Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007706 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 3.1e-93 345.1 174 100.0
CSS0044288 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 3.1e-93 345.1 174 100.0
CSS0013880 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 3.3e-87 325.1 173 95.4
CSS0028445 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 6.9e-77 290.8 173 89.0
Actinidia18107 Actinidia chinensis HOM05D005159 ORTHO05D006237 9.4e-58 227.3 153 77.1
Dinv33896 Davidia involucrata HOM05D005159 ORTHO05D006237 8.8e-56 220.7 137 80.3
TAR371G0967 Trochodendron aralioides HOM05D005159 ORTHO05D006237 6.9e-53 211.1 152 73.0
MSTRG.15424 Avicennia marina HOM05D005159 ORTHO05D006237 1.2e-52 210.3 157 68.8
Nn1g09575 Nelumbo nucifera HOM05D005159 ORTHO05D006237 2.6e-52 209.1 152 70.4
Ciclev10012260m.g Citrus clementina HOM05D005159 ORTHO05D006237 3.4e-52 208.8 155 69.0
Lju237A1T66 Lonicera japonica HOM05D005159 ORTHO05D006237 1.0e-51 207.2 131 76.3
SGA_v2.0_scaffold10G05141 Striga asiatica HOM05D005159 ORTHO05D006237 1.9e-50 203.0 157 63.7
MBI15_g18197_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 2.5e-50 202.6 154 67.5
Peaxi162Scf00479g00439 Petunia axillaris HOM05D005159 ORTHO05D006237 5.5e-50 201.4 138 68.8
GSVIVG01036491001 Vitis vinifera HOM05D005159 ORTHO05D006237 1.2e-49 200.3 152 68.4
Potri.017G108700 Populus trichocarpa HOM05D005159 ORTHO05D006237 1.0e-48 197.2 148 68.9
CDE01G0131 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 1.4e-48 196.8 156 68.6
Prupe.3G244000 Prunus persica HOM05D005159 ORTHO05D006237 2.3e-48 196.1 124 76.6
Migut.K00872 Erythranthe guttata HOM05D005159 ORTHO05D006237 2.6e-47 192.6 132 72.0
Cc08_g12050 Coffea canephora HOM05D005159 ORTHO05D006237 3.3e-47 192.2 139 68.3
Sabra04G0075100 Salix brachista HOM05D005159 ORTHO05D006237 3.3e-47 192.2 153 64.7
Solyc03g046350.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 3.3e-47 192.2 159 60.4
Sopen03g009860 Solanum pennellii HOM05D005159 ORTHO05D006237 3.3e-47 192.2 159 60.4
Nitab4.5_0001982g0030 Nicotiana tabacum HOM05D005159 ORTHO05D006237 5.7e-47 191.4 158 60.1
Peaxi162Scf01056g00019 Petunia axillaris HOM05D005159 ORTHO05D006237 5.7e-47 191.4 158 60.8
PGSC0003DMG400018775 Solanum tuberosum HOM05D005159 ORTHO05D006237 5.7e-47 191.4 157 61.1
TAR629G0318 Trochodendron aralioides HOM05D005159 ORTHO05D006237 5.7e-47 191.4 135 73.3
Sc10g0001500 Simmondsia chinensis HOM05D005159 ORTHO05D006237 7.4e-47 191.0 154 66.2
Cpa.g.sc70.15 Carica papaya HOM05D005159 ORTHO05D006237 1.7e-46 189.9 164 61.0
SalBow1G7987 Salvia bowleyana HOM05D005159 ORTHO05D006237 1.7e-46 189.9 160 63.8
Duzib211G0079 Durio zibethinus HOM05D005159 ORTHO05D006237 2.2e-46 189.5 153 64.7
Hund27686 Selenicereus undatus HOM05D005159 ORTHO05D006237 2.2e-46 189.5 159 62.3
Hund27687 Selenicereus undatus HOM05D005159 ORTHO05D006237 2.2e-46 189.5 159 62.3
THA.LOC104805544 Tarenaya hassleriana HOM05D005159 ORTHO05D006237 2.2e-46 189.5 153 67.3
CAN.G497.25 Capsicum annuum HOM05D005159 ORTHO05D006237 3.7e-46 188.7 166 57.2
MBI15_g38433_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 4.8e-46 188.3 155 64.5
Potri.004G106900 Populus trichocarpa HOM05D005159 ORTHO05D006237 4.8e-46 188.3 161 61.5
CsaV3_5G013180 Cucumis sativus L. HOM05D005159 ORTHO05D006237 6.3e-46 188.0 158 62.7
Nitab4.5_0006224g0050 Nicotiana tabacum HOM05D005159 ORTHO05D006237 8.2e-46 187.6 158 59.5
TWI32G0838 Tripterygium wilfordii HOM05D005159 ORTHO05D006237 8.2e-46 187.6 157 65.0
COL.COLO4_37042 Corchorus olitorius HOM05D005159 ORTHO05D006237 1.4e-45 186.8 156 61.5
MELO3C020033.2 Cucumis melo HOM05D005159 ORTHO05D006237 2.4e-45 186.0 158 62.0
Phvul.008G006700 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 3.1e-45 185.7 154 64.3
PGSC0003DMG400010100 Solanum tuberosum HOM05D005159 ORTHO05D006237 4.1e-45 185.3 166 57.2
CANSAT21G0179 Cannabis sativa HOM05D005159 ORTHO05D006237 3.5e-44 182.2 162 59.3
Solyc02g089600.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 3.5e-44 182.2 157 58.6
Ca_13657_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 5.9e-44 181.4 155 63.2
ClCG11G001130 Citrullus lanatus HOM05D005159 ORTHO05D006237 5.9e-44 181.4 157 61.1
Glyma.07G204700 Glycine max HOM05D005159 ORTHO05D006237 1.0e-43 180.6 155 63.9
Medtr4g051625 Medicago truncatula HOM05D005159 ORTHO05D006237 1.0e-43 180.6 152 59.9
PGR004G1892 Punica granatum HOM05D005159 ORTHO05D006237 1.0e-43 180.6 159 59.7
Sed0024356 Sechium edule HOM05D005159 ORTHO05D006237 1.0e-43 180.6 158 60.1
arahy.Tifrunner.gnm1.ann1.MEN3PN Arachis hypogaea HOM05D005159 ORTHO05D006237 1.7e-43 179.9 138 65.9
DCAR_026285 Daucus carota HOM05D005159 ORTHO05D006237 2.2e-43 179.5 136 67.6
Manes.01G106500 Manihot esculenta HOM05D005159 ORTHO05D006237 2.2e-43 179.5 154 63.0
unitig_61.g26382 Utricularia gibba HOM05D005159 ORTHO05D006237 2.2e-43 179.5 115 73.9
Eucgr.I02096 Eucalyptus grandis HOM05D005159 ORTHO05D006237 3.8e-43 178.7 157 59.9
Oeu062202.1 Olea europaea HOM05D005159 ORTHO05D006237 3.8e-43 178.7 118 72.9
MD09G1079700 Malus domestica HOM05D005159 ORTHO05D006237 5.0e-43 178.3 126 70.6
Actinidia36292 Actinidia chinensis HOM05D005159 ORTHO05D006237 8.5e-43 177.6 105 80.0
MD17G1070200 Malus domestica HOM05D005159 ORTHO05D006237 8.5e-43 177.6 125 70.4
Ca_26327_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 1.1e-42 177.2 155 59.4
Sed0002827 Sechium edule HOM05D005159 ORTHO05D006237 1.1e-42 177.2 155 62.6
TPR.G37714 Trifolium pratense HOM05D005159 ORTHO05D006237 1.1e-42 177.2 154 61.0
AUR62016605 Chenopodium quinoa HOM05D005159 ORTHO05D006237 2.5e-42 176.0 157 59.9
Thecc.04G145900 Theobroma cacao HOM05D005159 ORTHO05D006237 2.5e-42 176.0 135 65.9
PSO017G6426 Papaver somniferum HOM05D005159 ORTHO05D006237 5.5e-42 174.9 127 66.1
TPR.G28602 Trifolium pratense HOM05D005159 ORTHO05D006237 5.5e-42 174.9 157 57.3
Gohir.A13G118100 Gossypium hirsutum HOM05D005159 ORTHO05D006237 7.2e-42 174.5 155 60.6
Psat7g186040 Pisum sativum HOM05D002527 ORTHO05D002865 7.2e-42 174.5 151 61.6
EL10Ac7g16490 Beta vulgaris HOM05D005159 ORTHO05D006237 2.1e-41 172.9 152 59.2
CDE02G0002 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 6.1e-41 171.4 107 77.6
Aa31LG9G16930 Aethionema arabicum HOM05D005159 ORTHO05D006237 8.0e-41 171.0 155 59.4
Gohir.D13G121900 Gossypium hirsutum HOM05D005159 ORTHO05D006237 8.0e-41 171.0 157 58.6
Gorai.013G136600 Gossypium raimondii HOM05D005159 ORTHO05D006237 8.0e-41 171.0 155 59.4
Medtr1g090650 Medicago truncatula HOM05D005159 ORTHO05D006237 8.0e-41 171.0 132 64.4
Rhsim08G0081100 Rhododendron simsii HOM05D005159 ORTHO05D006237 1.4e-40 170.2 156 64.1
BcaB06g27239 Brassica carinata HOM05D005159 ORTHO05D006237 4.0e-40 168.7 154 59.1
FvH4_6g45790 Fragaria vesca HOM05D005159 ORTHO05D006237 1.5e-39 166.8 135 63.7
FAN09G0042 Fragaria x ananassa HOM05D005159 ORTHO05D006237 1.5e-39 166.8 135 63.7
PSO478G0642 Papaver somniferum HOM05D005159 ORTHO05D006237 2.6e-39 166.0 129 62.8
Aqoxy3G00614 Aquilegia oxysepala HOM05D005159 ORTHO05D006237 3.3e-39 165.6 156 58.3
AL7G51700 Arabidopsis lyrata HOM05D005159 ORTHO05D006237 7.5e-39 164.5 157 56.7
BcaC02g09665 Brassica carinata HOM05D005159 ORTHO05D006237 7.5e-39 164.5 121 66.1
C04p45340 Brassica napus HOM05D005159 ORTHO05D006237 7.5e-39 164.5 121 66.1
BolC4t26116H Brassica oleracea HOM05D005159 ORTHO05D006237 7.5e-39 164.5 121 66.1
BraA04t16828Z Brassica rapa HOM05D005159 ORTHO05D006237 7.5e-39 164.5 121 66.1
Medtr8g085800 Medicago truncatula HOM05D005159 ORTHO05D006237 7.5e-39 164.5 111 72.1
vmacro18090 Vaccinium macrocarpon HOM05D005159 ORTHO05D006237 7.5e-39 164.5 157 61.8
Ah.15g094970 Amaranthus hybridus HOM05D005159 ORTHO05D006237 1.3e-38 163.7 153 56.9
Psat6g166480 Pisum sativum HOM05D005159 ORTHO05D006237 2.2e-38 162.9 135 62.2
Sp7g03200 Schrenkiella parvula HOM05D005159 ORTHO05D006237 2.2e-38 162.9 124 64.5
Ah.08g217340 Amaranthus hybridus HOM05D005159 ORTHO05D006237 2.8e-38 162.5 127 62.2
A04p11610 Brassica napus HOM05D005159 ORTHO05D006237 2.8e-38 162.5 121 65.3
Atru.chr11.1725 Acer truncatum HOM05D005159 ORTHO05D006237 4.8e-38 161.8 206 48.5
arahy.Tifrunner.gnm1.ann1.VE7QKQ Arachis hypogaea HOM05D005159 ORTHO05D006237 6.3e-38 161.4 160 55.6
CiPaw.03G007500 Carya illinoinensis HOM05D005159 ORTHO05D006237 6.3e-38 161.4 157 57.3
Glyma.13G171200 Glycine max HOM05D005159 ORTHO05D006237 6.3e-38 161.4 107 72.0
HanXRQChr03g0078031 Helianthus annuus HOM05D005159 ORTHO05D006237 6.3e-38 161.4 156 55.8
Lj7A7T32 Lonicera japonica HOM05D005159 ORTHO05D006237 1.1e-37 160.6 137 63.5
Carub.0007s3714 Capsella rubella HOM05D005159 ORTHO05D006237 1.4e-37 160.2 137 56.9
ECA240G3626 Erigeron canadensis HOM05D005159 ORTHO05D006237 1.4e-37 160.2 155 53.5
C06p18340 Brassica napus HOM05D005159 ORTHO05D006237 1.8e-37 159.8 155 58.1
BolC6t37046H Brassica oleracea HOM05D005159 ORTHO05D006237 1.8e-37 159.8 155 58.1
HPP92_015315 Vanilla planifolia HOM05D005159 ORTHO05D006237 2.4e-37 159.5 154 54.5
Thhalv10028147m.g Eutrema salsugineum HOM05D005159 ORTHO05D006237 3.1e-37 159.1 155 56.1
AT5G38720 Arabidopsis thaliana HOM05D005159 ORTHO05D006237 5.3e-37 158.3 155 54.8
Lsat_1_v5_gn_8_24161 Lactuca sativa HOM05D005159 ORTHO05D006237 9.1e-37 157.5 142 57.0
AUR62011452 Chenopodium quinoa HOM05D005159 ORTHO05D006237 1.6e-36 156.8 194 48.5
Haze_14082 Corylus avellana HOM05D005159 ORTHO05D006237 4.5e-36 155.2 205 46.3
QL02p054338 Quercus lobata HOM05D005159 ORTHO05D006237 4.5e-36 155.2 205 46.3
Os02g0728700 Oryza sativa ssp. japonica HOM05D005159 ORTHO05D006237 1.0e-35 154.1 130 60.8
FAN02G2008 Fragaria x ananassa HOM05D005159 ORTHO05D006237 1.1e-34 150.6 205 47.3
FAN05G5180 Fragaria x ananassa HOM05D005159 ORTHO05D006237 1.1e-34 150.6 138 58.7
RcHm_v2.0_Chr2g0163971 Rosa chinensis HOM05D005159 ORTHO05D006237 4.2e-34 148.7 204 48.0
VMungo1383G3720 Vigna mungo HOM05D005159 ORTHO05D006237 4.7e-33 145.2 154 54.5
Lalb_Chr18g0059201 Lupinus albus HOM05D005159 ORTHO05D006237 1.0e-32 144.1 154 51.3
Zm00001eb253420 Zea mays HOM05D005159 ORTHO05D006237 1.4e-32 143.7 147 54.4
Sopen02g034320 Solanum pennellii HOM05D005159 ORTHO05D006237 1.8e-32 143.3 158 49.4
Lj6g0020881 Lotus japonicus HOM05D005159 ORTHO05D006237 2.0e-31 139.8 152 53.3
ATR0691G244 Amborella trichopoda HOM05D005159 ORTHO05D006237 1.3e-30 137.1 154 51.9
Nn8g41096 Nelumbo nucifera HOM05D005159 ORTHO05D006237 1.3e-30 137.1 157 50.3
Phvul.001G061500 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 1.3e-30 137.1 154 51.9
TAR629G0746 Trochodendron aralioides HOM05D005159 ORTHO05D006237 3.7e-30 135.6 136 56.6
AUR62026768 Chenopodium quinoa HOM05D005159 ORTHO05D006237 1.2e-28 130.6 107 57.9
BcaC08g44401 Brassica carinata HOM05D005159 ORTHO05D006237 1.0e-27 127.5 107 60.7
SEGI_21798 Sequoiadendron giganteum HOM05D005159 ORTHO05D006237 1.9e-26 123.2 105 57.1
Mapoly0058s0026 Marchantia polymorpha HOM05D005159 ORTHO05D006237 1.6e-25 120.2 116 50.0
AUR62013504 Chenopodium quinoa HOM05D000258 ORTHO05D006237 2.8e-25 119.4 89 66.3
SMO196G0176 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 4.4e-23 112.1 107 52.3
arahy.Tifrunner.gnm1.ann1.3J3UL0 Arachis hypogaea HOM05D005159 ORTHO05D006237 1.3e-22 110.5 105 56.2
Pp3c10_24110 Physcomitrium patens HOM05D005159 ORTHO05D006237 2.2e-22 109.8 109 52.3
SMO234G0023 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 6.3e-22 108.2 150 42.7
Oeu062205.1 Olea europaea HOM05D005159 ORTHO05D006237 7.8e-20 101.3 85 63.5
CARHR291790 Cardamine hirsuta HOM05D005159 ORTHO05D006237 1.1e-18 97.4 116 46.6
FAN14G1445 Fragaria x ananassa HOM05D005159 ORTHO05D006237 4.3e-18 95.5 75 65.3
AagrBONN_evm.TU.Sc2ySwM_369.363 Anthoceros agrestis HOM05D005159 ORTHO05D006237 4.7e-17 92.0 163 38.7
arahy.Tifrunner.gnm1.ann1.YDKP0V Arachis hypogaea HOM05D005159 ORTHO05D006237 4.6e-12 75.5 88 52.3
QL06p007211 Quercus lobata HOM05D005159 ORTHO05D006237 1.7e-11 73.6 57 64.9
CBR_g4867 Chara braunii HOM05D005159 ORTHO05D006237 2.3e-11 73.2 107 39.3
Cre01.g052200 Chlamydomonas reinhardtii HOM05D005159 ORTHO05D006237 1.5e-10 70.5 73 45.2
MCO13G254 Micromonas commoda HOM05D005159 ORTHO05D006237 2.5e-10 69.7 108 37.0
Dinv34878 Davidia involucrata HOM05D005159 ORTHO05D006237 6.8e-08 61.6 49 69.4


User provided reference genes

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