Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007820 Camellia sinensis var. sinensis HOM05D008139 ORTHO05D009872 4.1e-47 191.0 97 100.0
CSS0007440 Camellia sinensis var. sinensis HOM05D008139 ORTHO05D009872 2.2e-32 142.1 93 78.5
Rhsim06G0158900 Rhododendron simsii HOM05D008139 ORTHO05D009872 2.8e-27 125.2 92 70.7
Dinv02745 Davidia involucrata HOM05D008139 ORTHO05D009872 8.1e-27 123.6 86 74.4
Hma1.2p1_0249F.1_g102430 Hydrangea macrophylla HOM05D008139 ORTHO05D009872 2.0e-25 119.0 94 67.0
Lsat_1_v5_gn_5_103860 Lactuca sativa HOM05D008139 ORTHO05D009872 1.3e-21 106.3 93 62.4
Prupe.3G131300 Prunus persica HOM05D008139 ORTHO05D009872 1.3e-21 106.3 97 57.7
DCAR_019772 Daucus carota HOM05D008139 ORTHO05D009872 2.3e-21 105.5 89 65.2
Potri.017G037500 Populus trichocarpa HOM05D008139 ORTHO05D009872 3.0e-21 105.1 89 65.2
Cfa014432 Carpinus fangiana HOM05D008139 ORTHO05D009872 5.1e-21 104.4 91 59.3
Potri.007G122500 Populus trichocarpa HOM05D008139 ORTHO05D009872 5.1e-21 104.4 91 62.6
Cc10_g03180 Coffea canephora HOM05D008139 ORTHO05D009872 8.7e-21 103.6 82 61.0
QL08p033688 Quercus lobata HOM05D008139 ORTHO05D009872 2.5e-20 102.1 85 64.7
TWI36G0135 Tripterygium wilfordii HOM05D008139 ORTHO05D009872 2.5e-20 102.1 97 57.7
Nn1g07030 Nelumbo nucifera HOM05D008139 ORTHO05D009872 4.3e-20 101.3 97 56.7
TAR626G0589 Trochodendron aralioides HOM05D008139 ORTHO05D009872 4.3e-20 101.3 93 57.0
TAR626G0598 Trochodendron aralioides HOM05D008139 ORTHO05D009872 9.6e-20 100.1 93 58.1
Ciclev10017826m.g Citrus clementina HOM05D008139 ORTHO05D009872 1.3e-19 99.8 91 58.2
Lsat_1_v5_gn_8_128280 Lactuca sativa HOM05D008139 ORTHO05D009872 2.8e-19 98.6 80 67.5
MD07G1098300 Malus domestica HOM05D008139 ORTHO05D009872 3.7e-19 98.2 91 59.3
Lj3g0004995 Lotus japonicus HOM05D008139 ORTHO05D009872 4.8e-19 97.8 95 54.7
Manes.13G103000 Manihot esculenta HOM05D008139 ORTHO05D009872 8.2e-19 97.1 88 59.1
Sabra17G0024400 Salix brachista HOM05D008139 ORTHO05D009872 1.1e-18 96.7 88 56.8
FAN02G4280 Fragaria x ananassa HOM05D008139 ORTHO05D009872 3.1e-18 95.1 87 57.5
Prupe.2G122300 Prunus persica HOM05D008139 ORTHO05D009872 3.1e-18 95.1 91 54.9
RcHm_v2.0_Chr2g0126901 Rosa chinensis HOM05D008139 ORTHO05D009872 3.1e-18 95.1 90 54.4
CiPaw.04G117200 Carya illinoinensis HOM05D008139 ORTHO05D009872 5.3e-18 94.4 93 54.8
Lalb_Chr03g0028851 Lupinus albus HOM05D008139 ORTHO05D009872 9.0e-18 93.6 94 53.2
TWI75G0563 Tripterygium wilfordii HOM05D008139 ORTHO05D009872 2.0e-17 92.4 95 53.7
Aqoxy4G01991 Aquilegia oxysepala HOM05D008139 ORTHO05D009872 2.6e-17 92.0 96 49.0
Thecc.04G120400 Theobroma cacao HOM05D008139 ORTHO05D009872 5.8e-17 90.9 91 53.8
Phvul.011G105800 Phaseolus vulgaris HOM05D008139 ORTHO05D009872 6.5e-16 87.4 94 50.0
Glyma.12G100900 Glycine max HOM05D008139 ORTHO05D009872 1.1e-15 86.7 97 49.5
Migut.C00700 Erythranthe guttata HOM05D008139 ORTHO05D009872 1.4e-15 86.3 87 48.3
Duzib133G0708 Durio zibethinus HOM05D008139 ORTHO05D009872 2.5e-15 85.5 99 50.5
Sed0019249 Sechium edule HOM05D008139 ORTHO05D009872 2.5e-15 85.5 87 48.3
Medtr4g046720 Medicago truncatula HOM05D008139 ORTHO05D009872 3.2e-15 85.1 93 50.5
Migut.N00505 Erythranthe guttata HOM05D008139 ORTHO05D009872 4.2e-15 84.7 96 49.0
ClCG02G001810 Citrullus lanatus HOM05D008139 ORTHO05D009872 5.5e-15 84.3 87 48.3
Nitab4.5_0003246g0060 Nicotiana tabacum HOM05D008139 ORTHO05D009872 5.5e-15 84.3 87 52.9
PGSC0003DMG400045933 Solanum tuberosum HOM05D008139 ORTHO05D009872 5.5e-15 84.3 76 55.3
CAN.G1126.30 Capsicum annuum HOM05D008139 ORTHO05D009872 9.3e-15 83.6 87 51.7
CAN.G1139.6 Capsicum annuum HOM05D008139 ORTHO05D009872 1.6e-14 82.8 86 53.5
Peaxi162Scf00057g00045 Petunia axillaris HOM05D008139 ORTHO05D009872 2.1e-14 82.4 89 53.9
Solyc12g089070.1 Solanum lycopersicum HOM05D008139 ORTHO05D009872 2.1e-14 82.4 87 49.4
Gohir.D11G168166 Gossypium hirsutum HOM05D008139 ORTHO05D009872 3.5e-14 81.6 96 46.9
Gorai.007G179600 Gossypium raimondii HOM05D008139 ORTHO05D009872 3.5e-14 81.6 96 46.9
Nitab4.5_0000790g0110 Nicotiana tabacum HOM05D008139 ORTHO05D009872 4.6e-14 81.3 96 47.9
TPR.G19049 Trifolium pratense HOM05D008139 ORTHO05D009872 4.6e-14 81.3 85 51.8
SalBow8G2406 Salvia bowleyana HOM05D008139 ORTHO05D009872 6.0e-14 80.9 93 47.3
SalBow8G2479 Salvia bowleyana HOM05D008139 ORTHO05D009872 6.0e-14 80.9 93 47.3
Atru.chr6.3155 Acer truncatum HOM05D008139 ORTHO05D009872 1.3e-13 79.7 89 48.3
Gohir.A11G161900 Gossypium hirsutum HOM05D008139 ORTHO05D009872 1.3e-13 79.7 92 47.8
Nitab4.5_0000110g0510 Nicotiana tabacum HOM05D008139 ORTHO05D009872 1.3e-13 79.7 86 51.2
Atru.chr6.3157 Acer truncatum HOM05D008139 ORTHO05D009872 3.9e-13 78.2 96 45.8
SGA_v2.0_scaffold48G18067 Striga asiatica HOM05D008139 ORTHO05D009872 3.9e-13 78.2 85 48.2
COL.COLO4_15724 Corchorus olitorius HOM05D008139 ORTHO05D009872 1.5e-12 76.3 78 47.4
CsaV3_7G003730 Cucumis sativus L. HOM05D008139 ORTHO05D009872 1.5e-12 76.3 90 44.4
PGR083G1842 Punica granatum HOM05D008139 ORTHO05D009872 1.9e-12 75.9 90 48.9
MELO3C018806.2 Cucumis melo HOM05D008139 ORTHO05D009872 2.5e-12 75.5 88 44.3
PGSC0003DMG400005169 Solanum tuberosum HOM05D008139 ORTHO05D009872 3.3e-12 75.1 86 48.8
Nitab4.5_0002296g0050 Nicotiana tabacum HOM05D008139 ORTHO05D009872 1.3e-11 73.2 78 52.6
SGA_v2.0_scaffold374G50235 Striga asiatica HOM05D008139 ORTHO05D009872 1.3e-11 73.2 80 47.5
THA.LOC104816105 Tarenaya hassleriana HOM05D011011 ORTHO05D009872 1.6e-11 72.8 95 46.3
Solyc04g080070.1 Solanum lycopersicum HOM05D008139 ORTHO05D009872 2.8e-11 72.0 86 46.5
Sopen04g033660 Solanum pennellii HOM05D008139 ORTHO05D009872 2.8e-11 72.0 86 46.5
Eucgr.A01721 Eucalyptus grandis HOM05D008139 ORTHO05D009872 6.3e-11 70.9 87 46.0
Potri.017G037400 Populus trichocarpa HOM05D008139 ORTHO05D009872 1.1e-10 70.1 53 66.0
unitig_46.g17928 Utricularia gibba HOM05D008139 ORTHO05D009872 1.4e-10 69.7 98 37.8
BcaC02g07938 Brassica carinata HOM05D011011 ORTHO05D009872 2.6e-09 65.5 89 43.8
BolC4t27657H Brassica oleracea HOM05D011011 ORTHO05D009872 3.4e-09 65.1 89 43.8
TAR626G1168 Trochodendron aralioides HOM05D008139 ORTHO05D009872 3.4e-09 65.1 82 46.3
C04p61740 Brassica napus HOM05D011011 ORTHO05D009872 1.3e-08 63.2 89 42.7
CARHR126180 Cardamine hirsuta HOM05D011011 ORTHO05D009872 1.7e-08 62.8 77 44.2
AL4G27740 Arabidopsis lyrata HOM05D011011 ORTHO05D009872 3.2e-07 58.5 77 42.9
BcaB06g28588 Brassica carinata HOM05D011011 ORTHO05D009872 4.2e-07 58.2 77 44.2
BcaB01g03981 Brassica carinata HOM05D011011 ORTHO05D009872 7.2e-07 57.4 78 42.3
BolC3t14501H Brassica oleracea HOM05D011011 ORTHO05D009872 9.3e-07 57.0 78 39.7
AT2G32360 Arabidopsis thaliana HOM05D011011 ORTHO05D009872 1.2e-06 56.6 77 40.3
Carub.0004s1371 Capsella rubella HOM05D011011 ORTHO05D009872 1.2e-06 56.6 77 44.2
Sp4g14730 Schrenkiella parvula HOM05D011011 ORTHO05D009872 1.2e-06 56.6 77 40.3
AL125U10020 Arabidopsis lyrata HOM05D011011 ORTHO05D009872 1.6e-06 56.2 77 41.6
BcaB01g03982 Brassica carinata HOM05D011011 ORTHO05D009872 4.6e-06 54.7 78 38.5
BcaC01g05908 Brassica carinata HOM05D011011 ORTHO05D009872 4.6e-06 54.7 78 38.5
C03p21180 Brassica napus HOM05D011011 ORTHO05D009872 4.6e-06 54.7 78 38.5


User provided reference genes

Program Settings