Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007825 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D012493 1.0e-88 330.1 170 100.0
Rhsim12G0069100 Rhododendron simsii HOM05D000312 ORTHO05D000221 1.4e-26 123.6 191 41.4
Rhsim12G0069400 Rhododendron simsii HOM05D000312 ORTHO05D000221 1.1e-23 114.0 102 56.9
Rhsim12G0068200 Rhododendron simsii HOM05D000312 ORTHO05D000221 6.4e-19 98.2 159 44.0
Rhsim12G0069300 Rhododendron simsii HOM05D000312 ORTHO05D000221 1.1e-18 97.4 176 35.2
Rhsim12G0069200 Rhododendron simsii HOM05D000312 ORTHO05D012493 3.3e-15 85.9 67 59.7
CSS0000659 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 2.7e-09 66.2 147 32.7
Nitab4.5_0002548g0030 Nicotiana tabacum HOM05D000312 ORTHO05D000221 3.5e-09 65.9 84 40.5
Nitab4.5_0006592g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 3.5e-09 65.9 97 41.2
Actinidia24036 Actinidia chinensis HOM05D000312 ORTHO05D000221 4.6e-09 65.5 99 37.4
Dinv27407 Davidia involucrata HOM05D000312 ORTHO05D000221 3.0e-08 62.8 180 26.7
Actinidia19893 Actinidia chinensis HOM05D000312 ORTHO05D000221 3.9e-08 62.4 86 39.5
CAN.G222.77 Capsicum annuum HOM05D000312 ORTHO05D000221 3.9e-08 62.4 87 39.1
Nitab4.5_0000027g0320 Nicotiana tabacum HOM05D000312 ORTHO05D000221 6.7e-08 61.6 95 37.9
QL03p046842 Quercus lobata HOM05D000312 ORTHO05D000221 6.7e-08 61.6 62 48.4
GSVIVG01010161001 Vitis vinifera HOM05D000312 ORTHO05D000221 8.7e-08 61.2 153 27.5
MSTRG.11841 Avicennia marina HOM05D000312 ORTHO05D000221 1.9e-07 60.1 118 35.6
PGSC0003DMG400020354 Solanum tuberosum HOM05D000312 ORTHO05D000221 1.9e-07 60.1 87 36.8
Hma1.2p1_0189F.1_g082890 Hydrangea macrophylla HOM05D000312 ORTHO05D000221 2.5e-07 59.7 98 34.7
Hma1.2p1_0189F.1_g082900 Hydrangea macrophylla HOM05D000312 ORTHO05D000221 4.3e-07 58.9 99 33.3
PGSC0003DMG400039136 Solanum tuberosum HOM05D000312 ORTHO05D014151 4.3e-07 58.9 97 32.0
MSTRG.24393 Avicennia marina HOM05D000312 ORTHO05D000221 5.6e-07 58.5 80 40.0
Dinv16567 Davidia involucrata HOM05D000312 ORTHO05D000221 5.6e-07 58.5 66 40.9
Thecc.04G113700 Theobroma cacao HOM05D000312 ORTHO05D000221 9.6e-07 57.8 108 28.7
Migut.A00500 Erythranthe guttata HOM05D000312 ORTHO05D000221 1.6e-06 57.0 96 36.5
Oeu044969.1 Olea europaea HOM05D000312 ORTHO05D000221 1.6e-06 57.0 74 47.3
Rhsim12G0067900 Rhododendron simsii HOM05D000312 ORTHO05D000221 1.6e-06 57.0 82 40.2
CAN.G184.29 Capsicum annuum HOM05D000312 ORTHO05D000221 2.1e-06 56.6 104 35.6
CAN.G222.74 Capsicum annuum HOM05D000312 ORTHO05D020289 2.1e-06 56.6 87 32.2
Solyc04g005890.3 Solanum lycopersicum HOM05D000312 ORTHO05D000221 2.8e-06 56.2 85 38.8
Oeu023067.1 Olea europaea HOM05D000312 ORTHO05D000221 6.2e-06 55.1 65 49.2
Oeu040176.1 Olea europaea HOM05D000312 ORTHO05D000221 6.2e-06 55.1 65 46.2
SGA_v2.0_scaffold27G11722 Striga asiatica HOM05D000312 ORTHO05D000221 6.2e-06 55.1 88 39.8


User provided reference genes

Program Settings