Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007807 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 1.6e-85 319.3 158 100.0
CSS0046492 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 6.3e-85 317.4 158 99.4
Cfa000759 Carpinus fangiana HOM05D001299 ORTHO05D009516 4.0e-55 218.4 204 56.9
TAR626G1915 Trochodendron aralioides HOM05D001299 ORTHO05D009516 8.8e-55 217.2 211 56.4
Actinidia32353 Actinidia chinensis HOM05D001299 ORTHO05D009516 2.0e-54 216.1 201 58.7
Haze_05959 Corylus avellana HOM05D001299 ORTHO05D009516 9.7e-54 213.8 212 53.8
Sed0008848 Sechium edule HOM05D001299 ORTHO05D009516 2.4e-52 209.1 211 55.0
GSVIVG01037941001 Vitis vinifera HOM05D001299 ORTHO05D009516 5.3e-52 208.0 207 55.1
Potri.011G155500 Populus trichocarpa HOM05D001299 ORTHO05D009516 9.1e-52 207.2 211 54.0
Thecc.06G007400 Theobroma cacao HOM05D001299 ORTHO05D009516 1.6e-51 206.5 211 53.1
Lj6g0006807 Lotus japonicus HOM05D001299 ORTHO05D009516 3.5e-51 205.3 211 53.6
COL.COLO4_26895 Corchorus olitorius HOM05D001299 ORTHO05D009516 4.5e-51 204.9 211 53.6
Medtr2g032540 Medicago truncatula HOM05D001299 ORTHO05D009516 4.5e-51 204.9 211 54.0
MBI18_g26477_MAGBIO Magnolia biondii HOM05D001299 ORTHO05D009516 1.3e-50 203.4 207 54.1
ClCG01G008880 Citrullus lanatus HOM05D001299 ORTHO05D009516 1.7e-50 203.0 201 53.7
Phvul.006G122300 Phaseolus vulgaris HOM05D001299 ORTHO05D009516 1.7e-50 203.0 211 53.6
FvH4_3g11560 Fragaria vesca HOM05D001299 ORTHO05D009516 2.2e-50 202.6 211 50.7
FAN16G0158 Fragaria x ananassa HOM05D001299 ORTHO05D009516 2.2e-50 202.6 211 50.7
Sabra11G0144300 Salix brachista HOM05D001299 ORTHO05D009516 2.9e-50 202.2 211 53.6
Solyc02g069620.4 Solanum lycopersicum HOM05D001299 ORTHO05D009516 2.9e-50 202.2 211 51.7
RcHm_v2.0_Chr5g0018511 Rosa chinensis HOM05D001299 ORTHO05D009516 5.0e-50 201.4 211 51.2
VMungo0540G0517 Vigna mungo HOM05D001299 ORTHO05D009516 5.0e-50 201.4 211 52.6
FAN25G0007 Fragaria x ananassa HOM05D001299 ORTHO05D009516 6.5e-50 201.1 211 50.7
Nn7g37865 Nelumbo nucifera HOM05D001299 ORTHO05D009516 8.5e-50 200.7 211 51.2
CANSAT35G1957 Cannabis sativa HOM05D001299 ORTHO05D009516 1.1e-49 200.3 200 55.0
Cc09_g07140 Coffea canephora HOM05D001299 ORTHO05D009516 1.9e-49 199.5 205 51.2
Sopen02g018750 Solanum pennellii HOM05D001299 ORTHO05D009516 1.9e-49 199.5 211 51.2
CAN.G675.34 Capsicum annuum HOM05D001299 ORTHO05D009516 2.5e-49 199.1 201 53.2
Ca_00935_v3 Cicer arietinum L. HOM05D001299 ORTHO05D009516 2.5e-49 199.1 211 53.1
FAN21G1530 Fragaria x ananassa HOM05D001299 ORTHO05D009516 2.5e-49 199.1 211 50.2
Glyma.15G136200 Glycine max HOM05D001299 ORTHO05D009516 2.5e-49 199.1 211 52.1
Lj1A1156T42 Lonicera japonica HOM05D001299 ORTHO05D009516 3.2e-49 198.7 201 53.7
Lalb_Chr15g0089001 Lupinus albus HOM05D001299 ORTHO05D009516 5.5e-49 198.0 214 51.4
CSS0034631 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 7.2e-49 197.6 170 65.3
Eucgr.D01028 Eucalyptus grandis HOM05D001299 ORTHO05D009516 9.4e-49 197.2 211 49.8
Psat1g163720 Pisum sativum HOM05D001299 ORTHO05D009516 1.6e-48 196.4 211 52.6
MSTRG.16317 Avicennia marina HOM05D001299 ORTHO05D009516 2.1e-48 196.1 211 49.8
MELO3C021811.2 Cucumis melo HOM05D001299 ORTHO05D009516 4.7e-48 194.9 236 47.9
Duzib235G0189 Durio zibethinus HOM05D001299 ORTHO05D009516 6.1e-48 194.5 211 51.2
SalBow8G0840 Salvia bowleyana HOM05D001299 ORTHO05D009516 6.1e-48 194.5 211 49.8
SalBow8G5388 Salvia bowleyana HOM05D001299 ORTHO05D009516 6.1e-48 194.5 211 49.8
Gorai.010G142100 Gossypium raimondii HOM05D001299 ORTHO05D009516 8.0e-48 194.1 211 50.2
Gohir.D06G121900 Gossypium hirsutum HOM05D001299 ORTHO05D009516 1.0e-47 193.7 211 50.2
Manes.03G067266 Manihot esculenta HOM05D001299 ORTHO05D009516 1.0e-47 193.7 212 50.9
arahy.Tifrunner.gnm1.ann1.85QD0P Arachis hypogaea HOM05D001299 ORTHO05D009516 1.4e-47 193.4 211 51.2
MD10G1240700 Malus domestica HOM05D001299 ORTHO05D009516 1.4e-47 193.4 211 49.3
arahy.Tifrunner.gnm1.ann1.ZN1LAP Arachis hypogaea HOM05D001299 ORTHO05D009516 2.3e-47 192.6 201 53.2
Migut.M01940 Erythranthe guttata HOM05D001299 ORTHO05D009516 2.3e-47 192.6 212 51.4
TPR.G15970 Trifolium pratense HOM05D001299 ORTHO05D009516 3.0e-47 192.2 211 51.7
THA.LOC104806244 Tarenaya hassleriana HOM05D001299 ORTHO05D009516 4.0e-47 191.8 199 51.3
Prupe.4G102900 Prunus persica HOM05D001299 ORTHO05D009516 5.2e-47 191.4 211 49.3
Nitab4.5_0010415g0020 Nicotiana tabacum HOM05D001299 ORTHO05D009516 6.8e-47 191.0 240 47.1
Lsat_1_v5_gn_1_130040 Lactuca sativa HOM05D001299 ORTHO05D009516 1.2e-46 190.3 213 49.8
Nitab4.5_0007613g0040 Nicotiana tabacum HOM05D001299 ORTHO05D009516 1.2e-46 190.3 240 46.2
Atru.chr10.662 Acer truncatum HOM05D001299 ORTHO05D009516 2.6e-46 189.1 212 50.0
HanXRQChr11g0341271 Helianthus annuus HOM05D001299 ORTHO05D009516 2.2e-45 186.0 211 48.8
PGSC0003DMG400021135 Solanum tuberosum HOM05D001299 ORTHO05D009516 8.3e-45 184.1 231 46.3
ATR1098G024 Amborella trichopoda HOM05D001299 ORTHO05D009516 2.4e-44 182.6 205 48.8
A06p47140 Brassica napus HOM05D001299 ORTHO05D009516 3.1e-44 182.2 202 48.0
Aa31LG9G8690 Aethionema arabicum HOM05D001299 ORTHO05D009516 5.4e-44 181.4 202 48.5
CsaV3_1G037750 Cucumis sativus L. HOM05D001299 ORTHO05D009516 7.0e-44 181.0 186 53.2
TWI38G0147 Tripterygium wilfordii HOM05D001299 ORTHO05D009516 7.0e-44 181.0 211 46.4
BcaC06g34545 Brassica carinata HOM05D001299 ORTHO05D009516 1.6e-43 179.9 203 47.8
BcaC06g31610 Brassica carinata HOM05D001299 ORTHO05D009516 2.7e-43 179.1 202 47.0
Sp2g09310 Schrenkiella parvula HOM05D001299 ORTHO05D009516 2.7e-43 179.1 202 47.5
BraA06t27586Z Brassica rapa HOM05D001299 ORTHO05D009516 5.9e-43 177.9 210 46.2
CSS0009698 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 5.9e-43 177.9 161 61.5
Os03g0781400 Oryza sativa ssp. japonica HOM05D001299 ORTHO05D009516 7.7e-43 177.6 216 47.2
C07p27350 Brassica napus HOM05D001299 ORTHO05D009516 1.0e-42 177.2 210 46.2
BolC7t43265H Brassica oleracea HOM05D001299 ORTHO05D009516 1.0e-42 177.2 210 46.2
CSS0019604 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 1.0e-42 177.2 181 56.9
CSS0007995 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 1.3e-42 176.8 160 61.2
Thhalv10000979m.g Eutrema salsugineum HOM05D001299 ORTHO05D009516 1.7e-42 176.4 202 47.0
Cpa.g.sc285.1 Carica papaya HOM05D001299 ORTHO05D009516 2.2e-42 176.0 212 50.0
AL8G15300 Arabidopsis lyrata HOM05D001299 ORTHO05D009516 6.5e-42 174.5 202 45.0
Carub.0008s0398 Capsella rubella HOM05D001299 ORTHO05D009516 1.9e-41 172.9 202 47.0
CSS0011897 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 3.2e-41 172.2 161 59.6
AT5G44520 Arabidopsis thaliana HOM05D001299 ORTHO05D009516 2.7e-40 169.1 202 44.6
Peaxi162Scf00195g00521 Petunia axillaris HOM05D001299 ORTHO05D009516 2.2e-37 159.5 223 43.0
MBI18_g14310_MAGBIO Magnolia biondii HOM05D001299 ORTHO05D009516 2.8e-37 159.1 167 52.1
Pp3c16_13350 Physcomitrium patens HOM05D001299 ORTHO05D009516 8.6e-34 147.5 201 40.8
CiPaw.10G111000 Carya illinoinensis HOM05D001299 ORTHO05D009516 1.1e-33 147.1 96 71.9
SGA_v2.0_scaffold298G47639 Striga asiatica HOM05D001299 ORTHO05D009516 1.5e-33 146.7 97 68.0
Ciclev10015984m.g Citrus clementina HOM05D001299 ORTHO05D009516 1.0e-31 140.6 97 64.9
CSS0023575 Camellia sinensis var. sinensis HOM05D001299 ORTHO05D009516 4.9e-29 131.7 174 47.7
Glyma.09G030500 Glycine max HOM05D001299 ORTHO05D009516 9.5e-25 117.5 83 63.9
Gohir.A06G118100 Gossypium hirsutum HOM05D001299 ORTHO05D009516 1.9e-20 103.2 145 44.1
CDE03G0248 Ceratophyllum demersum HOM05D001299 ORTHO05D009516 3.0e-18 95.9 145 40.7
QL05p065109 Quercus lobata HOM05D001299 ORTHO05D009516 1.6e-16 90.1 59 76.3
Oeu063345.2 Olea europaea HOM05D001299 ORTHO05D009516 1.1e-15 87.4 61 75.4
PRCOL_00006791 Prasinoderma coloniale HOM05D001299 ORTHO05D009516 1.4e-15 87.0 114 39.5
Cre07.g314600 Chlamydomonas reinhardtii HOM05D001299 ORTHO05D009516 1.5e-14 83.6 211 29.4
Lsat_1_v5_gn_3_11400 Lactuca sativa HOM05D003461 ORTHO05D004386 7.5e-14 81.3 45 77.8
MCO05G574 Micromonas commoda HOM05D001299 ORTHO05D009516 2.1e-11 73.2 108 37.0
Pp3c16_10280 Physcomitrium patens HOM05D001299 ORTHO05D001985 1.3e-10 70.5 203 27.6
CARHR178590 Cardamine hirsuta HOM05D001299 ORTHO05D009516 2.3e-10 69.7 59 55.9
Lj6g0028150 Lotus japonicus HOM05D001299 ORTHO05D009516 2.3e-10 69.7 98 45.9
Pp3c5_830 Physcomitrium patens HOM05D001299 ORTHO05D009516 3.0e-10 69.3 152 34.2
Pp3c5_21490 Physcomitrium patens HOM05D001299 ORTHO05D001985 5.1e-10 68.6 203 27.1
CBR_g39237 Chara braunii HOM05D001299 ORTHO05D001985 1.5e-09 67.0 199 28.1
ATR0665G255 Amborella trichopoda HOM05D001299 ORTHO05D001985 2.5e-09 66.2 199 28.1
SMO367G0722 Selaginella moellendorffii HOM05D001299 ORTHO05D001985 2.5e-09 66.2 194 26.8
ATR0763G220 Amborella trichopoda HOM05D001299 ORTHO05D001985 3.3e-09 65.9 199 28.1
MCO09G104 Micromonas commoda HOM05D001299 ORTHO05D001985 3.3e-09 65.9 198 27.8
Mapoly0213s0005 Marchantia polymorpha HOM05D001299 ORTHO05D001985 4.3e-09 65.5 203 25.6
CBR_g28662 Chara braunii HOM05D001299 ORTHO05D001985 1.6e-08 63.5 199 27.6
CDE10G0303 Ceratophyllum demersum HOM05D001299 ORTHO05D001985 2.8e-08 62.8 174 27.0
Zm00001eb213570 Zea mays HOM05D001299 ORTHO05D009516 2.8e-08 62.8 58 58.6
Potri.001G225700 Populus trichocarpa HOM05D001299 ORTHO05D001985 6.2e-08 61.6 199 25.6
Manes.02G135000 Manihot esculenta HOM05D001299 ORTHO05D001985 8.1e-08 61.2 198 24.7
CBR_g50124 Chara braunii HOM05D001299 ORTHO05D001985 1.1e-07 60.8 199 25.1
Nn7g36808 Nelumbo nucifera HOM05D001299 ORTHO05D013156 1.1e-07 60.8 159 30.2
Zm00001eb301210 Zea mays HOM05D001299 ORTHO05D001985 1.4e-07 60.5 202 23.8
CsaV3_5G034910 Cucumis sativus L. HOM05D001299 ORTHO05D001985 3.1e-07 59.3 198 25.8
Nitab4.5_0000414g0100 Nicotiana tabacum HOM05D001299 ORTHO05D001985 3.1e-07 59.3 198 26.3
Aqoxy2G03452 Aquilegia oxysepala HOM05D001299 ORTHO05D001985 4.0e-07 58.9 198 26.8
arahy.Tifrunner.gnm1.ann1.IMCF17 Arachis hypogaea HOM05D001299 ORTHO05D001985 4.0e-07 58.9 198 25.3
Nitab4.5_0012569g0010 Nicotiana tabacum HOM05D001299 ORTHO05D001985 5.2e-07 58.5 198 26.3
QL03p025013 Quercus lobata HOM05D001299 ORTHO05D001985 5.2e-07 58.5 202 24.8
SHI04808 Sapria himalayana HOM05D001299 ORTHO05D001985 5.2e-07 58.5 197 24.9
Actinidia05772 Actinidia chinensis HOM05D001299 ORTHO05D001985 6.8e-07 58.2 202 25.7
Nn1g02426 Nelumbo nucifera HOM05D001299 ORTHO05D001985 6.8e-07 58.2 198 25.8
PGSC0003DMG400030509 Solanum tuberosum HOM05D001299 ORTHO05D001985 6.8e-07 58.2 198 25.3
arahy.Tifrunner.gnm1.ann1.6YEN7W Arachis hypogaea HOM05D001299 ORTHO05D001985 8.9e-07 57.8 198 25.3
ClCG05G022210 Citrullus lanatus HOM05D001299 ORTHO05D001985 8.9e-07 57.8 198 25.3
SalBow8G3903 Salvia bowleyana HOM05D001299 ORTHO05D001985 8.9e-07 57.8 200 25.0
PSO832G2935 Papaver somniferum HOM05D001299 ORTHO05D001985 1.2e-06 57.4 198 25.8
VMungo0251G0682 Vigna mungo HOM05D001299 ORTHO05D001985 1.2e-06 57.4 198 25.3
ECA232G3192 Erigeron canadensis HOM05D001299 ORTHO05D001985 1.5e-06 57.0 198 24.2
Lj3P875T18 Lonicera japonica HOM05D001299 ORTHO05D001985 1.5e-06 57.0 198 24.7
Pp3c19_7350 Physcomitrium patens HOM05D001299 ORTHO05D013156 1.5e-06 57.0 192 27.1
Prupe.1G322200 Prunus persica HOM05D001299 ORTHO05D001985 1.5e-06 57.0 198 25.3
Lalb_Chr06g0165631 Lupinus albus HOM05D001299 ORTHO05D001985 2.0e-06 56.6 199 25.6
Medtr1g108440 Medicago truncatula HOM05D001299 ORTHO05D001985 2.0e-06 56.6 198 24.7
TAR362G1204 Trochodendron aralioides HOM05D001299 ORTHO05D001985 2.0e-06 56.6 198 25.8
Atru.chr11.382 Acer truncatum HOM05D001299 ORTHO05D001985 2.6e-06 56.2 198 23.7
BcaB07g30410 Brassica carinata HOM05D001299 ORTHO05D001985 2.6e-06 56.2 198 24.7
Lj5g0026699 Lotus japonicus HOM05D001299 ORTHO05D001985 2.6e-06 56.2 198 24.7
CANSAT54G2431 Cannabis sativa HOM05D001299 ORTHO05D001985 3.4e-06 55.8 198 22.7
MELO3C012301.2 Cucumis melo HOM05D001299 ORTHO05D001985 3.4e-06 55.8 198 25.3
RcHm_v2.0_Chr3g0451421 Rosa chinensis HOM05D001299 ORTHO05D001985 3.4e-06 55.8 202 23.3
Hund06960 Selenicereus undatus HOM05D001299 ORTHO05D001985 3.4e-06 55.8 199 25.6
TAR636G0103 Trochodendron aralioides HOM05D001299 ORTHO05D001985 3.4e-06 55.8 198 23.7
Lj6P749T27 Lonicera japonica HOM05D001299 ORTHO05D001985 4.4e-06 55.5 198 25.3
Lalb_Chr02g0145531 Lupinus albus HOM05D001299 ORTHO05D001985 4.4e-06 55.5 199 25.6
PSO063G5077 Papaver somniferum HOM05D001299 ORTHO05D001985 4.4e-06 55.5 198 23.2
TAR636G3567 Trochodendron aralioides HOM05D001299 ORTHO05D001985 4.4e-06 55.5 198 25.3
Peaxi162Scf00119g00159 Petunia axillaris HOM05D001299 ORTHO05D001985 5.8e-06 55.1 198 24.7
vmacro18971 Vaccinium macrocarpon HOM05D001299 ORTHO05D001985 5.8e-06 55.1 199 26.1
Glyma.10G265400 Glycine max HOM05D001299 ORTHO05D001985 7.6e-06 54.7 199 26.1
Gohir.A01G153700 Gossypium hirsutum HOM05D001299 ORTHO05D001985 7.6e-06 54.7 201 24.9
PGSC0003DMG400005961 Solanum tuberosum HOM05D001299 ORTHO05D001985 7.6e-06 54.7 198 24.7
Cre03.g187450 Chlamydomonas reinhardtii HOM05D001299 ORTHO05D001985 9.9e-06 54.3 199 24.6
Ciclev10002135m.g Citrus clementina HOM05D001299 ORTHO05D001985 9.9e-06 54.3 200 26.0
Glyma.20G125200 Glycine max HOM05D001299 ORTHO05D001985 9.9e-06 54.3 199 26.1
Phvul.007G036500 Phaseolus vulgaris HOM05D001299 ORTHO05D001985 9.9e-06 54.3 198 25.3


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