Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007785 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 1.1e-85 320.1 176 100.0
CSS0006490 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 4.2e-82 308.1 176 96.6
Dinv22954 Davidia involucrata HOM05D006478 ORTHO05D008071 7.0e-61 237.7 176 75.0
Actinidia31787 Actinidia chinensis HOM05D006478 ORTHO05D008071 1.3e-59 233.4 176 73.9
Dinv28557 Davidia involucrata HOM05D000120 ORTHO05D000068 3.6e-57 225.3 166 74.1
DCAR_018100 Daucus carota HOM05D006478 ORTHO05D008071 2.5e-50 202.6 176 64.2
DCAR_028724 Daucus carota HOM05D006478 ORTHO05D008071 1.6e-49 199.9 178 64.6
QL09p018992 Quercus lobata HOM05D006478 ORTHO05D008071 3.1e-48 195.7 175 65.1
CiPaw.04G061000 Carya illinoinensis HOM05D006478 ORTHO05D008071 6.8e-48 194.5 176 62.5
Potri.012G127100 Populus trichocarpa HOM05D006478 ORTHO05D008071 3.4e-47 192.2 176 64.2
Cc07_g16780 Coffea canephora HOM05D006478 ORTHO05D008071 7.5e-47 191.0 176 62.5
HanXRQChr13g0420601 Helianthus annuus HOM05D006478 ORTHO05D008071 9.8e-47 190.7 176 59.7
vmacro09898 Vaccinium macrocarpon HOM05D006478 ORTHO05D008071 9.8e-47 190.7 150 68.7
Atru.chr1.683 Acer truncatum HOM05D006478 ORTHO05D008071 1.3e-46 190.3 176 62.5
Sabra12G0096300 Salix brachista HOM05D006478 ORTHO05D008071 3.7e-46 188.7 176 64.2
Hma1.2p1_0146F.1_g065730 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 8.3e-46 187.6 184 60.9
CANSAT56G4273 Cannabis sativa HOM05D006478 ORTHO05D008071 2.4e-45 186.0 176 56.8
MD07G1255100 Malus domestica HOM05D006478 ORTHO05D008071 2.4e-45 186.0 176 59.7
TWI23G1172 Tripterygium wilfordii HOM05D006478 ORTHO05D008071 7.0e-45 184.5 176 61.4
Ciclev10006041m.g Citrus clementina HOM05D006478 ORTHO05D008071 1.6e-44 183.3 176 59.1
Migut.O00298 Erythranthe guttata HOM05D006478 ORTHO05D008071 2.0e-44 183.0 175 61.1
Prupe.2G278900 Prunus persica HOM05D006478 ORTHO05D008071 3.5e-44 182.2 176 58.5
FAN12G3923 Fragaria x ananassa HOM05D006478 ORTHO05D008071 6.0e-44 181.4 176 57.4
Manes.14G035000 Manihot esculenta HOM05D006478 ORTHO05D008071 7.8e-44 181.0 174 60.9
Cfa008204 Carpinus fangiana HOM05D006478 ORTHO05D008071 1.0e-43 180.6 176 59.7
GSVIVG01018613001 Vitis vinifera HOM05D006478 ORTHO05D008071 1.0e-43 180.6 176 58.5
Nn6g34073 Nelumbo nucifera HOM05D006478 ORTHO05D008071 2.3e-43 179.5 181 57.5
FAN17G1857 Fragaria x ananassa HOM05D006478 ORTHO05D008071 3.0e-43 179.1 176 56.8
Lsat_1_v5_gn_8_8920 Lactuca sativa HOM05D006478 ORTHO05D008071 5.0e-43 178.3 176 57.4
RcHm_v2.0_Chr4g0413311 Rosa chinensis HOM05D006478 ORTHO05D008071 5.0e-43 178.3 176 57.4
Eucgr.A02884 Eucalyptus grandis HOM05D006478 ORTHO05D008071 6.6e-43 177.9 176 56.8
Nitab4.5_0001383g0120 Nicotiana tabacum HOM05D006478 ORTHO05D008071 8.6e-43 177.6 168 60.7
FvH4_4g13180 Fragaria vesca HOM05D006478 ORTHO05D008071 1.1e-42 177.2 176 56.2
CAN.G645.17 Capsicum annuum HOM05D006478 ORTHO05D008071 1.9e-42 176.4 176 58.0
TAR629G1779 Trochodendron aralioides HOM05D006478 ORTHO05D008071 9.5e-42 174.1 186 56.5
Sopen11g002780 Solanum pennellii HOM05D006478 ORTHO05D008071 1.2e-41 173.7 176 58.5
ClCG02G008790 Citrullus lanatus HOM05D003975 ORTHO05D008071 1.6e-41 173.3 179 54.7
SalBow5G3546 Salvia bowleyana HOM05D006478 ORTHO05D008071 3.6e-41 172.2 176 58.0
MSTRG.8414 Avicennia marina HOM05D006478 ORTHO05D008071 6.2e-41 171.4 176 56.8
SalBow5G4313 Salvia bowleyana HOM05D006478 ORTHO05D008071 6.2e-41 171.4 176 58.0
CsaV3_3G016200 Cucumis sativus L. HOM05D006478 ORTHO05D008071 8.1e-41 171.0 179 55.3
Sed0002492 Sechium edule HOM05D006478 ORTHO05D008071 1.1e-40 170.6 176 55.7
MELO3C006818.2 Cucumis melo HOM05D006478 ORTHO05D008071 4.0e-40 168.7 179 53.6
ECA233G2919 Erigeron canadensis HOM05D006478 ORTHO05D008071 8.9e-40 167.5 176 55.7
SGA_v2.0_scaffold10G05491 Striga asiatica HOM05D006478 ORTHO05D008071 2.6e-39 166.0 176 55.7
AUR62002188 Chenopodium quinoa HOM05D006478 ORTHO05D008071 3.4e-39 165.6 178 56.7
EL10Ac3g05828 Beta vulgaris HOM05D006478 ORTHO05D008071 5.8e-39 164.9 178 55.6
AUR62015523 Chenopodium quinoa HOM05D006478 ORTHO05D008071 5.8e-39 164.9 178 55.6
PGR042G2342 Punica granatum HOM05D006478 ORTHO05D008071 4.9e-38 161.8 176 52.8
PSO170G1682 Papaver somniferum HOM05D006478 ORTHO05D008071 8.3e-38 161.0 165 52.7
THA.LOC104811518 Tarenaya hassleriana HOM05D006478 ORTHO05D008071 1.9e-37 159.8 173 56.6
Rhsim09G0192300 Rhododendron simsii HOM05D006478 ORTHO05D008071 2.4e-37 159.5 168 56.5
Sc19g0001980 Simmondsia chinensis HOM05D006478 ORTHO05D008071 3.2e-37 159.1 178 52.8
PSO782G1599 Papaver somniferum HOM05D006478 ORTHO05D008071 5.4e-37 158.3 165 52.1
Hma1.2p1_0654F.1_g196670 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 2.7e-36 156.0 181 51.4
ECA247G1821 Erigeron canadensis HOM05D006478 ORTHO05D008071 3.5e-36 155.6 176 55.1
FAN07G1397 Fragaria x ananassa HOM05D006478 ORTHO05D008071 1.9e-34 149.8 144 56.9
Carub.0008s1155 Capsella rubella HOM05D006478 ORTHO05D008071 7.3e-34 147.9 176 50.6
CARHR264290 Cardamine hirsuta HOM05D006478 ORTHO05D008071 2.1e-33 146.4 176 50.0
Thhalv10014843m.g Eutrema salsugineum HOM05D006478 ORTHO05D008071 4.7e-33 145.2 176 50.6
AT5G51510 Arabidopsis thaliana HOM05D006478 ORTHO05D008071 6.2e-33 144.8 176 50.6
Sp6g13670 Schrenkiella parvula HOM05D006478 ORTHO05D008071 6.2e-33 144.8 176 51.1
Peaxi162Scf00241g00526 Petunia axillaris HOM05D006478 ORTHO05D008071 1.4e-32 143.7 142 54.2
AL8G25810 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 1.8e-32 143.3 176 50.6
AL64U10030 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 5.2e-32 141.7 176 50.0
Atru.chr12.858 Acer truncatum HOM05D006478 ORTHO05D008071 2.0e-31 139.8 126 62.7
BcaC04g20665 Brassica carinata HOM05D006478 ORTHO05D008071 3.4e-31 139.0 176 48.9
C09p40820 Brassica napus HOM05D006478 ORTHO05D008071 3.4e-31 139.0 176 48.9
BolC9t56962H Brassica oleracea HOM05D006478 ORTHO05D008071 3.4e-31 139.0 176 48.9
Os10g0508600 Oryza sativa ssp. japonica HOM05D006478 ORTHO05D008071 5.8e-31 138.3 176 45.5
BcaB08g35507 Brassica carinata HOM05D006478 ORTHO05D008071 7.6e-31 137.9 176 47.7
Haze_13851 Corylus avellana HOM05D006478 ORTHO05D008071 9.9e-31 137.5 176 52.8
A10p09440 Brassica napus HOM05D006478 ORTHO05D008071 1.3e-30 137.1 177 48.0
BraA10t43020Z Brassica rapa HOM05D006478 ORTHO05D008071 1.3e-30 137.1 177 48.0
Aa31LG3G7930 Aethionema arabicum HOM05D006478 ORTHO05D008071 3.8e-30 135.6 204 44.6
PGSC0003DMG400023983 Solanum tuberosum HOM05D006478 ORTHO05D008071 3.8e-30 135.6 177 49.2
Lalb_Chr19g0140371 Lupinus albus HOM05D006478 ORTHO05D008071 8.4e-30 134.4 174 46.0
arahy.Tifrunner.gnm1.ann1.R2ZWGQ Arachis hypogaea HOM05D006478 ORTHO05D008071 1.4e-29 133.7 184 46.2
Zm00001eb043910 Zea mays HOM05D006478 ORTHO05D008071 3.2e-29 132.5 169 45.0
Psat2g100400 Pisum sativum HOM05D006478 ORTHO05D008071 4.1e-29 132.1 182 45.1
Duzib213G0671 Durio zibethinus HOM05D006478 ORTHO05D008071 2.1e-28 129.8 177 49.7
HPP92_021027 Vanilla planifolia HOM05D006478 ORTHO05D008071 2.7e-28 129.4 172 45.9
Psat3g066720 Pisum sativum HOM05D006478 ORTHO05D008071 2.3e-27 126.3 186 46.8
Glyma.18G235100 Glycine max HOM05D006478 ORTHO05D008071 6.6e-27 124.8 184 41.3
Gohir.A01G099000 Gossypium hirsutum HOM05D006478 ORTHO05D008071 6.6e-27 124.8 177 48.0
Gohir.D01G083500 Gossypium hirsutum HOM05D006478 ORTHO05D008071 1.1e-26 124.0 177 48.6
Gorai.002G109200 Gossypium raimondii HOM05D006478 ORTHO05D008071 1.1e-26 124.0 177 48.6
Glyma.09G257500 Glycine max HOM05D006478 ORTHO05D008071 1.5e-26 123.6 218 35.8
TPR.G3657 Trifolium pratense HOM05D006478 ORTHO05D008071 1.9e-26 123.2 180 42.8
Thecc.07G184100 Theobroma cacao HOM05D006478 ORTHO05D008071 3.3e-26 122.5 177 47.5
Lj6g0019546 Lotus japonicus HOM05D006478 ORTHO05D008071 4.3e-26 122.1 183 43.7
Medtr3g075310 Medicago truncatula HOM05D006478 ORTHO05D008071 5.6e-26 121.7 186 45.7
Phvul.011G177900 Phaseolus vulgaris HOM05D006478 ORTHO05D008071 5.6e-26 121.7 183 39.9
Ca_03612_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 3.6e-25 119.0 186 41.4
arahy.Tifrunner.gnm1.ann1.LW4644 Arachis hypogaea HOM05D006478 ORTHO05D008071 5.2e-24 115.2 143 47.6
CAN.G1338.3 Capsicum annuum HOM05D006478 ORTHO05D008071 2.6e-23 112.8 129 51.2
CDE02G0477 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 7.6e-23 111.3 125 46.4
ATR0049G082 Amborella trichopoda HOM05D006478 ORTHO05D008071 3.2e-21 105.9 103 56.3
CDE11G0941 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 7.1e-21 104.8 116 47.4
Solyc11g006880.3 Solanum lycopersicum HOM05D006478 ORTHO05D008071 9.3e-21 104.4 119 52.9
unitig_8.g3700 Utricularia gibba HOM05D006478 ORTHO05D008071 2.1e-20 103.2 146 41.8
TAR125G0001 Trochodendron aralioides HOM05D006478 ORTHO05D008071 6.0e-20 101.7 166 42.2
Aqoxy3G03162 Aquilegia oxysepala HOM05D006478 ORTHO05D008071 9.6e-18 94.4 181 35.9
RcHm_v2.0_Chr4g0409771 Rosa chinensis HOM05D006478 ORTHO05D008071 2.1e-17 93.2 110 48.2
Hund04605 Selenicereus undatus HOM05D006478 ORTHO05D008071 6.2e-17 91.7 141 43.3
Mapoly0022s0103 Marchantia polymorpha HOM05D006478 ORTHO05D008071 1.5e-15 87.0 170 32.4
Sed0011118 Sechium edule HOM05D006478 ORTHO05D008071 6.4e-14 81.6 176 35.8
Manes.03G110816 Manihot esculenta HOM05D006478 ORTHO05D008071 3.2e-13 79.3 46 84.8
Oeu014948.1 Olea europaea HOM05D006478 ORTHO05D008071 5.4e-13 78.6 85 50.6
VMungo1127G0460 Vigna mungo HOM05D006478 ORTHO05D008071 7.1e-13 78.2 132 34.1
Lj1g0017005 Lotus japonicus HOM05D006478 ORTHO05D008071 9.3e-13 77.8 144 39.6
Prupe.2G279400 Prunus persica HOM05D006478 ORTHO05D008071 9.3e-13 77.8 95 45.3
Actinidia03077 Actinidia chinensis HOM05D006478 ORTHO05D008071 4.6e-12 75.5 176 36.9
Nitab4.5_0001780g0030 Nicotiana tabacum HOM05D006478 ORTHO05D008071 8.7e-11 71.2 69 55.1
Pp3c3_28350 Physcomitrium patens HOM05D006478 ORTHO05D008071 2.5e-10 69.7 170 28.2
CiPaw.05G217800 Carya illinoinensis HOM05D006478 ORTHO05D008071 1.3e-09 67.4 74 51.4
HPP92_020994 Vanilla planifolia HOM05D006478 ORTHO05D008071 1.6e-09 67.0 126 36.5
Ca_10075_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 2.8e-09 66.2 73 54.8
Aqoxy3G03161 Aquilegia oxysepala HOM05D006478 ORTHO05D008071 9.9e-07 57.8 155 29.0


User provided reference genes

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