Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007702 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 8.5e-99 363.6 176 100.0
CSS0033501 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 3.9e-96 354.8 176 98.3
CSS0046634 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 3.9e-96 354.8 176 98.3
CSS0022527 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 2.0e-87 325.9 162 98.8
CSS0021914 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 3.1e-85 318.5 162 96.3
CSS0012413 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 5.9e-76 287.7 163 84.7
Dinv41871 Davidia involucrata HOM05D005203 ORTHO05D006383 3.8e-75 285.0 163 85.3
Rhsim11G0198000 Rhododendron simsii HOM05D005203 ORTHO05D006383 3.8e-75 285.0 164 83.5
Thecc.02G146000 Theobroma cacao HOM05D005203 ORTHO05D006383 1.5e-74 283.1 163 82.2
Atru.chr5.3533 Acer truncatum HOM05D005203 ORTHO05D006383 2.7e-73 278.9 163 81.0
Oeu006117.1 Olea europaea HOM05D005203 ORTHO05D006383 4.7e-73 278.1 161 81.4
Lj5A171G136 Lonicera japonica HOM05D005203 ORTHO05D006383 8.0e-73 277.3 163 79.8
Potri.004G206900 Populus trichocarpa HOM05D005203 ORTHO05D006383 8.0e-73 277.3 163 79.8
GSVIVG01002028001 Vitis vinifera HOM05D005203 ORTHO05D006383 1.8e-72 276.2 163 80.4
Lj1g0021981 Lotus japonicus HOM05D005203 ORTHO05D006383 4.0e-72 275.0 163 77.9
CiPaw.06G115500 Carya illinoinensis HOM05D005203 ORTHO05D006383 8.8e-72 273.9 163 79.1
Potri.009G168000 Populus trichocarpa HOM05D005203 ORTHO05D006383 8.8e-72 273.9 163 79.8
Prupe.8G179800 Prunus persica HOM05D005203 ORTHO05D006383 1.2e-71 273.5 163 79.8
Gohir.A12G013200 Gossypium hirsutum HOM05D005203 ORTHO05D006383 2.0e-71 272.7 163 77.3
Gohir.D12G014000 Gossypium hirsutum HOM05D005203 ORTHO05D006383 2.0e-71 272.7 163 77.3
Gorai.008G014000 Gossypium raimondii HOM05D005203 ORTHO05D006383 2.0e-71 272.7 163 77.3
MD05G1138700 Malus domestica HOM05D005203 ORTHO05D006383 2.0e-71 272.7 163 79.8
Cc09_g10810 Coffea canephora HOM05D005203 ORTHO05D006383 3.4e-71 271.9 163 78.5
Migut.B00006 Erythranthe guttata HOM05D005203 ORTHO05D006383 3.4e-71 271.9 163 77.3
CANSAT25G3783 Cannabis sativa HOM05D005203 ORTHO05D006383 4.4e-71 271.6 163 79.1
Ciclev10028418m.g Citrus clementina HOM05D005203 ORTHO05D006383 4.4e-71 271.6 163 77.9
MD10G1141600 Malus domestica HOM05D005203 ORTHO05D006383 4.4e-71 271.6 163 79.8
Dinv14173 Davidia involucrata HOM05D005203 ORTHO05D006383 5.7e-71 271.2 196 71.4
MSTRG.19946 Avicennia marina HOM05D005203 ORTHO05D006383 9.8e-71 270.4 163 78.5
QL11p056319 Quercus lobata HOM05D005203 ORTHO05D006383 9.8e-71 270.4 163 78.5
Glyma.04G000400 Glycine max HOM05D005203 ORTHO05D006383 2.2e-70 269.2 163 77.3
Glyma.06G000300 Glycine max HOM05D005203 ORTHO05D006383 2.8e-70 268.9 163 77.3
Manes.11G110000 Manihot esculenta HOM05D005203 ORTHO05D006383 2.8e-70 268.9 163 77.9
TWI75G1664 Tripterygium wilfordii HOM05D005203 ORTHO05D006383 2.8e-70 268.9 162 78.4
SalBow1G5214 Salvia bowleyana HOM05D005203 ORTHO05D006383 4.8e-70 268.1 163 77.9
FAN27G1508 Fragaria x ananassa HOM05D005203 ORTHO05D006383 8.3e-70 267.3 163 77.9
Cfa005369 Carpinus fangiana HOM05D005203 ORTHO05D006383 3.1e-69 265.4 161 77.6
MBI05_g33297_MAGBIO Magnolia biondii HOM05D005203 ORTHO05D006383 5.4e-69 264.6 163 76.7
Nitab4.5_0000783g0090 Nicotiana tabacum HOM05D005203 ORTHO05D006383 5.4e-69 264.6 161 77.6
PGSC0003DMG402014680 Solanum tuberosum HOM05D005203 ORTHO05D006383 5.4e-69 264.6 161 77.0
CiPaw.05G093000 Carya illinoinensis HOM05D005203 ORTHO05D006383 7.0e-69 264.2 161 78.9
Sed0018804 Sechium edule HOM05D005203 ORTHO05D006383 9.1e-69 263.8 161 77.0
Peaxi162Scf00362g00132 Petunia axillaris HOM05D005203 ORTHO05D006383 2.0e-68 262.7 161 77.6
Solyc01g112240.4 Solanum lycopersicum HOM05D005203 ORTHO05D006383 2.0e-68 262.7 161 75.8
Sopen01g054300 Solanum pennellii HOM05D005203 ORTHO05D006383 2.0e-68 262.7 161 75.8
VMungo1309G0298 Vigna mungo HOM05D005203 ORTHO05D006383 2.0e-68 262.7 163 74.2
CsaV3_7G001910 Cucumis sativus L. HOM05D005203 ORTHO05D006383 3.5e-68 261.9 162 75.9
Eucgr.H04989 Eucalyptus grandis HOM05D005203 ORTHO05D006383 3.5e-68 261.9 161 77.0
FvH4_2g16770 Fragaria vesca HOM05D005203 ORTHO05D006383 3.5e-68 261.9 163 76.7
arahy.Tifrunner.gnm1.ann1.H6WGQ1 Arachis hypogaea HOM05D005203 ORTHO05D006383 5.9e-68 261.2 163 74.8
FAN15G3115 Fragaria x ananassa HOM05D005203 ORTHO05D006383 7.7e-68 260.8 163 76.7
PGR042G0992 Punica granatum HOM05D005203 ORTHO05D006383 1.0e-67 260.4 161 76.4
RcHm_v2.0_Chr6g0280891 Rosa chinensis HOM05D005203 ORTHO05D006383 1.0e-67 260.4 163 75.5
HanXRQChr10g0298431 Helianthus annuus HOM05D005203 ORTHO05D006383 1.3e-67 260.0 163 73.6
Carub.0007s0018 Capsella rubella HOM05D005203 ORTHO05D006383 1.7e-67 259.6 163 76.1
Sp7g37480 Schrenkiella parvula HOM05D005203 ORTHO05D006383 1.7e-67 259.6 163 75.5
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 2.3e-67 259.2 163 74.8
CAN.G1725.2 Capsicum annuum HOM05D005203 ORTHO05D006383 2.3e-67 259.2 161 75.8
Ca_15273_v3 Cicer arietinum L. HOM05D005203 ORTHO05D006383 2.9e-67 258.8 163 74.8
MELO3C013249.2 Cucumis melo HOM05D005203 ORTHO05D006383 2.9e-67 258.8 163 74.2
FAN24G3349 Fragaria x ananassa HOM05D005203 ORTHO05D006383 3.8e-67 258.5 163 76.1
Lalb_Chr08g0246871 Lupinus albus HOM05D005203 ORTHO05D006383 3.8e-67 258.5 165 73.3
THA.LOC104824732 Tarenaya hassleriana HOM05D005203 ORTHO05D006383 3.8e-67 258.5 163 74.8
Phvul.009G115600 Phaseolus vulgaris HOM05D005203 ORTHO05D006383 6.5e-67 257.7 162 74.7
Nn6g31681 Nelumbo nucifera HOM05D005203 ORTHO05D006383 1.1e-66 256.9 162 74.1
Lsat_1_v5_gn_3_48560 Lactuca sativa HOM05D005203 ORTHO05D006383 1.5e-66 256.5 163 73.0
Lsat_1_v5_gn_4_71380 Lactuca sativa HOM05D005203 ORTHO05D006383 1.5e-66 256.5 163 71.8
Actinidia20576 Actinidia chinensis HOM05D005203 ORTHO05D006383 1.9e-66 256.1 157 77.1
ECA246G3822 Erigeron canadensis HOM05D005203 ORTHO05D006383 2.5e-66 255.8 163 72.4
Sc18g0005820 Simmondsia chinensis HOM05D005203 ORTHO05D006383 2.5e-66 255.8 162 72.8
HanXRQChr15g0476431 Helianthus annuus HOM05D005203 ORTHO05D006383 3.2e-66 255.4 163 73.0
ECA234G1180 Erigeron canadensis HOM05D005203 ORTHO05D006383 4.2e-66 255.0 163 71.8
Eucgr.L00584 Eucalyptus grandis HOM05D005203 ORTHO05D006383 4.2e-66 255.0 156 76.9
PSO210G4213 Papaver somniferum HOM05D005203 ORTHO05D006383 4.2e-66 255.0 163 73.6
Aqoxy5G00999 Aquilegia oxysepala HOM05D005203 ORTHO05D006383 7.2e-66 254.2 163 76.1
BcaNung01996 Brassica carinata HOM05D005203 ORTHO05D006383 7.2e-66 254.2 166 74.1
Thhalv10025208m.g Eutrema salsugineum HOM05D005203 ORTHO05D006383 9.5e-66 253.8 163 73.0
PSO170G2598 Papaver somniferum HOM05D005203 ORTHO05D006383 1.2e-65 253.4 163 73.0
Psat5g000480 Pisum sativum HOM05D005203 ORTHO05D006383 1.2e-65 253.4 163 72.4
AT4G38240 Arabidopsis thaliana HOM05D005203 ORTHO05D006383 2.8e-65 252.3 163 73.6
ClCG02G003410 Citrullus lanatus HOM05D005203 ORTHO05D006383 3.6e-65 251.9 172 70.9
Medtr3g118520 Medicago truncatula HOM05D005203 ORTHO05D006383 4.7e-65 251.5 163 72.4
AL7G10160 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 6.1e-65 251.1 163 73.6
SGA_v2.0_scaffold399G50809 Striga asiatica HOM05D005203 ORTHO05D006383 8.0e-65 250.8 194 66.0
TPR.G38553 Trifolium pratense HOM05D005203 ORTHO05D006383 8.0e-65 250.8 163 72.4
Os02g0832800 Oryza sativa ssp. japonica HOM05D005203 ORTHO05D006383 1.5e-63 246.5 163 70.6
CARHR294030 Cardamine hirsuta HOM05D005203 ORTHO05D006383 2.6e-63 245.7 152 76.3
Zm00001eb421090 Zea mays HOM05D005203 ORTHO05D006383 3.4e-63 245.4 163 70.6
CDE07G0143 Ceratophyllum demersum HOM05D005203 ORTHO05D006383 4.4e-63 245.0 163 69.9
HPP92_022155 Vanilla planifolia HOM05D005203 ORTHO05D006383 1.3e-62 243.4 161 69.6
BNapus_Darmor_BZH_scaffold_146p00070 Brassica napus HOM05D005203 ORTHO05D006383 1.7e-62 243.0 163 71.2
BolC7t46794H Brassica oleracea HOM05D005203 ORTHO05D006383 1.7e-62 243.0 152 75.0
BraA06t27778Z Brassica rapa HOM05D005203 ORTHO05D006383 3.7e-62 241.9 152 75.0
Eucgr.L00583 Eucalyptus grandis HOM05D005203 ORTHO05D006383 4.9e-62 241.5 143 79.0
Cfa005368 Carpinus fangiana HOM05D005203 ORTHO05D006383 1.4e-61 240.0 153 76.5
Cpa.g.c28580 Carica papaya HOM05D005203 ORTHO05D006383 2.0e-60 236.1 153 73.2
Haze_02001 Corylus avellana HOM05D005203 ORTHO05D006383 3.8e-59 231.9 154 74.0
ATR0807G194 Amborella trichopoda HOM05D005203 ORTHO05D006383 6.6e-59 231.1 164 68.3
SMO201G0157 Selaginella moellendorffii HOM05D005203 ORTHO05D006383 5.6e-58 228.0 150 70.0
TAR376G0977 Trochodendron aralioides HOM05D005203 ORTHO05D006383 8.0e-57 224.2 143 73.4
COL.COLO4_19776 Corchorus olitorius HOM05D005203 ORTHO05D006383 4.0e-56 221.9 164 67.7
Aa31LG1G14200 Aethionema arabicum HOM05D005203 ORTHO05D006383 5.7e-55 218.0 146 71.2
vmacro02339 Vaccinium macrocarpon HOM05D005203 ORTHO05D006383 4.1e-53 211.8 318 41.5
Sabra04G0139200 Salix brachista HOM05D005203 ORTHO05D006383 1.2e-52 210.3 163 64.4
arahy.Tifrunner.gnm1.ann1.Z16TJ0 Arachis hypogaea HOM05D005203 ORTHO05D006383 3.0e-51 205.7 163 62.6
Pp3c12_4490 Physcomitrium patens HOM05D005203 ORTHO05D006383 9.5e-50 200.7 150 61.3
Pp3c22_17330 Physcomitrium patens HOM05D005203 ORTHO05D006383 2.0e-47 193.0 150 62.7
HPP92_004948 Vanilla planifolia HOM05D005203 ORTHO05D006383 2.6e-47 192.6 132 68.9
Mapoly0041s0049 Marchantia polymorpha HOM05D005203 ORTHO05D006383 1.6e-44 183.3 148 58.8
AagrBONN_evm.TU.Sc2ySwM_362.2915 Anthoceros agrestis HOM05D005203 ORTHO05D006383 2.7e-44 182.6 152 61.2
Hund06364 Selenicereus undatus HOM05D005203 ORTHO05D006383 7.8e-44 181.0 130 67.7
GSVIVG01002907001 Vitis vinifera HOM05D005203 ORTHO05D006383 2.5e-42 176.0 93 87.1
AUR62010173 Chenopodium quinoa HOM05D005203 ORTHO05D006383 1.2e-41 173.7 123 69.1
Sabra09G0130500 Salix brachista HOM05D005203 ORTHO05D006383 1.1e-40 170.6 163 57.7
CBR_g40811 Chara braunii HOM05D005203 ORTHO05D006383 4.0e-40 168.7 150 54.7
DCAR_026076 Daucus carota HOM05D005203 ORTHO05D006383 8.9e-40 167.5 148 58.8
EL10Ac9g21529 Beta vulgaris HOM05D005203 ORTHO05D006383 1.7e-35 153.3 135 57.0
AUR62013174 Chenopodium quinoa HOM05D005203 ORTHO05D006383 9.5e-34 147.5 160 53.8
TAR628G1330 Trochodendron aralioides HOM05D005203 ORTHO05D006383 6.8e-32 141.4 93 74.2
AL7G13060 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 1.4e-29 133.7 101 65.3
MCO10G329 Micromonas commoda HOM05D005203 ORTHO05D006383 1.4e-29 133.7 161 46.6
CANSAT78G0806 Cannabis sativa HOM05D005203 ORTHO05D006383 2.6e-23 112.8 74 73.0
MCO01G683 Micromonas commoda HOM05D005203 ORTHO05D006383 1.4e-16 90.5 156 35.9
SEGI_16108 Sequoiadendron giganteum HOM05D005203 ORTHO05D006383 4.9e-14 82.0 73 54.8
AL6G14740 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 1.4e-13 80.5 45 82.2


User provided reference genes

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