Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007739 Camellia sinensis var. sinensis HOM05D000364 ORTHO05D000235 7.0e-79 297.4 166 100.0
CSS0047723 Camellia sinensis var. sinensis HOM05D000364 ORTHO05D000235 7.0e-79 297.4 166 100.0
vmacro01994 Vaccinium macrocarpon HOM05D000364 ORTHO05D000235 3.1e-42 175.6 165 63.0
Actinidia34397 Actinidia chinensis HOM05D000364 ORTHO05D000235 7.1e-39 164.5 167 59.3
Actinidia00404 Actinidia chinensis HOM05D000364 ORTHO05D000235 4.6e-38 161.8 167 58.7
Actinidia17488 Actinidia chinensis HOM05D000364 ORTHO05D000235 1.1e-31 140.6 167 52.1
Hma1.2p1_1023F.1_g249040 Hydrangea macrophylla HOM05D000364 ORTHO05D000235 9.3e-31 137.5 168 50.0
Hma1.2p1_2341F.1_g320310 Hydrangea macrophylla HOM05D000364 ORTHO05D000235 1.3e-29 133.7 169 49.7
Haze_10196 Corylus avellana HOM05D000364 ORTHO05D000235 8.7e-29 131.0 175 53.7
Rhsim11G0156900 Rhododendron simsii HOM05D000364 ORTHO05D000235 8.7e-29 131.0 172 50.6
Sopen01g049720 Solanum pennellii HOM05D000364 ORTHO05D000235 4.8e-27 125.2 163 49.1
Prupe.8G136800 Prunus persica HOM05D000364 ORTHO05D000235 6.2e-27 124.8 171 50.3
Rhsim11G0158500 Rhododendron simsii HOM05D000364 ORTHO05D000235 6.2e-27 124.8 173 49.1
Lj9C325G1 Lonicera japonica HOM05D000364 ORTHO05D000235 8.2e-27 124.4 171 49.1
Nitab4.5_0001480g0160 Nicotiana tabacum HOM05D000364 ORTHO05D000235 1.4e-26 123.6 163 45.4
PGSC0003DMG401025764 Solanum tuberosum HOM05D000364 ORTHO05D000235 1.4e-26 123.6 166 48.8
Medtr1g107185 Medicago truncatula HOM05D000364 ORTHO05D000235 4.0e-26 122.1 169 47.3
Solyc01g107490.2 Solanum lycopersicum HOM05D000364 ORTHO05D000235 6.9e-26 121.3 163 48.5
GSVIVG01037903001 Vitis vinifera HOM05D000364 ORTHO05D000235 9.0e-26 120.9 117 65.0
Nitab4.5_0004326g0010 Nicotiana tabacum HOM05D000364 ORTHO05D000235 5.8e-25 118.2 161 47.2
Peaxi162Scf00016g02432 Petunia axillaris HOM05D000364 ORTHO05D000235 7.6e-25 117.9 171 47.4
SalBow3G3583 Salvia bowleyana HOM05D000364 ORTHO05D000235 1.3e-24 117.1 159 49.7
TAR628G1537 Trochodendron aralioides HOM05D000364 ORTHO05D000235 3.8e-24 115.5 175 50.3
CiPaw.06G168800 Carya illinoinensis HOM05D000364 ORTHO05D000235 8.4e-24 114.4 154 49.4
MD05G1091400 Malus domestica HOM05D000364 ORTHO05D000235 1.9e-23 113.2 175 48.6
CAN.G606.14 Capsicum annuum HOM05D000364 ORTHO05D000235 1.2e-22 110.5 160 46.2
Ca_11063_v3 Cicer arietinum L. HOM05D000364 ORTHO05D000235 1.2e-22 110.5 165 51.5
Glyma.20G130200 Glycine max HOM05D000364 ORTHO05D000235 1.6e-22 110.2 167 44.3
Oeu044273.1 Olea europaea HOM05D000364 ORTHO05D000235 1.0e-21 107.5 137 48.2
Atru.chr5.2473 Acer truncatum HOM05D000364 ORTHO05D000235 8.7e-21 104.4 194 41.8
Nn5g30437 Nelumbo nucifera HOM05D000364 ORTHO05D000235 1.5e-20 103.6 176 44.9
Ciclev10028922m.g Citrus clementina HOM05D000364 ORTHO05D000235 1.9e-20 103.2 173 53.2
MD10G1098900 Malus domestica HOM05D000364 ORTHO05D000235 1.9e-20 103.2 167 43.7
Thecc.02G110200 Theobroma cacao HOM05D000364 ORTHO05D000235 3.3e-20 102.4 160 47.5
TAR625G0218 Trochodendron aralioides HOM05D000364 ORTHO05D000235 4.3e-20 102.1 161 47.8
Duzib248G0059 Durio zibethinus HOM05D000364 ORTHO05D000235 5.7e-20 101.7 161 46.6
MSTRG.5335 Avicennia marina HOM05D000364 ORTHO05D000235 7.4e-20 101.3 162 43.8
Hma1.2p1_1518F.1_g288440 Hydrangea macrophylla HOM05D000364 ORTHO05D000235 1.6e-19 100.1 176 44.9
Potri.001G299300 Populus trichocarpa HOM05D000364 ORTHO05D000235 3.7e-19 99.0 162 41.4
Potri.009G094300 Populus trichocarpa HOM05D000364 ORTHO05D000235 3.7e-19 99.0 159 42.8
Oeu037258.2 Olea europaea HOM05D000364 ORTHO05D000235 8.2e-19 97.8 119 49.6
COL.COLO4_32577 Corchorus olitorius HOM05D000364 ORTHO05D000235 1.8e-18 96.7 187 40.1
VMungo0720G1543 Vigna mungo HOM05D000364 ORTHO05D000235 1.8e-18 96.7 162 42.0
Cc02_g19350 Coffea canephora HOM05D000364 ORTHO05D000235 2.4e-18 96.3 137 45.3
Cpa.g.sc106.107 Carica papaya HOM05D000364 ORTHO05D000235 4.1e-18 95.5 165 50.9
TWI31G1013 Tripterygium wilfordii HOM05D000364 ORTHO05D000235 4.1e-18 95.5 180 46.7
Phvul.007G041200 Phaseolus vulgaris HOM05D000364 ORTHO05D000235 6.9e-18 94.7 173 41.6
Sabra16G0187900 Salix brachista HOM05D000364 ORTHO05D000235 3.4e-17 92.4 162 40.7
Dinv15772 Davidia involucrata HOM05D000364 ORTHO05D000235 1.3e-16 90.5 70 64.3
TPR.G19067 Trifolium pratense HOM05D000364 ORTHO05D000235 2.2e-16 89.7 164 42.7
Cfa004600 Carpinus fangiana HOM05D000364 ORTHO05D000235 2.9e-16 89.4 123 53.7
Gohir.A13G044200 Gossypium hirsutum HOM05D000364 ORTHO05D000235 3.8e-16 89.0 152 38.2
Manes.10G076000 Manihot esculenta HOM05D000364 ORTHO05D000235 3.8e-16 89.0 186 44.6
QL11p033020 Quercus lobata HOM05D000364 ORTHO05D000235 6.5e-16 88.2 188 38.8
Glyma.10G261100 Glycine max HOM05D000364 ORTHO05D000235 2.5e-15 86.3 170 40.0
Lj5g0011967 Lotus japonicus HOM05D000364 ORTHO05D000235 1.2e-14 84.0 177 37.3
Gohir.D13G043300 Gossypium hirsutum HOM05D000364 ORTHO05D000235 2.1e-14 83.2 132 37.9
SGA_v2.0_scaffold13G06617 Striga asiatica HOM05D000364 ORTHO05D000235 2.1e-14 83.2 141 36.9
FAN24G0351 Fragaria x ananassa HOM05D000364 ORTHO05D000235 4.6e-14 82.0 188 40.4
Gorai.013G048000 Gossypium raimondii HOM05D000364 ORTHO05D000235 4.6e-14 82.0 132 37.9
Sed0026711 Sechium edule HOM05D000364 ORTHO05D000235 1.8e-13 80.1 157 38.9
ECA236G2209 Erigeron canadensis HOM05D000364 ORTHO05D000235 2.3e-13 79.7 166 36.1
FAN27G0718 Fragaria x ananassa HOM05D000364 ORTHO05D000235 3.0e-13 79.3 187 42.2
FvH4_2g04900 Fragaria vesca HOM05D000364 ORTHO05D000235 3.9e-13 79.0 188 42.0
FAN20G2525 Fragaria x ananassa HOM05D000364 ORTHO05D000235 3.9e-13 79.0 188 42.0
Lalb_Chr02g0145241 Lupinus albus HOM05D000364 ORTHO05D000235 5.1e-13 78.6 187 36.9
CANSAT25G1218 Cannabis sativa HOM05D000364 ORTHO05D000235 1.1e-12 77.4 174 46.0
CANSAT25G3174 Cannabis sativa HOM05D000364 ORTHO05D000235 1.1e-12 77.4 174 46.0
Lsat_1_v5_gn_7_85821 Lactuca sativa HOM05D000364 ORTHO05D000235 2.0e-12 76.6 183 43.7
Migut.O00602 Erythranthe guttata HOM05D000364 ORTHO05D000235 3.3e-12 75.9 118 42.4
AUR62039063 Chenopodium quinoa HOM05D000364 ORTHO05D000235 5.7e-12 75.1 161 37.9
FAN15G1292 Fragaria x ananassa HOM05D000364 ORTHO05D000235 7.4e-12 74.7 189 40.7
Migut.N01157 Erythranthe guttata HOM05D000364 ORTHO05D000235 1.7e-11 73.6 118 42.4
Lalb_Chr06g0165411 Lupinus albus HOM05D000364 ORTHO05D000235 3.7e-11 72.4 168 39.3
arahy.Tifrunner.gnm1.ann1.5S0LFQ Arachis hypogaea HOM05D000364 ORTHO05D000235 8.2e-11 71.2 181 39.8
Sabra09G0072600 Salix brachista HOM05D000364 ORTHO05D000235 1.1e-10 70.9 191 33.0
PGR042G2510 Punica granatum HOM05D000364 ORTHO05D000235 1.4e-10 70.5 167 35.9
MELO3C018496.2 Cucumis melo HOM05D000364 ORTHO05D000235 2.4e-10 69.7 128 45.3
AUR62010325 Chenopodium quinoa HOM05D000364 ORTHO05D000235 4.1e-10 68.9 161 36.6
RcHm_v2.0_Chr6g0254731 Rosa chinensis HOM05D000364 ORTHO05D000235 4.1e-10 68.9 175 42.3
MBI16_g17768_MAGBIO Magnolia biondii HOM05D000364 ORTHO05D000235 5.3e-10 68.6 167 37.1
CsaV3_7G008090 Cucumis sativus L. HOM05D000364 ORTHO05D000235 2.0e-09 66.6 126 45.2
Sc08g0001350 Simmondsia chinensis HOM05D000364 ORTHO05D000235 3.4e-09 65.9 167 37.7
BcaB06g26009 Brassica carinata HOM05D000364 ORTHO05D000235 1.3e-08 63.9 175 34.9
DCAR_029089 Daucus carota HOM05D000364 ORTHO05D000235 8.5e-08 61.2 170 29.4
PSO675G4463 Papaver somniferum HOM05D000364 ORTHO05D000235 1.1e-07 60.8 186 34.9
BolC5t33280H Brassica oleracea HOM05D000364 ORTHO05D000235 1.4e-07 60.5 139 35.3
Thhalv10021324m.g Eutrema salsugineum HOM05D000364 ORTHO05D000235 1.4e-07 60.5 174 34.5
BcaC05g28471 Brassica carinata HOM05D000364 ORTHO05D000235 3.2e-07 59.3 188 31.9
A05p30120 Brassica napus HOM05D000364 ORTHO05D000235 9.4e-07 57.8 175 32.6
BraA05t21852Z Brassica rapa HOM05D000364 ORTHO05D000235 9.4e-07 57.8 175 32.6
ClCG02G006520 Citrullus lanatus HOM05D000364 ORTHO05D000235 9.4e-07 57.8 117 40.2
C05p45550 Brassica napus HOM05D000364 ORTHO05D000235 1.2e-06 57.4 188 31.4
Psat6g217320 Pisum sativum HOM05D000364 ORTHO05D000235 1.2e-06 57.4 50 64.0
MSTRG.27747 Avicennia marina HOM05D000364 ORTHO05D000235 2.7e-06 56.2 144 34.0
arahy.Tifrunner.gnm1.ann1.E736SD Arachis hypogaea HOM05D000364 ORTHO05D000235 4.7e-06 55.5 147 36.1
CARHR094920 Cardamine hirsuta HOM05D000364 ORTHO05D000235 4.7e-06 55.5 166 29.5
THA.LOC104825377 Tarenaya hassleriana HOM05D000364 ORTHO05D000235 7.9e-06 54.7 174 28.2


User provided reference genes

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