Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007679 Camellia sinensis var. sinensis HOM05D007595 ORTHO05D009570 2.2e-103 380.6 184 100.0
Actinidia05786 Actinidia chinensis HOM05D003161 ORTHO05D009570 4.7e-77 293.1 181 80.1
Rhsim05G0178700 Rhododendron simsii HOM05D007595 ORTHO05D009570 6.2e-69 266.2 183 75.4
Duzib138G0502 Durio zibethinus HOM05D007595 ORTHO05D009570 1.5e-67 261.5 184 66.8
vmacro09088 Vaccinium macrocarpon HOM05D007595 ORTHO05D009570 2.0e-67 261.2 186 73.1
Ah.08g212430 Amaranthus hybridus HOM05D007595 ORTHO05D009570 3.7e-66 256.9 184 66.8
MD02G1222500 Malus domestica HOM05D007595 ORTHO05D009570 3.2e-65 253.8 184 66.3
QL04p026468 Quercus lobata HOM05D007595 ORTHO05D009570 4.1e-65 253.4 184 66.3
Atru.chr5.81 Acer truncatum HOM05D007595 ORTHO05D009570 3.5e-64 250.4 184 63.0
RcHm_v2.0_Chr7g0215291 Rosa chinensis HOM05D007595 ORTHO05D009570 4.6e-64 250.0 184 64.7
PGSC0003DMG400001689 Solanum tuberosum HOM05D007595 ORTHO05D009570 2.3e-63 247.7 180 67.2
AUR62008574 Chenopodium quinoa HOM05D007595 ORTHO05D009570 5.1e-63 246.5 184 61.4
AUR62034666 Chenopodium quinoa HOM05D007595 ORTHO05D009570 5.1e-63 246.5 184 62.5
CsaV3_3G010510 Cucumis sativus L. HOM05D007595 ORTHO05D009570 1.9e-62 244.6 184 63.0
Prupe.1G180300 Prunus persica HOM05D007595 ORTHO05D009570 2.5e-62 244.2 184 64.1
Cfa011030 Carpinus fangiana HOM05D007595 ORTHO05D009570 3.3e-62 243.8 184 65.2
COL.COLO4_12359 Corchorus olitorius HOM05D007595 ORTHO05D009570 3.3e-62 243.8 184 63.6
ClCG05G002930 Citrullus lanatus HOM05D007595 ORTHO05D009570 7.3e-62 242.7 181 64.1
Cc02_g25530 Coffea canephora HOM05D007595 ORTHO05D009570 9.5e-62 242.3 181 64.6
MELO3C006272.2 Cucumis melo HOM05D007595 ORTHO05D009570 9.5e-62 242.3 184 62.5
TWI59G0156 Tripterygium wilfordii HOM05D007595 ORTHO05D009570 1.2e-61 241.9 184 64.7
FAN08G2497 Fragaria x ananassa HOM05D007595 ORTHO05D009570 6.2e-61 239.6 184 63.0
Potri.014G052800 Populus trichocarpa HOM05D007595 ORTHO05D009570 1.1e-60 238.8 184 62.0
CiPaw.13G022600 Carya illinoinensis HOM05D007595 ORTHO05D009570 1.8e-60 238.0 181 63.0
Manes.01G274800 Manihot esculenta HOM05D007595 ORTHO05D009570 1.8e-60 238.0 184 61.4
Gohir.A12G098700 Gossypium hirsutum HOM05D007595 ORTHO05D009570 6.8e-60 236.1 184 59.8
Peaxi162Scf00793g00032 Petunia axillaris HOM05D007595 ORTHO05D009570 8.9e-60 235.7 174 66.1
Sed0013429 Sechium edule HOM05D007595 ORTHO05D009570 8.9e-60 235.7 184 61.4
Sabra14G0039800 Salix brachista HOM05D007595 ORTHO05D009570 1.2e-59 235.3 184 60.3
FvH4_5g25080 Fragaria vesca HOM05D007595 ORTHO05D009570 3.4e-59 233.8 184 62.0
Lsat_1_v5_gn_4_38381 Lactuca sativa HOM05D007595 ORTHO05D009570 9.9e-59 232.3 184 62.5
CANSAT54G2206 Cannabis sativa HOM05D007595 ORTHO05D009570 1.7e-58 231.5 183 62.3
RcHm_v2.0_Chr4g0407101 Rosa chinensis HOM05D007595 ORTHO05D009570 3.8e-58 230.3 184 60.9
CANSAT25G1659 Cannabis sativa HOM05D007595 ORTHO05D009570 8.4e-58 229.2 184 63.0
Haze_02895 Corylus avellana HOM05D007595 ORTHO05D009570 1.1e-57 228.8 175 65.1
Sc22g0000140 Simmondsia chinensis HOM05D007595 ORTHO05D009570 1.4e-57 228.4 181 60.8
Sc22g0001280 Simmondsia chinensis HOM05D007595 ORTHO05D009570 1.4e-57 228.4 181 60.8
Dinv44032 Davidia involucrata HOM05D007595 ORTHO05D009570 1.9e-57 228.0 174 67.8
Oeu004640.1 Olea europaea HOM05D007595 ORTHO05D009570 3.2e-57 227.3 179 60.9
Sopen01g035520 Solanum pennellii HOM05D007595 ORTHO05D009570 5.4e-57 226.5 169 66.3
Ciclev10018805m.g Citrus clementina HOM05D007595 ORTHO05D009570 9.2e-57 225.7 183 59.0
Phvul.002G094300 Phaseolus vulgaris HOM05D007595 ORTHO05D009570 4.6e-56 223.4 184 57.1
CANSAT78G1456 Cannabis sativa HOM05D007595 ORTHO05D009570 6.0e-56 223.0 184 62.0
Hund27417 Selenicereus undatus HOM05D007595 ORTHO05D009570 6.0e-56 223.0 184 61.4
EL10Ac7g17423 Beta vulgaris HOM05D007595 ORTHO05D009570 6.6e-55 219.5 184 57.6
THA.LOC104811608 Tarenaya hassleriana HOM05D007595 ORTHO05D009570 1.1e-54 218.8 178 60.7
Glyma.07G218100 Glycine max HOM05D007595 ORTHO05D009570 1.5e-54 218.4 186 58.1
VMungo0251G3282 Vigna mungo HOM05D007595 ORTHO05D009570 5.6e-54 216.5 184 54.9
Lj1g0026949 Lotus japonicus HOM05D007595 ORTHO05D009570 7.3e-54 216.1 185 58.9
Lalb_Chr16g0384971 Lupinus albus HOM05D007595 ORTHO05D009570 7.3e-54 216.1 185 60.0
Psat3g072800 Pisum sativum HOM05D007595 ORTHO05D009570 2.8e-53 214.2 182 56.6
Ca_08452_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 1.1e-52 212.2 181 58.0
Ca_08455_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 1.1e-52 212.2 181 58.0
SHI13644 Sapria himalayana HOM05D007595 ORTHO05D009570 6.9e-52 209.5 181 54.7
Nitab4.5_0004273g0020 Nicotiana tabacum HOM05D007595 ORTHO05D009570 1.2e-51 208.8 187 57.2
SalBow5G3719 Salvia bowleyana HOM05D007595 ORTHO05D009570 2.0e-51 208.0 184 56.5
Lj9C550T12 Lonicera japonica HOM05D007595 ORTHO05D009570 3.8e-50 203.8 145 67.6
CAN.G756.22 Capsicum annuum HOM05D007595 ORTHO05D009570 2.4e-49 201.1 145 66.9
Medtr7g091470 Medicago truncatula HOM05D007595 ORTHO05D009570 3.5e-48 197.2 175 53.1
MSTRG.20666 Avicennia marina HOM05D007595 ORTHO05D009570 8.7e-47 192.6 181 53.6
MBI04_g20744_MAGBIO Magnolia biondii HOM05D000404 ORTHO05D001765 1.9e-46 191.4 183 53.0
Migut.B01494 Erythranthe guttata HOM05D007595 ORTHO05D009570 7.3e-46 189.5 181 51.4
SGA_v2.0_scaffold34G13580 Striga asiatica HOM05D007595 ORTHO05D009570 9.0e-44 182.6 181 50.3
Nitab4.5_0000563g0010 Nicotiana tabacum HOM05D007595 ORTHO05D009570 5.8e-43 179.9 171 56.7
CDE04G2406 Ceratophyllum demersum HOM05D007595 ORTHO05D009570 1.7e-42 178.3 183 50.3
Thecc.01G401700 Theobroma cacao HOM05D007595 ORTHO05D009570 3.8e-42 177.2 117 69.2
PSO675G4153 Papaver somniferum HOM05D007595 ORTHO05D009570 7.1e-41 172.9 190 48.4
TAR629G2414 Trochodendron aralioides HOM05D007595 ORTHO05D009570 3.5e-40 170.6 127 67.7
Aa31LG1G28920 Aethionema arabicum HOM05D007595 ORTHO05D009570 1.3e-39 168.7 140 59.3
Glyma.20G014500 Glycine max HOM05D007595 ORTHO05D009570 1.3e-39 168.7 142 54.9
Rhsim07G0038800 Rhododendron simsii HOM05D007595 ORTHO05D009570 3.9e-39 167.2 144 63.9
Lalb_Chr05g0219501 Lupinus albus HOM05D007595 ORTHO05D009570 5.1e-39 166.8 174 51.1
PSO732G0035 Papaver somniferum HOM05D007595 ORTHO05D009570 8.7e-39 166.0 190 46.3
Gohir.D12G101900 Gossypium hirsutum HOM05D007595 ORTHO05D009570 1.5e-38 165.2 117 64.1
Aqoxy7G02148 Aquilegia oxysepala HOM05D007595 ORTHO05D009570 4.0e-36 157.1 153 53.6
PSO732G0412 Papaver somniferum HOM05D007595 ORTHO05D009570 2.9e-34 151.0 171 48.0
TPR.G3705 Trifolium pratense HOM05D007595 ORTHO05D009570 1.6e-32 145.2 108 63.9
PGR042G2115 Punica granatum HOM05D007595 ORTHO05D009570 4.6e-32 143.7 119 61.3
HanXRQChr14g0457401 Helianthus annuus HOM05D007595 ORTHO05D009570 1.9e-30 138.3 118 56.8
Nn1g00708 Nelumbo nucifera HOM05D007595 ORTHO05D009570 6.2e-29 133.3 116 60.3
DCAR_029507 Daucus carota HOM05D007595 ORTHO05D009570 8.2e-29 132.9 118 55.1
RcHm_v2.0_Chr4g0407111 Rosa chinensis HOM05D007595 ORTHO05D009570 6.9e-28 129.8 91 63.7
Gorai.008G111100 Gossypium raimondii HOM05D007595 ORTHO05D009570 3.4e-27 127.5 91 61.5
ECA234G2641 Erigeron canadensis HOM05D007595 ORTHO05D009570 1.7e-26 125.2 116 52.6
GSVIVG01018339001 Vitis vinifera HOM05D007595 ORTHO05D009570 1.9e-25 121.7 90 61.1
HPP92_014879 Vanilla planifolia HOM05D007595 ORTHO05D009570 8.2e-21 106.3 184 35.9
Cc11_g12050 Coffea canephora HOM05D007595 ORTHO05D009570 1.8e-20 105.1 78 60.3
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 1.5e-14 85.5 181 32.0
CsaV3_5G029290 Cucumis sativus L. HOM05D008657 ORTHO05D010869 5.0e-10 70.5 165 27.9
THA.LOC104817005 Tarenaya hassleriana HOM05D000104 ORTHO05D009920 5.0e-10 70.5 103 34.0
MELO3C011779.2 Cucumis melo HOM05D008657 ORTHO05D010869 4.2e-09 67.4 181 25.4
Eucgr.D01185 Eucalyptus grandis HOM05D007595 ORTHO05D009570 1.2e-08 65.9 54 57.4
Lj2g0007949 Lotus japonicus HOM05D006858 ORTHO05D008767 1.8e-07 62.0 147 32.0
CSS0003153 Camellia sinensis var. sinensis HOM05D000399 ORTHO05D000304 3.9e-07 60.8 180 25.0
Dinv02560 Davidia involucrata HOM05D008657 ORTHO05D010869 3.9e-07 60.8 165 24.2
Eucgr.D00277 Eucalyptus grandis HOM05D000104 ORTHO05D009920 3.9e-07 60.8 100 32.0
ECA234G3464 Erigeron canadensis HOM05D007639 ORTHO05D009509 6.7e-07 60.1 179 26.8
Gohir.A08G137650 Gossypium hirsutum HOM05D000104 ORTHO05D008354 1.1e-06 59.3 112 30.4
Hma1.2p1_1014F.1_g247820 Hydrangea macrophylla HOM05D000104 ORTHO05D009920 1.5e-06 58.9 100 32.0
Nitab4.5_0001130g0070 Nicotiana tabacum HOM05D000104 ORTHO05D009920 1.5e-06 58.9 100 32.0
C03p00670 Brassica napus HOM05D007455 ORTHO05D009431 2.0e-06 58.5 164 28.0
BolC3t12630H Brassica oleracea HOM05D007455 ORTHO05D009431 2.0e-06 58.5 164 28.0
BcaB01g06086 Brassica carinata HOM05D007455 ORTHO05D009431 2.6e-06 58.2 164 28.0
BcaB01g06201 Brassica carinata HOM05D007455 ORTHO05D009431 2.6e-06 58.2 163 27.6
A03p00400 Brassica napus HOM05D007455 ORTHO05D009431 3.3e-06 57.8 164 27.4
Nitab4.5_0000103g0110 Nicotiana tabacum HOM05D000104 ORTHO05D009920 3.3e-06 57.8 100 32.0
Carub.0005s1609 Capsella rubella HOM05D000424 ORTHO05D000355 4.4e-06 57.4 164 28.7


User provided reference genes

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