Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007717 Camellia sinensis var. sinensis HOM05D018314 ORTHO05D014695 4.8e-157 557.8 274 100.0
CSS0022799 Camellia sinensis var. sinensis HOM05D018314 ORTHO05D014695 6.3e-101 371.3 275 72.0
CSS0039970 Camellia sinensis var. sinensis HOM05D018314 ORTHO05D014695 8.6e-90 334.3 276 67.8
CSS0044296 Camellia sinensis var. sinensis HOM05D028273 ORTHO05D014695 5.3e-47 192.2 167 61.1
CSS0033172 Camellia sinensis var. sinensis HOM05D018314 ORTHO05D014695 4.9e-29 132.5 90 78.9
Hma1.2p1_1373F.1_g278750 Hydrangea macrophylla HOM05D000101 ORTHO05D014695 1.5e-17 94.4 140 42.1
Hma1.2p1_2663F.1_g326426 Hydrangea macrophylla HOM05D000101 ORTHO05D014695 1.5e-17 94.4 140 42.1
Hma1.2p1_0435F.1_g152390 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 4.3e-17 92.8 137 43.1
CSS0041386 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D000089 1.3e-16 91.3 144 47.2
CSS0035156 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D000089 2.2e-16 90.5 144 47.9
Hma1.2p1_0435F.1_g152400 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 4.8e-16 89.4 140 40.0
Ciclev10010335m.g Citrus clementina HOM05D000101 ORTHO05D000089 1.7e-13 80.9 137 35.8
Hma1.2p1_1051F.1_g252060 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 3.8e-13 79.7 140 39.3
vmacro04727 Vaccinium macrocarpon HOM05D000101 ORTHO05D000089 1.4e-12 77.8 138 33.3
Hma1.2p1_2793F.1_g328630 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 1.9e-12 77.4 140 38.6
Thecc.07G077700 Theobroma cacao HOM05D000101 ORTHO05D000089 1.9e-12 77.4 136 34.6
Ciclev10007349m.g Citrus clementina HOM05D000101 ORTHO05D000089 2.5e-12 77.0 141 34.8
Atru.chr2.1124 Acer truncatum HOM05D000101 ORTHO05D014695 5.5e-12 75.9 138 39.1
Duzib213G0162 Durio zibethinus HOM05D000101 ORTHO05D000089 1.6e-11 74.3 137 32.1
Rhsim11G0146400 Rhododendron simsii HOM05D004882 ORTHO05D000089 2.7e-11 73.6 140 34.3
vmacro16169 Vaccinium macrocarpon HOM05D000101 ORTHO05D000089 2.7e-11 73.6 140 36.4
Oeu042917.1 Olea europaea HOM05D000101 ORTHO05D000089 6.1e-11 72.4 140 34.3
QL09p032708 Quercus lobata HOM05D000101 ORTHO05D000089 6.1e-11 72.4 190 32.1
CSS0008325 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D000089 7.9e-11 72.0 143 35.7
QL12p023483 Quercus lobata HOM05D000101 ORTHO05D000089 1.4e-10 71.2 136 36.0
Rhsim11G0147100 Rhododendron simsii HOM05D000101 ORTHO05D000089 1.8e-10 70.9 139 34.5
QL05p077009 Quercus lobata HOM05D000101 ORTHO05D000089 8.8e-10 68.6 215 28.8
Duzib268G0039 Durio zibethinus HOM05D000101 ORTHO05D000089 1.1e-09 68.2 137 32.1
Atru.chr2.2804 Acer truncatum HOM05D000101 ORTHO05D000089 2.6e-09 67.0 137 30.7
MBI18_g07589_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D006096 2.6e-09 67.0 109 37.6
QL05p000733 Quercus lobata HOM05D000101 ORTHO05D000089 3.3e-09 66.6 140 34.3
QL05p000741 Quercus lobata HOM05D000101 ORTHO05D000089 3.3e-09 66.6 140 34.3
QL05p000767 Quercus lobata HOM05D000101 ORTHO05D000089 3.3e-09 66.6 140 34.3
Rhsim11G0146700 Rhododendron simsii HOM05D000101 ORTHO05D000089 4.4e-09 66.2 140 34.3
Duzib238G0002 Durio zibethinus HOM05D000101 ORTHO05D000089 5.7e-09 65.9 138 31.2
Duzib268G1134 Durio zibethinus HOM05D000101 ORTHO05D000089 5.7e-09 65.9 137 31.4
Atru.chr2.2797 Acer truncatum HOM05D000101 ORTHO05D000089 7.4e-09 65.5 134 29.9
Cfa020510 Carpinus fangiana HOM05D000101 ORTHO05D000089 7.4e-09 65.5 134 32.1
CSS0004355 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D000089 9.7e-09 65.1 143 33.6
Ciclev10027440m.g Citrus clementina HOM05D000101 ORTHO05D000089 9.7e-09 65.1 110 35.5
Actinidia18750 Actinidia chinensis HOM05D000101 ORTHO05D000089 1.7e-08 64.3 137 31.4
Dinv29323 Davidia involucrata HOM05D000101 ORTHO05D000089 1.7e-08 64.3 103 36.9
Gohir.A11G285400 Gossypium hirsutum HOM05D000101 ORTHO05D000089 1.7e-08 64.3 136 30.9
MBI02_g35906_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 1.7e-08 64.3 112 33.0
MBI11_g13896_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 1.7e-08 64.3 140 32.9
MBI11_g42046_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 1.7e-08 64.3 140 32.9
Ciclev10026931m.g Citrus clementina HOM05D000101 ORTHO05D000089 2.2e-08 63.9 137 30.7
Dinv29321 Davidia involucrata HOM05D000101 ORTHO05D007021 2.2e-08 63.9 103 36.9
EL10Ac4g08089 Beta vulgaris HOM05D000101 ORTHO05D000089 3.7e-08 63.2 108 31.5
MBI11_g05440_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 3.7e-08 63.2 150 30.7
QL08p019038 Quercus lobata HOM05D000101 ORTHO05D000089 3.7e-08 63.2 118 33.1
Ciclev10027601m.g Citrus clementina HOM05D000101 ORTHO05D000089 4.8e-08 62.8 137 30.7
Thecc.07G078200 Theobroma cacao HOM05D000101 ORTHO05D000089 4.8e-08 62.8 141 31.2
Duzib187G0797 Durio zibethinus HOM05D000101 ORTHO05D000089 6.3e-08 62.4 139 28.8
Duzib213G0389 Durio zibethinus HOM05D000101 ORTHO05D000089 6.3e-08 62.4 137 32.1
Rhsim04G0017900 Rhododendron simsii HOM05D000101 ORTHO05D000089 6.3e-08 62.4 141 32.6
Gohir.D11G296664 Gossypium hirsutum HOM05D000101 ORTHO05D000089 1.1e-07 61.6 139 29.5
QL08p018598 Quercus lobata HOM05D000101 ORTHO05D000089 1.1e-07 61.6 134 30.6
Dinv29328 Davidia involucrata HOM05D000101 ORTHO05D000089 1.4e-07 61.2 103 35.9
QL02p080444 Quercus lobata HOM05D000101 ORTHO05D000089 1.4e-07 61.2 137 30.7
Ah.06g183650 Amaranthus hybridus HOM05D000101 ORTHO05D000089 1.8e-07 60.8 110 29.1
Haze_09523 Corylus avellana HOM05D000101 ORTHO05D000089 1.8e-07 60.8 112 34.8
Duzib213G1018 Durio zibethinus HOM05D000101 ORTHO05D000089 1.8e-07 60.8 137 32.8
Gohir.A11G282900 Gossypium hirsutum HOM05D000101 ORTHO05D000089 1.8e-07 60.8 139 30.2
QL93p2023_0071 Quercus lobata HOM05D000101 ORTHO05D000089 1.8e-07 60.8 134 30.6
Thecc.07G072600 Theobroma cacao HOM05D000101 ORTHO05D000089 1.8e-07 60.8 134 30.6
Thecc.07G078600 Theobroma cacao HOM05D000101 ORTHO05D000089 1.8e-07 60.8 137 30.7
Ciclev10024814m.g Citrus clementina HOM05D000101 ORTHO05D000089 2.4e-07 60.5 138 31.9
Dinv19546 Davidia involucrata HOM05D000101 ORTHO05D000089 2.4e-07 60.5 137 28.5
MBI11_g05438_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 2.4e-07 60.5 138 32.6
Rhsim11G0119000 Rhododendron simsii HOM05D000101 ORTHO05D000089 2.4e-07 60.5 151 35.1
Ciclev10024821m.g Citrus clementina HOM05D000101 ORTHO05D000089 3.1e-07 60.1 137 31.4
QL08p018201 Quercus lobata HOM05D000101 ORTHO05D000089 3.1e-07 60.1 141 29.1
Rhsim09G0132900 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.1e-07 60.1 89 39.3
QL08p018687 Quercus lobata HOM05D000101 ORTHO05D000089 4.1e-07 59.7 134 29.9
Gohir.D11G296744 Gossypium hirsutum HOM05D000101 ORTHO05D000089 5.3e-07 59.3 139 28.8
Gorai.007G321000 Gossypium raimondii HOM05D000101 ORTHO05D000089 5.3e-07 59.3 139 28.8
Dinv00143 Davidia involucrata HOM05D000101 ORTHO05D000089 6.9e-07 58.9 139 30.2
Ciclev10024820m.g Citrus clementina HOM05D000101 ORTHO05D000089 9.1e-07 58.5 119 31.9
Duzib268G1835 Durio zibethinus HOM05D000101 ORTHO05D000089 9.1e-07 58.5 137 31.4
MBI11_g25048_MAGBIO Magnolia biondii HOM05D018314 ORTHO05D014695 9.1e-07 58.5 93 34.4
MBI11_g25856_MAGBIO Magnolia biondii HOM05D001013 ORTHO05D001703 9.1e-07 58.5 133 30.8
Gohir.D11G296616 Gossypium hirsutum HOM05D000101 ORTHO05D000089 1.5e-06 57.8 137 29.2
Gorai.007G319900 Gossypium raimondii HOM05D000101 ORTHO05D000089 1.5e-06 57.8 137 29.2
QL08p018373 Quercus lobata HOM05D000101 ORTHO05D000089 1.5e-06 57.8 139 30.2
Thecc.03G040300 Theobroma cacao HOM05D000101 ORTHO05D000089 2.0e-06 57.4 103 36.9
Thecc.07G072400 Theobroma cacao HOM05D000101 ORTHO05D000089 2.0e-06 57.4 137 32.8
Gohir.A01G046050 Gossypium hirsutum HOM05D000101 ORTHO05D000089 2.6e-06 57.0 138 27.5
AUR62029339 Chenopodium quinoa HOM05D000101 ORTHO05D000089 3.4e-06 56.6 99 28.3
Dinv02505 Davidia involucrata HOM05D000101 ORTHO05D000089 3.4e-06 56.6 138 26.1
Dinv19549 Davidia involucrata HOM05D000101 ORTHO05D000089 3.4e-06 56.6 138 26.1
Dinv10264 Davidia involucrata HOM05D000101 ORTHO05D000089 4.5e-06 56.2 138 30.4
Gohir.D08G253700 Gossypium hirsutum HOM05D000101 ORTHO05D000089 4.5e-06 56.2 141 31.2
Gohir.D11G296640 Gossypium hirsutum HOM05D000101 ORTHO05D000089 4.5e-06 56.2 137 29.2
Gorai.004G270600 Gossypium raimondii HOM05D000101 ORTHO05D000089 4.5e-06 56.2 141 31.2
Dinv05214 Davidia involucrata HOM05D000101 ORTHO05D000089 5.9e-06 55.8 116 28.4
Gohir.D05G353000 Gossypium hirsutum HOM05D000101 ORTHO05D000089 5.9e-06 55.8 140 32.1
Gohir.D05G354800 Gossypium hirsutum HOM05D000101 ORTHO05D000089 5.9e-06 55.8 140 31.4
MBI11_g05452_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 5.9e-06 55.8 99 29.3
MBI18_g07566_MAGBIO Magnolia biondii HOM05D018314 ORTHO05D013107 5.9e-06 55.8 104 34.6
PGR031G0716 Punica granatum HOM05D000101 ORTHO05D000089 5.9e-06 55.8 140 27.1
TWI39G0378 Tripterygium wilfordii HOM05D000101 ORTHO05D000089 5.9e-06 55.8 111 33.3
CiPaw.09G122200 Carya illinoinensis HOM05D000101 ORTHO05D000089 7.7e-06 55.5 108 27.8
AUR62030791 Chenopodium quinoa HOM05D000101 ORTHO05D000089 7.7e-06 55.5 143 25.2
Gohir.D11G296632 Gossypium hirsutum HOM05D000101 ORTHO05D000089 7.7e-06 55.5 137 29.2
MBI11_g25852_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 7.7e-06 55.5 86 31.4


User provided reference genes

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