata HOM05D004942 ORTHO05D005687 1.0e-203 714.5 775 54.3
Hma1.2p1_2519F.1_g323790 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 1.8e-173 614.0 935 44.2
Hma1.2p1_0566F.1_g179990 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 9.1e-173 611.7 941 43.8
Cfa008858 Carpinus fangiana HOM05D004942 ORTHO05D005687 2.3e-160 570.5 960 40.3
Haze_11879 Corylus avellana HOM05D004942 ORTHO05D005687 8.8e-160 568.5 975 41.1
QL03p073561 Quercus lobata HOM05D004942 ORTHO05D005687 2.3e-152 543.9 964 41.4
GSVIVG01012245001 Vitis vinifera HOM05D004942 ORTHO05D005687 3.5e-140 503.4 911 40.6
Prupe.1G290000 Prunus persica HOM05D004942 ORTHO05D005687 5.1e-131 473.0 941 39.3
vmacro10441 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 7.3e-130 469.2 532 55.3
Manes.01G026200 Manihot esculenta HOM05D004942 ORTHO05D005687 4.7e-129 466.5 930 38.2
CiPaw.06G093500 Carya illinoinensis HOM05D004942 ORTHO05D005687 2.4e-128 464.2 940 38.3
Potri.008G097700 Populus trichocarpa HOM05D004942 ORTHO05D005687 7.1e-125 452.6 956 36.3
Thecc.02G326800 Theobroma cacao HOM05D004942 ORTHO05D005687 8.1e-121 439.1 962 36.8
MD16G1059100 Malus domestica HOM05D004942 ORTHO05D005687 2.0e-119 434.5 1062 33.4
vmacro10440 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 2.0e-119 434.5 360 61.1
Duzib251G0048 Durio zibethinus HOM05D004942 ORTHO05D005687 1.9e-117 427.9 972 36.0
Actinidia28654 Actinidia chinensis HOM05D004942 ORTHO05D005687 3.0e-115 420.6 652 41.9
Gorai.008G175800 Gossypium raimondii HOM05D004942 ORTHO05D005687 9.0e-112 409.1 955 36.0
RcHm_v2.0_Chr4g0437911 Rosa chinensis HOM05D004942 ORTHO05D005687 2.8e-105 387.5 982 33.2
Ciclev10033741m.g Citrus clementina HOM05D004942 ORTHO05D005687 3.1e-104 384.0 962 35.2
FAN22G2425 Fragaria x ananassa HOM05D004942 ORTHO05D005687 5.8e-103 379.8 974 33.4
Lj3A1029T37 Lonicera japonica HOM05D004942 ORTHO05D005687 2.2e-102 377.9 882 37.0
FAN07G2875 Fragaria x ananassa HOM05D004942 ORTHO05D005687 6.7e-99 366.3 989 32.6
Sabra08G0073900 Salix brachista HOM05D004942 ORTHO05D005687 4.8e-97 360.1 952 32.5
FvH4_4g29660 Fragaria vesca HOM05D004942 ORTHO05D005687 8.2e-97 359.4 964 33.5
Oeu020362.1 Olea europaea HOM05D004942 ORTHO05D005687 3.4e-95 354.0 920 32.4
Nitab4.5_0000027g0020 Nicotiana tabacum HOM05D004942 ORTHO05D005687 1.9e-93 348.2 913 33.3
FAN12G1725 Fragaria x ananassa HOM05D004942 ORTHO05D005687 2.1e-92 344.7 989 32.6
Peaxi162Scf00175g00531 Petunia axillaris HOM05D004942 ORTHO05D005687 3.5e-92 344.0 909 32.7
CANSAT64G2200 Cannabis sativa HOM05D004942 ORTHO05D005687 6.0e-92 343.2 933 32.0
Nn3g17507 Nelumbo nucifera HOM05D004942 ORTHO05D005687 1.0e-91 342.4 1107 30.0
Cpa.g.sc1669.1 Carica papaya HOM05D004942 ORTHO05D005687 8.7e-91 339.3 936 32.6
ECA234G0983 Erigeron canadensis HOM05D004942 ORTHO05D005687 8.7e-91 339.3 913 32.9
Nitab4.5_0003545g0010 Nicotiana tabacum HOM05D004942 ORTHO05D005687 8.2e-89 332.8 925 32.1
TWI79G0892 Tripterygium wilfordii HOM05D004942 ORTHO05D005687 1.8e-88 331.6 801 33.3
Sc04g0007460 Simmondsia chinensis HOM05D004942 ORTHO05D005687 6.9e-88 329.7 986 31.5
DCAR_023750 Daucus carota HOM05D004942 ORTHO05D005687 4.5e-87 327.0 943 32.2
Aqoxy3G00534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 2.9e-86 324.3 967 31.7
Aqoxy4G01534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 4.2e-85 320.5 979 30.7
Glyma.16G091700 Glycine max HOM05D004942 ORTHO05D005687 5.1e-83 313.5 930 29.5
Hund25161 Selenicereus undatus HOM05D004942 ORTHO05D005687 5.1e-83 313.5 930 30.2
Lalb_Chr09g0334721 Lupinus albus HOM05D004942 ORTHO05D005687 1.9e-82 311.6 946 30.1
Gohir.A12G159900 Gossypium hirsutum HOM05D004942 ORTHO05D005687 1.7e-81 308.5 681 35.7
VMungo0251G2230 Vigna mungo HOM05D004942 ORTHO05D005687 1.4e-80 305.4 900 29.3
Cc11_g11760 Coffea canephora HOM05D004942 ORTHO05D005687 4.1e-80 303.9 927 31.9
MBI16_g37883_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 4.1e-80 303.9 1251 27.5
Phvul.003G282800 Phaseolus vulgaris HOM05D004942 ORTHO05D005687 4.5e-79 300.4 917 28.8
Gohir.D12G163200 Gossypium hirsutum HOM05D004942 ORTHO05D005687 1.9e-77 295.0 710 34.2
PSO017G2640 Papaver somniferum HOM05D004942 ORTHO05D005687 1.9e-77 295.0 1031 28.2
PSO478G0521 Papaver somniferum HOM05D004942 ORTHO05D005687 3.2e-77 294.3 1026 27.4
CAN.G707.24 Capsicum annuum HOM05D004942 ORTHO05D005687 1.2e-76 292.4 903 31.5
Sopen05g006850 Solanum pennellii HOM05D004942 ORTHO05D005687 3.6e-76 290.8 900 31.7
Solyc05g012060.4 Solanum lycopersicum HOM05D004942 ORTHO05D005687 6.1e-76 290.0 900 31.0
HanXRQChr17g0568411 Helianthus annuus HOM05D004942 ORTHO05D005687 6.7e-75 286.6 902 29.9
Medtr8g066290 Medicago truncatula HOM05D004942 ORTHO05D005687 1.1e-74 285.8 942 27.9
TPR.G3371 Trifolium pratense HOM05D004942 ORTHO05D005687 7.4e-74 283.1 917 29.8
PGR031G3471 Punica granatum HOM05D004942 ORTHO05D005687 2.8e-73 281.2 922 30.0
Lj4g0014066 Lotus japonicus HOM05D004942 ORTHO05D005687 8.2e-73 279.6 930 29.6
Actinidia27213 Actinidia chinensis HOM05D004942 ORTHO05D005687 1.8e-72 278.5 313 53.4
Ca_22664_v3 Cicer arietinum L. HOM05D004942 ORTHO05D005687 1.5e-71 275.4 917 28.5
EL10Ac6g15023 Beta vulgaris HOM05D004942 ORTHO05D005687 6.5e-70 270.0 979 28.8
COL.COLO4_27850 Corchorus olitorius HOM05D004942 ORTHO05D005687 2.7e-68 264.6 918 29.1
Psat4g122040 Pisum sativum HOM05D004942 ORTHO05D005687 4.7e-68 263.8 939 27.1
THA.LOC104822000 Tarenaya hassleriana HOM05D004942 ORTHO05D005687 6.7e-67 260.0 938 27.9
TAR629G1003 Trochodendron aralioides HOM05D004942 ORTHO05D005687 4.4e-66 257.3 183 64.5
CsaV3_5G034290 Cucumis sativus L. HOM05D004942 ORTHO05D005687 1.3e-65 255.8 950 28.0
Migut.L01173 Erythranthe guttata HOM05D004942 ORTHO05D005687 1.3e-65 255.8 904 28.1
AT1G26330 Arabidopsis thaliana HOM05D004942 ORTHO05D005687 2.0e-63 248.4 916 28.5
Ah.03g138750 Amaranthus hybridus HOM05D004942 ORTHO05D005687 3.5e-63 247.7 956 27.2
CARHR025590 Cardamine hirsuta HOM05D004942 ORTHO05D005687 3.5e-63 247.7 914 27.8
AUR62007894 Chenopodium quinoa HOM05D004942 ORTHO05D005687 1.0e-62 246.1 1072 27.6
SGA_v2.0_scaffold16G07813 Striga asiatica HOM05D004942 ORTHO05D005687 1.0e-62 246.1 914 28.2
Aa31LG7G8720 Aethionema arabicum HOM05D004942 ORTHO05D005687 5.5e-61 240.4 943 27.1
ClCG05G022730 Citrullus lanatus HOM05D004942 ORTHO05D005687 1.2e-60 239.2 950 25.9
AL1G39420 Arabidopsis lyrata HOM05D004942 ORTHO05D005687 1.6e-60 238.8 924 27.9
Atru.chr11.1596 Acer truncatum HOM05D004942 ORTHO05D005687 8.0e-60 236.5 168 65.5
BraA09t39480Z Brassica rapa HOM05D004942 ORTHO05D005687 6.7e-59 233.4 1000 28.1
A09p39800 Brassica napus HOM05D004942 ORTHO05D005687 8.8e-59 233.0 1000 28.1
Sed0022979 Sechium edule HOM05D004942 ORTHO05D005687 1.2e-58 232.6 1001 25.6
AUR62003077 Chenopodium quinoa HOM05D004942 ORTHO05D005687 1.5e-58 232.3 360 38.6
MELO3C012244.2 Cucumis melo HOM05D004942 ORTHO05D005687 5.7e-58 230.3 978 26.5
Thhalv10006590m.g Eutrema salsugineum HOM05D004942 ORTHO05D005687 9.7e-58 229.6 922 28.1
Psat1g014920 Pisum sativum HOM05D004942 ORTHO05D005687 1.4e-56 225.7 713 28.8
Sp1g22360 Schrenkiella parvula HOM05D004942 ORTHO05D005687 7.0e-56 223.4 928 26.8
BcaC05g26421 Brassica carinata HOM05D004942 ORTHO05D005687 2.9e-54 218.0 993 27.0
C05p24600 Brassica napus HOM05D004942 ORTHO05D005687 3.8e-54 217.6 992 27.2
BolC5t31196H Brassica oleracea HOM05D004942 ORTHO05D005687 3.8e-54 217.6 992 27.2
TPR.G31932 Trifolium pratense HOM05D004942 ORTHO05D005687 1.1e-53 216.1 261 44.4
Migut.A01205 Erythranthe guttata HOM05D004942 ORTHO05D005687 4.0e-51 207.6 208 47.1
MBI16_g47660_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 5.2e-51 207.2 1161 26.7
SalBow2G1731 Salvia bowleyana HOM05D004942 ORTHO05D005687 1.5e-50 205.7 949 26.9
Lsat_1_v5_gn_4_11720 Lactuca sativa HOM05D004942 ORTHO05D005687 1.3e-49 202.6 936 25.6
Carub.0001s2467 Capsella rubella HOM05D004942 ORTHO05D005687 1.4e-48 199.1 917 26.5
Migut.A01186 Erythranthe guttata HOM05D004942 ORTHO05D005687 7.7e-47 193.4 221 43.9
BcaC05g26635 Brassica carinata HOM05D004942 ORTHO05D005687 5.0e-46 190.7 989 25.5
SHI10798 Sapria himalayana HOM05D004942 ORTHO05D005687 2.5e-45 188.3 203 45.8
CDE11G1026 Ceratophyllum demersum HOM05D004942 ORTHO05D005687 4.2e-45 187.6 462 29.7
ATR0827G101 Amborella trichopoda HOM05D004942 ORTHO05D005687 4.0e-43 181.0 183 44.8
Os09g0101800 Oryza sativa ssp. japonica HOM05D004942 ORTHO05D005687 1.1e-40 172.9 738 25.9
HPP92_000888 Vanilla planifolia HOM05D004942 ORTHO05D005687 1.1e-37 162.9 713 25.1
Atru.chr11.1595 Acer truncatum HOM05D004942 ORTHO05D005687 1.5e-37 162.5 537 31.3
Zm00001eb095700 Zea mays HOM05D004942 ORTHO05D005687 2.1e-36 158.7 183 40.4
TAR629G1720 Trochodendron aralioides HOM05D004942 ORTHO05D005687 5.8e-34 150.6 257 42.0
Actinidia27212 Actinidia chinensis HOM05D004942 ORTHO05D005687 8.3e-25 120.2 95 68.4
Actinidia28653 Actinidia chinensis HOM05D004942 ORTHO05D005687 6.6e-22 110.5 97 66.0
Actinidia16149 Actinidia chinensis HOM05D057958 ORTHO05D005687 1.1e-21 109.8 134 50.0
Actinidia26534 Actinidia chinensis HOM05D057958 ORTHO05D005687 1.1e-21 109.8 134 50.0
TPR.G31934 Trifolium pratense HOM05D004942 ORTHO05D005687 9.9e-18 96.7 356 30.9
unitig_26.g10284 Utricularia gibba HOM05D004942 ORTHO05D005687 6.4e-17 94.0 124 39.5
TAR629G0168 Trochodendron aralioides HOM05D004942 ORTHO05D005687 1.9e-16 92.4 214 39.3
Oeu028721.1 Olea europaea HOM05D004942 ORTHO05D005687 2.3e-14 85.5 114 50.0
Gohir.A12G159850 Gossypium hirsutum HOM05D004942 ORTHO05D005687 9.9e-10 70.1 159 38.4
Oeu028720.1 Olea europaea HOM05D004942 ORTHO05D005687 4.9e-09 67.8 247 28.3
Mapoly0001s0391 Marchantia polymorpha HOM05D004942 ORTHO05D005687 3.5e-07 61.6 171 25.7
Aqoxy2G01048 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 2.3e-06 58.9 184 31.0


User provided reference genes

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