Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007738 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 2.9e-64 248.4 127 100.0
CSS0046591 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 1.3e-37 159.8 96 91.7
CSS0001709 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 2.6e-33 145.6 89 91.0
CSS0006685 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 4.5e-33 144.8 86 93.0
CSS0002085 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 1.3e-32 143.3 89 88.8
CSS0028889 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 1.4e-31 139.8 89 87.6
CSS0015899 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 1.9e-31 139.4 89 87.6
GSVIVG01012151001 Vitis vinifera HOM05D003515 ORTHO05D004347 1.9e-31 139.4 87 86.2
CSS0015745 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 2.4e-31 139.0 89 85.4
Rhsim13G0134000 Rhododendron simsii HOM05D003515 ORTHO05D004347 2.7e-30 135.6 89 83.1
RhsimUnG0176900 Rhododendron simsii HOM05D003515 ORTHO05D004347 2.7e-30 135.6 89 83.1
Hma1.2p1_0088F.1_g045243 Hydrangea macrophylla HOM05D003515 ORTHO05D004347 6.0e-30 134.4 88 85.2
vmacro03558 Vaccinium macrocarpon HOM05D003515 ORTHO05D004347 1.0e-29 133.7 89 80.9
Dinv07004 Davidia involucrata HOM05D003515 ORTHO05D004347 2.3e-29 132.5 86 84.9
HanXRQChr14g0439691 Helianthus annuus HOM05D003515 ORTHO05D004347 3.0e-29 132.1 94 77.7
CSS0031993 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 3.9e-29 131.7 82 89.0
Ciclev10014398m.g Citrus clementina HOM05D003515 ORTHO05D004347 3.9e-29 131.7 95 76.8
COL.COLO4_16231 Corchorus olitorius HOM05D003515 ORTHO05D004347 3.9e-29 131.7 96 75.0
Haze_05267 Corylus avellana HOM05D003515 ORTHO05D004347 3.9e-29 131.7 96 74.0
HanXRQChr14g0439721 Helianthus annuus HOM05D003515 ORTHO05D004347 3.9e-29 131.7 94 77.7
MD10G1227200 Malus domestica HOM05D003515 ORTHO05D004347 3.9e-29 131.7 96 75.0
Prupe.4G118000 Prunus persica HOM05D003515 ORTHO05D004347 8.7e-29 130.6 94 75.5
Cfa001125 Carpinus fangiana HOM05D003515 ORTHO05D004347 1.5e-28 129.8 96 72.9
Duzib132G1190 Durio zibethinus HOM05D003515 ORTHO05D004347 1.5e-28 129.8 105 67.6
Sabra03G0110800 Salix brachista HOM05D003515 ORTHO05D004347 1.5e-28 129.8 94 75.5
TWI63G0015 Tripterygium wilfordii HOM05D003515 ORTHO05D004347 1.5e-28 129.8 96 76.0
QL11p012061 Quercus lobata HOM05D003515 ORTHO05D004347 1.9e-28 129.4 96 72.9
PSO541G6439 Papaver somniferum HOM05D003515 ORTHO05D004347 2.5e-28 129.0 94 72.3
Atru.chr10.315 Acer truncatum HOM05D003515 ORTHO05D004347 3.3e-28 128.6 93 74.2
ECA238G0584 Erigeron canadensis HOM05D003515 ORTHO05D004347 3.3e-28 128.6 108 68.5
Lj1C1149T14 Lonicera japonica HOM05D003515 ORTHO05D004347 4.3e-28 128.3 85 81.2
RcHm_v2.0_Chr5g0021171 Rosa chinensis HOM05D003515 ORTHO05D004347 4.3e-28 128.3 96 71.9
CiPaw.10G105500 Carya illinoinensis HOM05D003515 ORTHO05D004347 7.4e-28 127.5 94 73.4
FAN11G3814 Fragaria x ananassa HOM05D003515 ORTHO05D004347 7.4e-28 127.5 96 70.8
FAN16G1075 Fragaria x ananassa HOM05D003515 ORTHO05D004347 7.4e-28 127.5 96 70.8
FAN21G1878 Fragaria x ananassa HOM05D003515 ORTHO05D004347 7.4e-28 127.5 96 70.8
Gohir.A05G245600 Gossypium hirsutum HOM05D003515 ORTHO05D004347 9.6e-28 127.1 96 69.8
Gohir.D05G247100 Gossypium hirsutum HOM05D003515 ORTHO05D004347 9.6e-28 127.1 96 69.8
Manes.03G074900 Manihot esculenta HOM05D003515 ORTHO05D004347 9.6e-28 127.1 96 71.9
Gorai.009G257800 Gossypium raimondii HOM05D003515 ORTHO05D004347 1.3e-27 126.7 96 69.8
Thecc.02G003700 Theobroma cacao HOM05D003515 ORTHO05D004347 1.6e-27 126.3 96 70.8
EL10Ac7g17242 Beta vulgaris HOM05D003515 ORTHO05D004347 2.1e-27 125.9 85 81.2
AUR62037879 Chenopodium quinoa HOM05D003515 ORTHO05D004347 2.1e-27 125.9 95 70.5
Hma1.2p1_0088F.1_g045246 Hydrangea macrophylla HOM05D003515 ORTHO05D004347 2.8e-27 125.6 79 88.6
RcHm_v2.0_Chr5g0021201 Rosa chinensis HOM05D003515 ORTHO05D004347 2.8e-27 125.6 96 70.8
TAR624G0550 Trochodendron aralioides HOM05D003515 ORTHO05D004347 2.8e-27 125.6 89 78.7
Nn7g38343 Nelumbo nucifera HOM05D003515 ORTHO05D004347 4.8e-27 124.8 89 74.2
MELO3C007012.2 Cucumis melo HOM05D003515 ORTHO05D004347 8.2e-27 124.0 94 68.1
DCAR_007777 Daucus carota HOM05D003515 ORTHO05D004347 8.2e-27 124.0 84 77.4
Eucgr.D00012 Eucalyptus grandis HOM05D003515 ORTHO05D004347 8.2e-27 124.0 95 71.6
AL8G14790 Arabidopsis lyrata HOM05D003515 ORTHO05D004347 1.4e-26 123.2 113 61.1
CsaV3_6G052970 Cucumis sativus L. HOM05D003515 ORTHO05D004347 1.4e-26 123.2 94 68.1
ClCG01G025730 Citrullus lanatus HOM05D003515 ORTHO05D004347 1.8e-26 122.9 94 68.1
SGA_v2.0_scaffold298G47708 Striga asiatica HOM05D003515 ORTHO05D004347 1.8e-26 122.9 87 77.0
Cc09_g05170 Coffea canephora HOM05D003515 ORTHO05D004347 3.1e-26 122.1 84 81.0
AT5G44740 Arabidopsis thaliana HOM05D003515 ORTHO05D004347 4.0e-26 121.7 92 69.6
Oeu008987.4 Olea europaea HOM05D003515 ORTHO05D004347 4.0e-26 121.7 85 76.5
CANSAT35G1862 Cannabis sativa HOM05D003515 ORTHO05D004347 6.9e-26 120.9 96 67.7
Lsat_1_v5_gn_2_60141 Lactuca sativa HOM05D003515 ORTHO05D004347 6.9e-26 120.9 85 75.3
Migut.M02011 Erythranthe guttata HOM05D003515 ORTHO05D004347 9.0e-26 120.6 92 72.8
BcaNung07103 Brassica carinata HOM05D003515 ORTHO05D004347 1.2e-25 120.2 96 66.7
Ah.15g091880 Amaranthus hybridus HOM05D003515 ORTHO05D004347 1.5e-25 119.8 85 75.3
Nitab4.5_0003190g0020 Nicotiana tabacum HOM05D003515 ORTHO05D004347 1.5e-25 119.8 87 73.6
PGSC0003DMG401001013 Solanum tuberosum HOM05D003515 ORTHO05D004347 1.5e-25 119.8 86 74.4
TPR.G23817 Trifolium pratense HOM05D005903 ORTHO05D007293 1.5e-25 119.8 84 75.0
Carub.0008s0352 Capsella rubella HOM05D003515 ORTHO05D004347 2.0e-25 119.4 96 65.6
Lalb_Chr13g0293411 Lupinus albus HOM05D003515 ORTHO05D004347 2.0e-25 119.4 84 75.0
Thhalv10000807m.g Eutrema salsugineum HOM05D003515 ORTHO05D004347 2.6e-25 119.0 96 66.7
RcHm_v2.0_Chr4g0406921 Rosa chinensis HOM05D003515 ORTHO05D004347 2.6e-25 119.0 96 67.7
RcHm_v2.0_Chr5g0021111 Rosa chinensis HOM05D003515 ORTHO05D004347 2.6e-25 119.0 99 68.7
Sp2g09580 Schrenkiella parvula HOM05D003515 ORTHO05D004347 2.6e-25 119.0 92 68.5
Solyc01g034150.4 Solanum lycopersicum HOM05D003515 ORTHO05D004347 3.4e-25 118.6 86 73.3
Aa31LG9G8430 Aethionema arabicum HOM05D003515 ORTHO05D004347 4.5e-25 118.2 96 64.6
Sopen01g017810 Solanum pennellii HOM05D003515 ORTHO05D004347 4.5e-25 118.2 86 73.3
Ca_18232_v3 Cicer arietinum L. HOM05D003515 ORTHO05D004347 5.8e-25 117.9 84 73.8
Nitab4.5_0000254g0140 Nicotiana tabacum HOM05D003515 ORTHO05D004347 5.8e-25 117.9 87 72.4
MSTRG.2877 Avicennia marina HOM05D003515 ORTHO05D004347 7.6e-25 117.5 85 76.5
AUR62040332 Chenopodium quinoa HOM05D003515 ORTHO05D004347 1.3e-24 116.7 83 78.3
Glyma.08G088900 Glycine max HOM05D003515 ORTHO05D004347 1.3e-24 116.7 96 62.5
Medtr4g094755 Medicago truncatula HOM05D003515 ORTHO05D004347 1.3e-24 116.7 84 72.6
Psat7g087560 Pisum sativum HOM05D003515 ORTHO05D004347 1.3e-24 116.7 84 71.4
CARHR178160 Cardamine hirsuta HOM05D003515 ORTHO05D004347 1.7e-24 116.3 92 65.2
ATR0763G272 Amborella trichopoda HOM05D003515 ORTHO05D004347 2.2e-24 115.9 93 64.5
A06p46940 Brassica napus HOM05D003515 ORTHO05D004347 2.2e-24 115.9 97 66.0
BraA06t27567Z Brassica rapa HOM05D003515 ORTHO05D004347 2.2e-24 115.9 97 66.0
arahy.Tifrunner.gnm1.ann1.NQ3I2Y Arachis hypogaea HOM05D003515 ORTHO05D004347 2.9e-24 115.5 95 65.3
CAN.G391.1 Capsicum annuum HOM05D003515 ORTHO05D004347 2.9e-24 115.5 89 69.7
Aqoxy2G04030 Aquilegia oxysepala HOM05D003515 ORTHO05D004347 4.9e-24 114.8 91 64.8
arahy.Tifrunner.gnm1.ann1.ZWBN17 Arachis hypogaea HOM05D003515 ORTHO05D004347 4.9e-24 114.8 83 74.7
C07p27710 Brassica napus HOM05D003515 ORTHO05D004347 6.5e-24 114.4 97 64.9
BolC7t43303H Brassica oleracea HOM05D003515 ORTHO05D004347 6.5e-24 114.4 97 64.9
Cpa.g.sc30.112 Carica papaya HOM05D003515 ORTHO05D004347 6.5e-24 114.4 83 75.9
Peaxi162Scf00151g00110 Petunia axillaris HOM05D003515 ORTHO05D004347 8.4e-24 114.0 84 73.8
HPP92_014201 Vanilla planifolia HOM05D003515 ORTHO05D004347 8.4e-24 114.0 83 72.3
HPP92_026459 Vanilla planifolia HOM05D003515 ORTHO05D004347 8.4e-24 114.0 83 72.3
SHI28054 Sapria himalayana HOM05D003515 ORTHO05D004347 1.4e-23 113.2 88 70.5
PGR004G1774 Punica granatum HOM05D003515 ORTHO05D004347 1.9e-23 112.8 84 72.6
BcaNung06821 Brassica carinata HOM05D003515 ORTHO05D004347 2.5e-23 112.5 101 67.3
Phvul.002G188000 Phaseolus vulgaris HOM05D003515 ORTHO05D004347 4.2e-23 111.7 97 62.9
Lj4g0010619 Lotus japonicus HOM05D003515 ORTHO05D004347 5.5e-23 111.3 84 70.2
Sed0024374 Sechium edule HOM05D003515 ORTHO05D004347 5.5e-23 111.3 93 63.4
THA.LOC104812921 Tarenaya hassleriana HOM05D003515 ORTHO05D004347 5.5e-23 111.3 83 68.7
VMungo0251G3194 Vigna mungo HOM05D003515 ORTHO05D004347 1.2e-22 110.2 84 69.0
SEGI_02016 Sequoiadendron giganteum HOM05D003515 ORTHO05D004347 4.6e-22 108.2 86 65.1
Os01g0757800 Oryza sativa ssp. japonica HOM05D003515 ORTHO05D004347 1.3e-21 106.7 83 71.1
Zm00001eb277800 Zea mays HOM05D003515 ORTHO05D004347 2.5e-20 102.4 84 67.9
unitig_748.g8071 Utricularia gibba HOM05D003515 ORTHO05D004347 5.7e-20 101.3 84 63.1
Zm00001eb191750 Zea mays HOM05D003515 ORTHO05D004347 9.7e-20 100.5 84 66.7
Zm00001eb225590 Zea mays HOM05D003515 ORTHO05D004347 9.7e-20 100.5 84 66.7
Zm00001eb031780 Zea mays HOM05D003515 ORTHO05D004347 2.2e-19 99.4 84 66.7
Zm00001eb070690 Zea mays HOM05D003515 ORTHO05D004347 2.2e-19 99.4 84 66.7
Zm00001eb303570 Zea mays HOM05D003515 ORTHO05D004347 2.2e-19 99.4 84 66.7
Zm00001eb388450 Zea mays HOM05D003515 ORTHO05D004347 2.2e-19 99.4 84 66.7
Zm00001eb440130 Zea mays HOM05D003515 ORTHO05D004347 2.2e-19 99.4 84 66.7
Zm00001eb441390 Zea mays HOM05D003515 ORTHO05D004347 2.2e-19 99.4 84 66.7
Zm00001eb441960 Zea mays HOM05D003515 ORTHO05D004347 2.2e-19 99.4 84 66.7
Zm00001eb203100 Zea mays HOM05D003515 ORTHO05D004347 1.4e-18 96.7 84 66.7
AagrBONN_evm.TU.Sc2ySwM_228.4437 Anthoceros agrestis HOM05D003515 ORTHO05D004347 6.9e-18 94.4 96 51.0
Zm00001eb371460 Zea mays HOM05D003515 ORTHO05D004347 9.0e-18 94.0 76 68.4
SMO118G0165 Selaginella moellendorffii HOM05D003515 ORTHO05D004347 2.6e-17 92.4 99 53.5
Pp3c8_17250 Physcomitrium patens HOM05D003515 ORTHO05D004347 5.0e-16 88.2 92 51.1
CBR_g30567 Chara braunii HOM05D003515 ORTHO05D004347 8.5e-16 87.4 87 52.9
Mapoly0100s0031 Marchantia polymorpha HOM05D003515 ORTHO05D004347 1.6e-14 83.2 86 52.3
CSS0033549 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 8.8e-13 77.4 69 69.6
CDE06G0434 Ceratophyllum demersum HOM05D003515 ORTHO05D004347 3.7e-11 72.0 64 62.5
Cre12.g524150 Chlamydomonas reinhardtii HOM05D003515 ORTHO05D004347 6.9e-10 67.8 68 54.4
Psat7g087520 Pisum sativum HOM05D003515 ORTHO05D004347 1.5e-09 66.6 65 60.0
PRCOL_00006902 Prasinoderma coloniale HOM05D003515 ORTHO05D004347 4.2e-07 58.5 97 42.3


User provided reference genes

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