Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007666 Camellia sinensis var. sinensis HOM05D012166 ORTHO05D015543 1.2e-203 713.0 380 100.0
CSS0031221 Camellia sinensis var. sinensis HOM05D012166 ORTHO05D015543 1.7e-107 393.7 355 60.3
CSS0009199 Camellia sinensis var. sinensis HOM05D012166 ORTHO05D015543 4.4e-84 315.8 379 50.9
CSS0007251 Camellia sinensis var. sinensis HOM05D012166 ORTHO05D015543 8.2e-83 311.6 386 50.5
CSS0026812 Camellia sinensis var. sinensis HOM05D012166 ORTHO05D015543 5.2e-69 265.8 378 46.6
CSS0037828 Camellia sinensis var. sinensis HOM05D012166 ORTHO05D015543 1.2e-68 264.6 394 43.9
CSS0014983 Camellia sinensis var. sinensis HOM05D012166 ORTHO05D015543 2.8e-67 260.0 381 44.4
CSS0033194 Camellia sinensis var. sinensis HOM05D012166 ORTHO05D015543 7.8e-65 251.9 339 48.1
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 8.1e-46 188.7 251 45.0
CSS0029449 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.6e-38 164.5 173 52.0
CSS0006373 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.1e-38 164.1 173 50.3
CSS0039855 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.8e-38 163.7 430 32.1
CSS0003101 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.6e-38 163.3 173 52.0
CSS0017003 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.6e-38 163.3 173 52.0
CSS0019890 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.6e-38 163.3 173 52.0
CSS0033949 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.6e-38 163.3 173 50.9
CSS0047776 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.6e-38 163.3 173 52.0
CSS0002884 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.1e-38 162.2 173 50.9
CSS0032716 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.0e-37 159.8 173 50.9
CSS0038181 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-36 158.3 173 49.7
CSS0021854 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.0e-36 157.5 173 50.3
CSS0044817 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.4e-36 156.8 173 48.6
CSS0045951 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.7e-35 154.5 352 35.5
CSS0008327 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.2e-35 154.1 170 51.2
CSS0000008 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.9e-35 152.9 173 48.6
CSS0022421 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.9e-35 152.9 173 48.0
CSS0036987 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.4e-35 152.1 173 49.1
CSS0012883 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.4e-34 149.4 173 48.0
CSS0033606 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-33 148.3 173 47.4
CSS0048163 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.5e-31 140.6 177 44.1
CSS0047664 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.4e-29 134.8 247 36.4
CSS0034226 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.1e-29 133.7 247 36.0
CSS0000254 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.3e-29 132.9 247 36.0
CSS0033175 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.3e-29 132.9 247 35.2
CSS0015860 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.2e-27 127.5 247 34.8
CSS0011436 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 1.9e-23 114.4 267 33.0
CSS0004810 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.0e-20 104.4 170 38.2
CSS0022567 Camellia sinensis var. sinensis HOM05D016817 ORTHO05D018818 2.9e-19 100.5 145 42.1
CSS0015456 Camellia sinensis var. sinensis HOM05D016817 ORTHO05D018818 1.1e-18 98.6 149 42.3
CSS0021996 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 1.9e-18 97.8 142 43.0
CSS0025145 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000034 2.4e-18 97.4 109 45.9
CSS0049976 Camellia sinensis var. sinensis HOM05D016817 ORTHO05D018818 4.2e-18 96.7 146 41.8
CSS0034393 Camellia sinensis var. sinensis HOM05D016817 ORTHO05D018818 5.4e-18 96.3 145 40.7
CSS0026587 Camellia sinensis var. sinensis HOM05D016817 ORTHO05D018818 7.1e-18 95.9 145 40.7
CSS0039137 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000034 1.2e-17 95.1 109 45.0
CSS0032298 Camellia sinensis var. sinensis HOM05D016817 ORTHO05D018818 2.3e-16 90.9 143 39.2
CSS0002587 Camellia sinensis var. sinensis HOM05D016817 ORTHO05D018818 1.9e-15 87.8 144 38.9
Rhsim11G0064300 Rhododendron simsii HOM05D000004 ORTHO05D000034 4.3e-15 86.7 226 28.8
CSS0045202 Camellia sinensis var. sinensis HOM05D016817 ORTHO05D018818 9.6e-15 85.5 149 38.3
QL04p087838 Quercus lobata HOM05D000004 ORTHO05D000002 9.6e-15 85.5 163 36.8
CSS0030156 Camellia sinensis var. sinensis HOM05D002151 ORTHO05D002142 1.6e-14 84.7 209 32.5
CSS0002509 Camellia sinensis var. sinensis HOM05D002151 ORTHO05D002142 2.8e-14 84.0 209 30.1
CSS0025076 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 2.8e-14 84.0 136 36.8
CSS0043796 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 5.3e-13 79.7 236 30.1
Rhsim11G0020300 Rhododendron simsii HOM05D000004 ORTHO05D000224 5.3e-13 79.7 180 33.3
Rhsim05G0131300 Rhododendron simsii HOM05D000995 ORTHO05D000638 4.5e-12 76.6 169 29.6
Rhsim01G0139800 Rhododendron simsii HOM05D012166 ORTHO05D015224 5.8e-12 76.3 96 40.6
Rhsim03G0184300 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.7e-11 74.7 157 32.5
CSS0015334 Camellia sinensis var. sinensis HOM05D012166 ORTHO05D000224 4.9e-11 73.2 102 42.2
CSS0012116 Camellia sinensis var. sinensis HOM05D010325 ORTHO05D015543 1.1e-10 72.0 67 59.7
Atru.chr9.42 Acer truncatum HOM05D000004 ORTHO05D000002 1.4e-10 71.6 188 27.7
Atru.chr6.581 Acer truncatum HOM05D000004 ORTHO05D000002 1.9e-10 71.2 182 27.5
Actinidia20107 Actinidia chinensis HOM05D018364 ORTHO05D015224 1.9e-10 71.2 96 40.6
Dinv21718 Davidia involucrata HOM05D018364 ORTHO05D015224 5.5e-10 69.7 91 41.8
CSS0004331 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.1e-10 69.3 85 42.4
CSS0049442 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D113196 9.3e-10 68.9 56 55.4
Rhsim10G0111000 Rhododendron simsii HOM05D000004 ORTHO05D000034 9.3e-10 68.9 140 30.7
Rhsim05G0059200 Rhododendron simsii HOM05D011494 ORTHO05D000034 2.7e-09 67.4 109 33.9
PGSC0003DMG400040935 Solanum tuberosum HOM05D010553 ORTHO05D000034 2.7e-09 67.4 190 28.4
Rhsim07G0097500 Rhododendron simsii HOM05D000375 ORTHO05D000224 4.6e-09 66.6 182 29.1
Rhsim07G0098600 Rhododendron simsii HOM05D000375 ORTHO05D000224 4.6e-09 66.6 195 30.3
Rhsim08G0139100 Rhododendron simsii HOM05D000004 ORTHO05D000224 6.0e-09 66.2 189 29.1
Rhsim09G0094400 Rhododendron simsii HOM05D020422 ORTHO05D030533 7.9e-09 65.9 197 25.4
CSS0045364 Camellia sinensis var. sinensis HOM05D012166 ORTHO05D000224 1.0e-08 65.5 119 38.7
QL02p050943 Quercus lobata HOM05D000004 ORTHO05D000002 1.0e-08 65.5 172 29.7
Rhsim06G0131400 Rhododendron simsii HOM05D011308 ORTHO05D000224 1.3e-08 65.1 158 29.1
Rhsim05G0110500 Rhododendron simsii HOM05D000004 ORTHO05D000002 3.0e-08 63.9 168 29.8
Rhsim11G0010200 Rhododendron simsii HOM05D000004 ORTHO05D000224 3.9e-08 63.5 88 36.4
Rhsim08G0114800 Rhododendron simsii HOM05D000004 ORTHO05D000224 8.7e-08 62.4 169 32.5
CSS0024553 Camellia sinensis var. sinensis HOM05D012166 ORTHO05D000224 1.1e-07 62.0 108 38.9
CSS0047310 Camellia sinensis var. sinensis HOM05D010325 ORTHO05D015543 1.1e-07 62.0 57 61.4
Manes.15G183710 Manihot esculenta HOM05D000004 ORTHO05D000034 1.1e-07 62.0 52 50.0
Manes.18G140597 Manihot esculenta HOM05D000004 ORTHO05D000034 1.1e-07 62.0 52 50.0
CSS0026142 Camellia sinensis var. sinensis HOM05D010325 ORTHO05D015543 1.5e-07 61.6 68 54.4
CSS0049314 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-07 61.6 151 29.8
A09p31490 Brassica napus HOM05D014383 ORTHO05D000034 1.9e-07 61.2 42 59.5
Manes.18G145815 Manihot esculenta HOM05D000004 ORTHO05D000034 1.9e-07 61.2 57 47.4
RhsimUnG0193500 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.9e-07 61.2 181 27.1
CSS0021717 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.5e-07 60.8 148 30.4
Rhsim06G0119500 Rhododendron simsii HOM05D011308 ORTHO05D000224 2.5e-07 60.8 157 27.4
Rhsim13G0139200 Rhododendron simsii HOM05D002352 ORTHO05D000224 2.5e-07 60.8 185 26.5
CSS0018938 Camellia sinensis var. sinensis HOM05D013810 ORTHO05D000224 4.3e-07 60.1 71 43.7
TWI77G0492 Tripterygium wilfordii HOM05D000004 ORTHO05D000034 4.3e-07 60.1 109 35.8
Sopen12g013830 Solanum pennellii HOM05D010553 ORTHO05D000034 5.7e-07 59.7 119 31.1
CSS0049318 Camellia sinensis var. sinensis HOM05D012166 ORTHO05D000224 7.4e-07 59.3 121 33.9
Manes.01G066666 Manihot esculenta HOM05D000004 ORTHO05D000034 7.4e-07 59.3 52 48.1
Manes.07G076922 Manihot esculenta HOM05D000004 ORTHO05D000034 7.4e-07 59.3 52 48.1
Manes.12G118805 Manihot esculenta HOM05D000004 ORTHO05D000034 7.4e-07 59.3 52 48.1
Manes.14G148397 Manihot esculenta HOM05D000004 ORTHO05D000034 7.4e-07 59.3 52 48.1
Manes.14G148419 Manihot esculenta HOM05D000004 ORTHO05D000034 7.4e-07 59.3 52 48.1
Manes.16G075950 Manihot esculenta HOM05D000004 ORTHO05D000034 7.4e-07 59.3 52 48.1
Manes.18G139308 Manihot esculenta HOM05D000004 ORTHO05D000034 7.4e-07 59.3 52 48.1
Manes.18G144913 Manihot esculenta HOM05D000004 ORTHO05D000034 7.4e-07 59.3 52 48.1
Manes.10G099101 Manihot esculenta HOM05D000004 ORTHO05D000034 9.6e-07 58.9 52 48.1
Manes.16G051801 Manihot esculenta HOM05D000004 ORTHO05D000034 1.3e-06 58.5 52 48.1
Sopen05g017390 Solanum pennellii HOM05D000004 ORTHO05D000034 1.3e-06 58.5 54 46.3
Dinv10632 Davidia involucrata HOM05D037548 ORTHO05D015224 1.6e-06 58.2 100 32.0
Manes.02G214360 Manihot esculenta HOM05D000004 ORTHO05D000034 1.6e-06 58.2 74 37.8
Sopen12g010150 Solanum pennellii HOM05D000004 ORTHO05D000034 1.6e-06 58.2 42 52.4
Oeu050961.1 Olea europaea HOM05D009054 ORTHO05D000034 2.1e-06 57.8 90 30.0
PGSC0003DMG400038338 Solanum tuberosum HOM05D000004 ORTHO05D000034 2.8e-06 57.4 54 50.0
PGSC0003DMG400043731 Solanum tuberosum HOM05D000004 ORTHO05D000034 2.8e-06 57.4 94 36.2
Sopen02g001840 Solanum pennellii HOM05D000004 ORTHO05D000034 3.7e-06 57.0 47 53.2
Sopen08g006680 Solanum pennellii HOM05D000004 ORTHO05D000002 3.7e-06 57.0 34 61.8
Sopen09g014540 Solanum pennellii HOM05D000004 ORTHO05D000034 3.7e-06 57.0 76 36.8
PGR068G0002 Punica granatum HOM05D000004 ORTHO05D000034 4.8e-06 56.6 232 24.6
Sopen06g017340 Solanum pennellii HOM05D000002 ORTHO05D000001 4.8e-06 56.6 114 33.3
Sopen11g013940 Solanum pennellii HOM05D000004 ORTHO05D000034 4.8e-06 56.6 34 61.8
PGSC0003DMG400039254 Solanum tuberosum HOM05D000004 ORTHO05D000034 4.8e-06 56.6 47 44.7
PGSC0003DMG400040814 Solanum tuberosum HOM05D000004 ORTHO05D000034 4.8e-06 56.6 51 41.2
PGSC0003DMG400043417 Solanum tuberosum HOM05D010553 ORTHO05D000034 4.8e-06 56.6 62 38.7
Manes.08G134411 Manihot esculenta HOM05D000004 ORTHO05D000034 6.2e-06 56.2 52 44.2
Sopen01g027520 Solanum pennellii HOM05D000004 ORTHO05D000002 6.2e-06 56.2 109 30.3
Sopen04g009480 Solanum pennellii HOM05D000004 ORTHO05D000034 6.2e-06 56.2 86 33.7
Sopen04g015450 Solanum pennellii HOM05D000004 ORTHO05D000034 6.2e-06 56.2 35 60.0
PGSC0003DMG400009723 Solanum tuberosum HOM05D003808 ORTHO05D008840 6.2e-06 56.2 72 40.3
Dinv01435 Davidia involucrata HOM05D029371 ORTHO05D000002 8.2e-06 55.8 175 26.9
Sopen07g013130 Solanum pennellii HOM05D000004 ORTHO05D000002 8.2e-06 55.8 52 46.2
Sopen10g010680 Solanum pennellii HOM05D000004 ORTHO05D000034 8.2e-06 55.8 108 31.5
Sopen11g015780 Solanum pennellii HOM05D000303 ORTHO05D000034 8.2e-06 55.8 83 38.6
PGSC0003DMG400041557 Solanum tuberosum HOM05D000004 ORTHO05D000034 8.2e-06 55.8 61 41.0


User provided reference genes

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