Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007636 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 3.2e-209 731.5 369 100.0
CSS0034788 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 3.2e-209 731.5 369 100.0
Actinidia04895 Actinidia chinensis HOM05D006971 ORTHO05D009076 2.5e-177 625.5 370 85.1
Rhsim08G0155400 Rhododendron simsii HOM05D006971 ORTHO05D009076 6.2e-176 620.9 372 84.7
Dinv38707 Davidia involucrata HOM05D006971 ORTHO05D009076 4.1e-172 608.2 374 82.9
CiPaw.11G044200 Carya illinoinensis HOM05D006971 ORTHO05D009076 2.7e-163 578.9 371 77.9
CANSAT80G1552 Cannabis sativa HOM05D006971 ORTHO05D009076 4.6e-163 578.2 373 76.9
Nitab4.5_0004704g0010 Nicotiana tabacum HOM05D006971 ORTHO05D009076 1.9e-161 572.8 372 77.4
Nitab4.5_0000842g0110 Nicotiana tabacum HOM05D006971 ORTHO05D009076 2.1e-160 569.3 375 76.5
QL10p016808 Quercus lobata HOM05D006971 ORTHO05D009076 4.7e-160 568.2 372 75.8
Ciclev10020174m.g Citrus clementina HOM05D006971 ORTHO05D009076 6.2e-160 567.8 373 75.9
Ca_21824_v3 Cicer arietinum L. HOM05D006971 ORTHO05D009076 1.7e-157 559.7 367 75.5
RcHm_v2.0_Chr7g0181351 Rosa chinensis HOM05D006971 ORTHO05D009076 1.9e-156 556.2 374 73.3
CsaV3_1G005470 Cucumis sativus L. HOM05D006971 ORTHO05D009076 4.2e-156 555.1 371 73.9
Lj9A463T31 Lonicera japonica HOM05D006971 ORTHO05D009076 5.4e-156 554.7 311 84.9
Lj4g0026607 Lotus japonicus HOM05D006971 ORTHO05D009076 9.3e-156 553.9 369 75.6
Lalb_Chr07g0178011 Lupinus albus HOM05D006971 ORTHO05D009076 6.0e-155 551.2 374 73.5
MELO3C001980.2 Cucumis melo HOM05D006971 ORTHO05D009076 1.0e-154 550.4 371 73.9
Solyc03g116110.3 Solanum lycopersicum HOM05D006971 ORTHO05D009076 1.3e-154 550.1 369 75.1
Manes.06G092900 Manihot esculenta HOM05D006971 ORTHO05D009076 1.7e-154 549.7 373 73.5
PGSC0003DMG400019536 Solanum tuberosum HOM05D006971 ORTHO05D009076 2.3e-154 549.3 369 75.1
Sopen03g035080 Solanum pennellii HOM05D006971 ORTHO05D009076 5.1e-154 548.1 369 74.8
Glyma.05G027100 Glycine max HOM05D006971 ORTHO05D009076 6.6e-154 547.7 369 74.5
Prupe.5G193100 Prunus persica HOM05D006971 ORTHO05D009076 1.1e-153 547.0 367 73.3
CAN.G837.13 Capsicum annuum HOM05D006971 ORTHO05D009076 9.6e-153 543.9 372 74.7
Sed0024719 Sechium edule HOM05D006971 ORTHO05D009076 2.1e-152 542.7 371 72.8
TPR.G9261 Trifolium pratense HOM05D006971 ORTHO05D009076 2.8e-152 542.3 369 74.0
Nn4g23158 Nelumbo nucifera HOM05D006971 ORTHO05D009076 4.8e-152 541.6 371 74.4
MD14G1199800 Malus domestica HOM05D006971 ORTHO05D009076 6.2e-152 541.2 374 71.4
TWI15G1038 Tripterygium wilfordii HOM05D006971 ORTHO05D009076 6.2e-152 541.2 358 75.4
VMungo1215G2247 Vigna mungo HOM05D006971 ORTHO05D009076 6.2e-152 541.2 369 73.7
Phvul.003G190500 Phaseolus vulgaris HOM05D006971 ORTHO05D009076 8.1e-152 540.8 369 73.4
Medtr0493s0030 Medicago truncatula HOM05D006971 ORTHO05D009076 1.1e-151 540.4 369 73.2
Glyma.17G099600 Glycine max HOM05D006971 ORTHO05D009076 1.8e-151 539.7 369 73.2
Cpa.g.sc111.5 Carica papaya HOM05D006971 ORTHO05D009076 3.1e-151 538.9 375 72.8
Psat4g051280 Pisum sativum HOM05D006971 ORTHO05D009076 4.0e-151 538.5 366 73.5
Oeu006511.1 Olea europaea HOM05D006971 ORTHO05D009076 6.9e-151 537.7 376 75.0
GSVIVG01008006001 Vitis vinifera HOM05D006971 ORTHO05D009076 6.9e-151 537.7 374 74.1
Thecc.03G086400 Theobroma cacao HOM05D006971 ORTHO05D009076 9.0e-151 537.3 375 72.5
FAN04G0596 Fragaria x ananassa HOM05D006971 ORTHO05D009076 7.6e-150 534.3 419 65.6
COL.COLO4_28316 Corchorus olitorius HOM05D006971 ORTHO05D009076 9.9e-150 533.9 378 72.5
FAN18G2929 Fragaria x ananassa HOM05D006971 ORTHO05D009076 1.1e-148 530.4 316 80.1
Eucgr.B00501 Eucalyptus grandis HOM05D006971 ORTHO05D009076 1.9e-148 529.6 364 72.8
FvH4_5g14981 Fragaria vesca HOM05D006971 ORTHO05D009076 3.2e-148 528.9 316 79.7
DCAR_016549 Daucus carota HOM05D006971 ORTHO05D009076 7.1e-148 527.7 365 73.2
PGR083G0834 Punica granatum HOM05D006971 ORTHO05D009076 3.0e-146 522.3 375 71.5
arahy.Tifrunner.gnm1.ann1.QE88UD Arachis hypogaea HOM05D006971 ORTHO05D009076 3.9e-146 521.9 377 70.0
arahy.Tifrunner.gnm1.ann1.NVD91E Arachis hypogaea HOM05D006971 ORTHO05D009076 9.6e-145 517.3 377 69.2
SalBow7G4263 Salvia bowleyana HOM05D006971 ORTHO05D009076 9.6e-145 517.3 381 71.7
Aqoxy3G04167 Aquilegia oxysepala HOM05D006971 ORTHO05D009076 2.1e-144 516.2 339 76.1
MSTRG.4425 Avicennia marina HOM05D006971 ORTHO05D009076 3.7e-144 515.4 380 71.3
Potri.017G115100 Populus trichocarpa HOM05D006971 ORTHO05D009076 3.7e-144 515.4 369 70.5
ECA246G1831 Erigeron canadensis HOM05D006971 ORTHO05D009076 8.1e-144 514.2 373 70.8
PSO017G5818 Papaver somniferum HOM05D006971 ORTHO05D009076 3.1e-143 512.3 373 69.7
HanXRQChr05g0158151 Helianthus annuus HOM05D006971 ORTHO05D009076 4.0e-143 511.9 372 71.2
THA.LOC104808268 Tarenaya hassleriana HOM05D006971 ORTHO05D009076 1.5e-142 510.0 370 68.4
Cc04_g16660 Coffea canephora HOM05D006971 ORTHO05D009076 2.6e-142 509.2 378 72.8
Gohir.A08G094100 Gossypium hirsutum HOM05D006971 ORTHO05D009076 1.3e-141 506.9 369 69.1
Duzib205G0087 Durio zibethinus HOM05D006971 ORTHO05D009076 3.8e-141 505.4 370 69.7
Migut.D01821 Erythranthe guttata HOM05D006971 ORTHO05D009076 4.2e-140 501.9 373 70.5
FAN13G3185 Fragaria x ananassa HOM05D006971 ORTHO05D009076 5.5e-140 501.5 307 77.2
Sabra17G0095300 Salix brachista HOM05D006971 ORTHO05D009076 5.5e-140 501.5 371 68.5
Gorai.004G112200 Gossypium raimondii HOM05D006971 ORTHO05D009076 2.7e-139 499.2 386 65.8
Aa31LG4G4870 Aethionema arabicum HOM05D006971 ORTHO05D009076 4.6e-139 498.4 366 66.1
SGA_v2.0_scaffold114G31906 Striga asiatica HOM05D006971 ORTHO05D009076 6.0e-139 498.0 379 69.4
AT1G74640 Arabidopsis thaliana HOM05D006971 ORTHO05D009076 1.8e-138 496.5 367 68.1
MBI02_g41659_MAGBIO Magnolia biondii HOM05D006971 ORTHO05D009076 2.3e-138 496.1 374 69.0
TAR629G1638 Trochodendron aralioides HOM05D006971 ORTHO05D009076 3.0e-138 495.7 287 83.6
Carub.0002s2143 Capsella rubella HOM05D006971 ORTHO05D009076 3.9e-138 495.4 367 67.0
Ah.02g113480 Amaranthus hybridus HOM05D006971 ORTHO05D009076 6.7e-138 494.6 372 69.1
AUR62008412 Chenopodium quinoa HOM05D006971 ORTHO05D009076 8.7e-138 494.2 373 68.1
AL2G34520 Arabidopsis lyrata HOM05D006971 ORTHO05D009076 1.9e-137 493.0 367 67.8
CARHR067910 Cardamine hirsuta HOM05D006971 ORTHO05D009076 2.5e-137 492.7 311 75.2
Peaxi162Scf00274g00071 Petunia axillaris HOM05D006971 ORTHO05D009076 3.3e-137 492.3 299 81.6
Sp5g29760 Schrenkiella parvula HOM05D006971 ORTHO05D009076 1.3e-136 490.3 373 67.0
Zm00001eb099580 Zea mays HOM05D006971 ORTHO05D009076 8.2e-136 487.6 311 75.2
BcaB05g24862 Brassica carinata HOM05D006971 ORTHO05D009076 2.0e-134 483.0 366 66.9
Lsat_1_v5_gn_5_20140 Lactuca sativa HOM05D006971 ORTHO05D009076 2.6e-134 482.6 360 69.7
BraA02t06985Z Brassica rapa HOM05D006971 ORTHO05D009076 4.5e-134 481.9 369 65.6
A02p19460 Brassica napus HOM05D006971 ORTHO05D009076 7.6e-134 481.1 368 66.0
C02p31990 Brassica napus HOM05D006971 ORTHO05D009076 1.0e-133 480.7 367 65.9
BcaC03g15516 Brassica carinata HOM05D006971 ORTHO05D009076 1.3e-133 480.3 367 65.9
FAN08G1158 Fragaria x ananassa HOM05D006971 ORTHO05D009076 2.9e-133 479.2 282 80.9
ATR0564G273 Amborella trichopoda HOM05D006971 ORTHO05D009076 1.0e-130 470.7 374 63.1
PSO478G0283 Papaver somniferum HOM05D006971 ORTHO05D009076 3.0e-130 469.2 280 80.0
CDE07G1445 Ceratophyllum demersum HOM05D006971 ORTHO05D009076 4.3e-129 465.3 368 62.0
AUR62021684 Chenopodium quinoa HOM05D006971 ORTHO05D009076 1.0e-125 454.1 373 64.9
unitig_60.g25418 Utricularia gibba HOM05D006971 ORTHO05D009076 1.3e-125 453.8 310 70.3
EL10Ac5g11009 Beta vulgaris HOM05D006971 ORTHO05D009076 9.7e-121 437.6 469 53.3
Cfa018946 Carpinus fangiana HOM05D006971 ORTHO05D009076 9.7e-113 411.0 249 79.9
Hund02652 Selenicereus undatus HOM05D006971 ORTHO05D009076 2.7e-107 392.9 346 59.8
HPP92_002355 Vanilla planifolia HOM05D006971 ORTHO05D009076 4.8e-104 382.1 270 69.3
vmacro17544 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 1.6e-102 377.1 206 91.3
Gohir.D08G105301 Gossypium hirsutum HOM05D006971 ORTHO05D009076 1.0e-101 374.4 236 78.0
Mapoly0071s0120 Marchantia polymorpha HOM05D006971 ORTHO05D009076 4.7e-99 365.5 369 53.1
Mapoly0229s0006 Marchantia polymorpha HOM05D006971 ORTHO05D009076 4.7e-99 365.5 369 53.1
Pp3c23_920 Physcomitrium patens HOM05D006971 ORTHO05D009076 1.8e-98 363.6 315 56.2
Os09g0413700 Oryza sativa ssp. japonica HOM05D006971 ORTHO05D009076 1.8e-95 353.6 234 71.8
SMO111G0229 Selaginella moellendorffii HOM05D006971 ORTHO05D009076 6.5e-93 345.1 275 60.4
HPP92_002356 Vanilla planifolia HOM05D006971 ORTHO05D009076 9.4e-92 341.3 270 63.7
HPP92_027581 Vanilla planifolia HOM05D006971 ORTHO05D009076 7.1e-63 245.4 166 69.3
vmacro17545 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 8.1e-59 231.9 162 73.5
ClCG04G012280 Citrullus lanatus HOM05D006971 ORTHO05D009076 2.1e-51 207.2 166 61.4
Dinv19957 Davidia involucrata HOM05D006971 ORTHO05D009076 3.9e-45 186.4 125 77.6
AagrBONN_evm.TU.Sc2ySwM_368.527 Anthoceros agrestis HOM05D006971 ORTHO05D009076 9.6e-44 181.8 187 47.6
Thhalv10019619m.g Eutrema salsugineum HOM05D006971 ORTHO05D009076 1.5e-33 147.9 124 61.3
BcaB03g13848 Brassica carinata HOM05D006971 ORTHO05D009076 9.3e-31 138.7 147 52.4
Actinidia37630 Actinidia chinensis HOM05D000001 ORTHO05D008780 5.1e-29 132.9 84 79.8
SEGI_28088 Sequoiadendron giganteum HOM05D006971 ORTHO05D009076 5.6e-28 129.4 106 52.8
MD06G1192800 Malus domestica HOM05D006971 ORTHO05D009076 1.4e-18 98.2 84 60.7
HPP92_027582 Vanilla planifolia HOM05D006971 ORTHO05D009076 5.3e-18 96.3 132 43.2
A07p29310 Brassica napus HOM05D006971 ORTHO05D041645 5.5e-07 59.7 48 62.5
BraA07t30570Z Brassica rapa HOM05D006971 ORTHO05D041645 5.5e-07 59.7 48 62.5


User provided reference genes

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