Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007771 Camellia sinensis var. sinensis HOM05D006230 ORTHO05D007598 2.9e-82 308.5 158 100.0
Dinv27088 Davidia involucrata HOM05D006230 ORTHO05D007598 2.6e-62 242.3 158 82.9
Hma1.2p1_0112F.1_g054490 Hydrangea macrophylla HOM05D006230 ORTHO05D007598 1.4e-55 219.9 153 75.8
Atru.chr4.1981 Acer truncatum HOM05D006230 ORTHO05D007598 1.6e-51 206.5 149 71.1
Actinidia35808 Actinidia chinensis HOM05D006230 ORTHO05D007598 1.6e-51 206.5 158 71.5
Actinidia20827 Actinidia chinensis HOM05D006230 ORTHO05D007598 2.2e-50 202.6 158 71.5
Cfa014753 Carpinus fangiana HOM05D006230 ORTHO05D007598 2.2e-50 202.6 153 73.9
Lsat_1_v5_gn_2_39681 Lactuca sativa HOM05D006230 ORTHO05D007598 1.5e-49 199.9 158 69.6
Haze_11428 Corylus avellana HOM05D006230 ORTHO05D007598 2.5e-49 199.1 153 72.5
Oeu023312.1 Olea europaea HOM05D006230 ORTHO05D007598 4.2e-49 198.4 130 78.5
PGR004G2031 Punica granatum HOM05D006230 ORTHO05D007598 7.2e-49 197.6 151 70.2
TAR636G3560 Trochodendron aralioides HOM05D006230 ORTHO05D007598 7.2e-49 197.6 157 66.2
AUR62015538 Chenopodium quinoa HOM05D006230 ORTHO05D007598 9.4e-49 197.2 151 68.2
EL10Ac3g04971 Beta vulgaris HOM05D006230 ORTHO05D007598 1.2e-48 196.8 157 66.9
vmacro08530 Vaccinium macrocarpon HOM05D006230 ORTHO05D007598 1.6e-48 196.4 158 69.0
Nitab4.5_0001425g0090 Nicotiana tabacum HOM05D006230 ORTHO05D007598 2.7e-48 195.7 160 68.1
Sed0003219 Sechium edule HOM05D006230 ORTHO05D007598 4.7e-48 194.9 131 79.4
Ciclev10006136m.g Citrus clementina HOM05D006230 ORTHO05D007598 1.0e-47 193.7 155 69.7
Potri.010G068500 Populus trichocarpa HOM05D006230 ORTHO05D007598 1.4e-47 193.4 148 72.3
Sabra10G0038500 Salix brachista HOM05D006230 ORTHO05D007598 1.4e-47 193.4 155 69.0
Nitab4.5_0006936g0040 Nicotiana tabacum HOM05D006230 ORTHO05D007598 1.8e-47 193.0 159 68.6
Sc13g0005900 Simmondsia chinensis HOM05D006230 ORTHO05D007598 2.3e-47 192.6 151 68.9
Sopen09g033320 Solanum pennellii HOM05D006230 ORTHO05D007598 2.3e-47 192.6 158 68.4
TWI73G0434 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 2.3e-47 192.6 137 73.0
Solyc09g090410.3 Solanum lycopersicum HOM05D006230 ORTHO05D007598 3.0e-47 192.2 158 67.7
PGSC0003DMG400017161 Solanum tuberosum HOM05D006230 ORTHO05D007598 3.0e-47 192.2 158 67.1
Thecc.04G260000 Theobroma cacao HOM05D006230 ORTHO05D007598 3.0e-47 192.2 124 79.8
Duzib212G0996 Durio zibethinus HOM05D006230 ORTHO05D007598 4.0e-47 191.8 127 78.0
Eucgr.H02995 Eucalyptus grandis HOM05D006230 ORTHO05D007598 4.0e-47 191.8 152 67.8
CAN.G220.45 Capsicum annuum HOM05D006230 ORTHO05D007598 5.2e-47 191.4 126 80.2
CANSAT78G0232 Cannabis sativa HOM05D006230 ORTHO05D007598 8.8e-47 190.7 154 68.8
CiPaw.02G108600 Carya illinoinensis HOM05D006230 ORTHO05D007598 1.2e-46 190.3 162 67.3
COL.COLO4_15930 Corchorus olitorius HOM05D006230 ORTHO05D007598 1.2e-46 190.3 145 71.0
Gohir.A02G041200 Gossypium hirsutum HOM05D006230 ORTHO05D007598 1.2e-46 190.3 128 78.9
CANSAT78G0887 Cannabis sativa HOM05D006230 ORTHO05D007598 1.5e-46 189.9 129 76.7
QL06p019992 Quercus lobata HOM05D006230 ORTHO05D007598 3.4e-46 188.7 151 68.9
Cc03_g05900 Coffea canephora HOM05D006230 ORTHO05D007598 4.4e-46 188.3 159 65.4
Duzib151G0304 Durio zibethinus HOM05D006230 ORTHO05D007598 4.4e-46 188.3 127 77.2
Gorai.005G052000 Gossypium raimondii HOM05D006230 ORTHO05D007598 7.5e-46 187.6 128 78.1
AT2G33450 Arabidopsis thaliana HOM05D006230 ORTHO05D007598 1.3e-45 186.8 135 71.1
Gohir.D02G047000 Gossypium hirsutum HOM05D006230 ORTHO05D007598 1.3e-45 186.8 128 76.6
ClCG05G004160 Citrullus lanatus HOM05D006230 ORTHO05D007598 2.2e-45 186.0 131 77.1
HanXRQChr14g0434851 Helianthus annuus HOM05D006230 ORTHO05D007598 2.2e-45 186.0 129 76.7
AL4G29120 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 2.8e-45 185.7 135 70.4
Peaxi162Scf00602g00421 Petunia axillaris HOM05D006230 ORTHO05D007598 3.7e-45 185.3 158 67.1
Carub.0004s1508 Capsella rubella HOM05D006230 ORTHO05D007598 4.8e-45 184.9 135 70.4
GSVIVG01027870001 Vitis vinifera HOM05D006230 ORTHO05D007598 4.8e-45 184.9 117 82.1
Aqoxy2G03714 Aquilegia oxysepala HOM05D006230 ORTHO05D007598 6.3e-45 184.5 157 68.2
TWI53G0221 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 6.3e-45 184.5 119 76.5
RcHm_v2.0_Chr4g0394691 Rosa chinensis HOM05D006230 ORTHO05D007598 8.3e-45 184.1 139 70.5
FAN12G2171 Fragaria x ananassa HOM05D006230 ORTHO05D007598 1.1e-44 183.7 139 69.1
CARHR127460 Cardamine hirsuta HOM05D006230 ORTHO05D007598 1.4e-44 183.3 135 70.4
FvH4_4g04200 Fragaria vesca HOM05D006230 ORTHO05D007598 1.4e-44 183.3 139 68.3
Migut.G00496 Erythranthe guttata HOM05D006230 ORTHO05D007598 1.8e-44 183.0 140 70.0
Sed0015876 Sechium edule HOM05D006230 ORTHO05D007598 2.4e-44 182.6 131 74.8
FAN17G1889 Fragaria x ananassa HOM05D006230 ORTHO05D007598 3.1e-44 182.2 139 68.3
Potri.008G169800 Populus trichocarpa HOM05D006230 ORTHO05D007598 3.1e-44 182.2 117 79.5
MELO3C006400.2 Cucumis melo HOM05D006230 ORTHO05D007598 4.1e-44 181.8 131 74.0
CsaV3_3G011880 Cucumis sativus L. HOM05D006230 ORTHO05D007598 5.4e-44 181.4 132 74.2
Prupe.1G045100 Prunus persica HOM05D006230 ORTHO05D007598 5.4e-44 181.4 152 63.8
Cpa.g.sc44.25 Carica papaya HOM05D006230 ORTHO05D007598 9.1e-44 180.6 150 66.0
Sp1g03290 Schrenkiella parvula HOM05D006230 ORTHO05D007598 1.2e-43 180.3 133 69.2
Oeu059405.1 Olea europaea HOM05D006230 ORTHO05D007598 1.6e-43 179.9 166 59.6
Sp4g15790 Schrenkiella parvula HOM05D006230 ORTHO05D007598 1.6e-43 179.9 136 69.9
THA.LOC104801077 Tarenaya hassleriana HOM05D006230 ORTHO05D007598 2.0e-43 179.5 117 79.5
Aa31LG5G3840 Aethionema arabicum HOM05D006230 ORTHO05D007598 2.7e-43 179.1 139 66.9
PSO063G4949 Papaver somniferum HOM05D006230 ORTHO05D007598 3.5e-43 178.7 155 65.8
MD16G1223800 Malus domestica HOM05D006230 ORTHO05D007598 5.9e-43 177.9 152 63.8
Manes.15G043800 Manihot esculenta HOM05D006230 ORTHO05D007598 7.7e-43 177.6 162 63.6
Carub.0001s0365 Capsella rubella HOM05D006230 ORTHO05D007598 1.0e-42 177.2 117 76.1
Gorai.011G177300 Gossypium raimondii HOM05D006230 ORTHO05D007598 1.0e-42 177.2 116 81.9
Lalb_Chr03g0037521 Lupinus albus HOM05D006230 ORTHO05D007598 1.0e-42 177.2 151 64.9
PSO017G6779 Papaver somniferum HOM05D006230 ORTHO05D007598 1.3e-42 176.8 151 65.6
Lalb_Chr01g0020881 Lupinus albus HOM05D006230 ORTHO05D007598 1.7e-42 176.4 126 72.2
Gohir.D10G157800 Gossypium hirsutum HOM05D006230 ORTHO05D007598 2.9e-42 175.6 116 81.0
Gohir.A10G109400 Gossypium hirsutum HOM05D006230 ORTHO05D007598 5.0e-42 174.9 116 80.2
DCAR_002306 Daucus carota HOM05D006230 ORTHO05D007598 6.5e-42 174.5 151 64.2
Thhalv10017390m.g Eutrema salsugineum HOM05D006230 ORTHO05D007598 8.5e-42 174.1 119 77.3
Phvul.007G278700 Phaseolus vulgaris HOM05D006230 ORTHO05D007598 1.1e-41 173.7 132 73.5
Ca_05177_v3 Cicer arietinum L. HOM05D006230 ORTHO05D007598 1.5e-41 173.3 149 65.8
ATR0736G074 Amborella trichopoda HOM05D006230 ORTHO05D007598 1.9e-41 172.9 155 62.6
AL1G14110 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 1.9e-41 172.9 117 76.1
BraA04t18078Z Brassica rapa HOM05D006230 ORTHO05D007598 1.9e-41 172.9 137 68.6
BolC4t27775H Brassica oleracea HOM05D006230 ORTHO05D007598 2.5e-41 172.6 137 67.9
Glyma.10G002600 Glycine max HOM05D006230 ORTHO05D007598 2.5e-41 172.6 116 75.9
Hund11917 Selenicereus undatus HOM05D006230 ORTHO05D007598 2.5e-41 172.6 151 62.9
ECA234G3973 Erigeron canadensis HOM05D006230 ORTHO05D007598 5.5e-41 171.4 159 62.9
BcaB02g10562 Brassica carinata HOM05D006230 ORTHO05D007598 1.6e-40 169.9 137 69.3
C04p62980 Brassica napus HOM05D006230 ORTHO05D007598 2.1e-40 169.5 137 67.2
A04p25750 Brassica napus HOM05D006230 ORTHO05D007598 3.6e-40 168.7 138 68.1
BcaB06g28689 Brassica carinata HOM05D006230 ORTHO05D007598 6.1e-40 167.9 119 74.8
BcaC02g11431 Brassica carinata HOM05D006230 ORTHO05D007598 6.1e-40 167.9 137 68.6
C04p15650 Brassica napus HOM05D006230 ORTHO05D007598 6.1e-40 167.9 137 68.6
Medtr1g041320 Medicago truncatula HOM05D006230 ORTHO05D007598 1.4e-39 166.8 117 76.9
unitig_32.g10851 Utricularia gibba HOM05D006230 ORTHO05D007598 1.8e-39 166.4 125 71.2
SGA_v2.0_scaffold67G22731 Striga asiatica HOM05D006230 ORTHO05D007598 6.8e-39 164.5 129 67.4
Psat6g103800 Pisum sativum HOM05D006230 ORTHO05D007598 1.2e-38 163.7 118 72.0
MD13G1218400 Malus domestica HOM05D006230 ORTHO05D007598 1.5e-38 163.3 111 75.7
SalBow3G4585 Salvia bowleyana HOM05D006230 ORTHO05D007598 2.6e-38 162.5 140 62.9
Lj6g0026311 Lotus japonicus HOM05D006230 ORTHO05D007598 3.4e-38 162.2 119 72.3
BcaC02g07821 Brassica carinata HOM05D006230 ORTHO05D007598 5.7e-38 161.4 141 63.1
CDE05G0971 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 5.7e-38 161.4 116 71.6
RcHm_v2.0_Chr4g0394651 Rosa chinensis HOM05D006230 ORTHO05D007598 9.8e-38 160.6 151 57.0
CDE11G0022 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 1.7e-37 159.8 151 60.3
BolC4t23134H Brassica oleracea HOM05D006230 ORTHO05D007598 2.8e-37 159.1 138 66.7
Os05g0101400 Oryza sativa ssp. japonica HOM05D006230 ORTHO05D007598 4.9e-37 158.3 124 66.9
TPR.G32792 Trifolium pratense HOM05D006230 ORTHO05D007598 6.3e-37 157.9 117 72.6
Zm00001eb222850 Zea mays HOM05D006230 ORTHO05D007598 6.3e-37 157.9 125 68.8
HPP92_012809 Vanilla planifolia HOM05D006230 ORTHO05D007598 3.5e-35 152.1 128 66.4
arahy.Tifrunner.gnm1.ann1.ADZ0J4 Arachis hypogaea HOM05D006230 ORTHO05D007598 3.8e-34 148.7 78 93.6
Zm00001eb047510 Zea mays HOM05D006230 ORTHO05D007598 8.6e-34 147.5 117 67.5
Thecc.10G124200 Theobroma cacao HOM05D006230 ORTHO05D007598 5.6e-33 144.8 78 89.7
SEGI_13554 Sequoiadendron giganteum HOM05D006230 ORTHO05D007598 2.0e-30 136.3 128 60.9
Rhsim04G0174900 Rhododendron simsii HOM05D006230 ORTHO05D007598 4.4e-30 135.2 158 55.7
Prupe.8G083300 Prunus persica HOM05D006230 ORTHO05D007598 2.2e-29 132.9 82 79.3
Ah.04g155450 Amaranthus hybridus HOM05D000071 ORTHO05D007598 3.7e-29 132.1 120 61.7
MD00G1118000 Malus domestica HOM05D006230 ORTHO05D007598 6.4e-29 131.3 75 80.0
AagrBONN_evm.TU.Sc2ySwM_228.3795 Anthoceros agrestis HOM05D006230 ORTHO05D007598 8.6e-26 120.9 107 57.0
Duzib052G0467 Durio zibethinus HOM05D006230 ORTHO05D007598 1.5e-25 120.2 117 58.1
Pp3c6_1140 Physcomitrium patens HOM05D006230 ORTHO05D007598 8.0e-24 114.4 130 51.5
Pp3c5_28500 Physcomitrium patens HOM05D006230 ORTHO05D007598 1.2e-22 110.5 75 72.0
Mapoly0087s0077 Marchantia polymorpha HOM05D006230 ORTHO05D007598 1.5e-22 110.2 114 52.6
SMO131G0001 Selaginella moellendorffii HOM05D006230 ORTHO05D007598 4.9e-21 105.1 75 65.3
CBR_g23072 Chara braunii HOM05D006230 ORTHO05D007598 3.5e-19 99.0 78 62.8
Cre06.g265800 Chlamydomonas reinhardtii HOM05D006230 ORTHO05D007598 6.2e-16 88.2 77 55.8
MCO07G061 Micromonas commoda HOM05D006230 ORTHO05D007598 5.2e-15 85.1 125 42.4
Nn3g19733 Nelumbo nucifera HOM05D006230 ORTHO05D007598 1.2e-08 63.9 36 88.9
VMungo0684G0001 Vigna mungo HOM05D006230 ORTHO05D007598 2.3e-07 59.7 65 47.7


User provided reference genes

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