Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007615 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 2.4e-40 168.3 81 100.0
CSS0001716 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 3.5e-23 111.3 56 91.1
CSS0040178 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 4.6e-23 110.9 56 91.1
CSS0043784 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 5.0e-22 107.5 53 96.2
Duzib151G0181 Durio zibethinus HOM05D003336 ORTHO05D003807 8.6e-22 106.7 53 94.3
Gohir.A02G012500 Gossypium hirsutum HOM05D003336 ORTHO05D003807 8.6e-22 106.7 53 94.3
Gohir.D02G013300 Gossypium hirsutum HOM05D003336 ORTHO05D003807 8.6e-22 106.7 53 94.3
Gorai.005G016800 Gossypium raimondii HOM05D003336 ORTHO05D003807 8.6e-22 106.7 53 94.3
Thecc.04G177600 Theobroma cacao HOM05D003336 ORTHO05D003807 8.6e-22 106.7 53 94.3
Lsat_1_v5_gn_3_6100 Lactuca sativa HOM05D003336 ORTHO05D003807 1.9e-21 105.5 53 92.5
Rhsim09G0026500 Rhododendron simsii HOM05D003336 ORTHO05D003807 2.5e-21 105.1 53 92.5
RhsimUnG0196100 Rhododendron simsii HOM05D003336 ORTHO05D003807 2.5e-21 105.1 53 92.5
EL10Ac3g06008 Beta vulgaris HOM05D003336 ORTHO05D003807 3.3e-21 104.8 54 88.9
SGA_v2.0_scaffold1G00608 Striga asiatica HOM05D003336 ORTHO05D003807 3.3e-21 104.8 53 92.5
THA.LOC104806347 Tarenaya hassleriana HOM05D003336 ORTHO05D003807 3.3e-21 104.8 53 92.5
CSS0038565 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 4.3e-21 104.4 52 96.2
Glyma.19G252200 Glycine max HOM05D003336 ORTHO05D003807 4.3e-21 104.4 53 92.5
Manes.04G043500 Manihot esculenta HOM05D003336 ORTHO05D003807 4.3e-21 104.4 53 90.6
Phvul.006G109300 Phaseolus vulgaris HOM05D003336 ORTHO05D003807 5.6e-21 104.0 53 92.5
PGR083G1911 Punica granatum HOM05D003336 ORTHO05D003807 5.6e-21 104.0 53 90.6
QL10p049056 Quercus lobata HOM05D003336 ORTHO05D003807 5.6e-21 104.0 53 92.5
Atru.chr6.1044 Acer truncatum HOM05D003336 ORTHO05D003807 7.3e-21 103.6 53 92.5
Atru.chr6.1778 Acer truncatum HOM05D003336 ORTHO05D003807 7.3e-21 103.6 53 92.5
BcaNung01042 Brassica carinata HOM05D003336 ORTHO05D003807 7.3e-21 103.6 53 90.6
CANSAT78G0594 Cannabis sativa HOM05D003336 ORTHO05D003807 7.3e-21 103.6 53 90.6
Migut.N03104 Erythranthe guttata HOM05D003336 ORTHO05D003807 7.3e-21 103.6 53 90.6
Migut.O00911 Erythranthe guttata HOM05D003336 ORTHO05D003807 7.3e-21 103.6 53 90.6
Eucgr.A00092 Eucalyptus grandis HOM05D003336 ORTHO05D003807 7.3e-21 103.6 53 90.6
arahy.Tifrunner.gnm1.ann1.4MR6LE Arachis hypogaea HOM05D003336 ORTHO05D003807 9.5e-21 103.2 53 90.6
arahy.Tifrunner.gnm1.ann1.HN7X2L Arachis hypogaea HOM05D003336 ORTHO05D003807 9.5e-21 103.2 53 90.6
Ciclev10001634m.g Citrus clementina HOM05D003336 ORTHO05D003807 9.5e-21 103.2 53 90.6
Medtr1g090817 Medicago truncatula HOM05D003336 ORTHO05D003807 9.5e-21 103.2 53 90.6
Psat6g173800 Pisum sativum HOM05D003336 ORTHO05D003807 9.5e-21 103.2 53 90.6
Sc25g0002520 Simmondsia chinensis HOM05D003336 ORTHO05D003807 9.5e-21 103.2 53 90.6
TPR.G37811 Trifolium pratense HOM05D003336 ORTHO05D003807 9.5e-21 103.2 53 90.6
arahy.Tifrunner.gnm1.ann1.UX0YUZ Arachis hypogaea HOM05D003336 ORTHO05D003807 1.2e-20 102.8 52 92.3
DCAR_026317 Daucus carota HOM05D003336 ORTHO05D003807 1.2e-20 102.8 58 82.8
Eucgr.H01866 Eucalyptus grandis HOM05D003336 ORTHO05D003807 1.2e-20 102.8 53 90.6
Glyma.17G108000 Glycine max HOM05D003336 ORTHO05D003807 1.2e-20 102.8 53 90.6
Lj1g0015608 Lotus japonicus HOM05D003336 ORTHO05D003807 1.2e-20 102.8 53 90.6
QL07p004835 Quercus lobata HOM05D003336 ORTHO05D003807 1.6e-20 102.4 53 90.6
HPP92_018106 Vanilla planifolia HOM05D003336 ORTHO05D003807 1.6e-20 102.4 53 88.7
VMungo0540G1651 Vigna mungo HOM05D003336 ORTHO05D003807 1.6e-20 102.4 53 90.6
Aa31LG6G4680 Aethionema arabicum HOM05D003336 ORTHO05D003807 2.1e-20 102.1 53 88.7
Os05g0194600 Oryza sativa ssp. japonica HOM05D003336 ORTHO05D003807 2.1e-20 102.1 53 90.6
Potri.017G029200 Populus trichocarpa HOM05D003336 ORTHO05D003807 2.1e-20 102.1 53 88.7
AL7G30880 Arabidopsis lyrata HOM05D003336 ORTHO05D003807 2.8e-20 101.7 53 88.7
AT4G22720 Arabidopsis thaliana HOM05D003336 ORTHO05D003807 2.8e-20 101.7 53 88.7
arahy.Tifrunner.gnm1.ann1.H7WPER Arachis hypogaea HOM05D003336 ORTHO05D003807 2.8e-20 101.7 69 72.5
MSTRG.9761 Avicennia marina HOM05D003336 ORTHO05D003807 2.8e-20 101.7 53 88.7
Carub.0007s1861 Capsella rubella HOM05D003336 ORTHO05D003807 2.8e-20 101.7 53 88.7
CARHR229640 Cardamine hirsuta HOM05D003336 ORTHO05D003807 2.8e-20 101.7 53 88.7
Cpa.g.sc9.295 Carica papaya HOM05D003336 ORTHO05D003807 2.8e-20 101.7 53 92.5
AUR62011428 Chenopodium quinoa HOM05D003336 ORTHO05D003807 2.8e-20 101.7 53 88.7
AUR62030962 Chenopodium quinoa HOM05D003336 ORTHO05D003807 2.8e-20 101.7 53 88.7
Eucgr.A00283 Eucalyptus grandis HOM05D003336 ORTHO05D003807 2.8e-20 101.7 53 88.7
Thhalv10025586m.g Eutrema salsugineum HOM05D003336 ORTHO05D003807 2.8e-20 101.7 53 88.7
Hma1.2p1_0886F.1_g232710 Hydrangea macrophylla HOM05D003336 ORTHO05D003807 2.8e-20 101.7 53 88.7
CiPaw.02G054300 Carya illinoinensis HOM05D003336 ORTHO05D003807 3.6e-20 101.3 53 90.6
HanXRQChr17g0533451 Helianthus annuus HOM05D003336 ORTHO05D003807 3.6e-20 101.3 53 86.8
Lalb_Chr18g0044261 Lupinus albus HOM05D003336 ORTHO05D003807 3.6e-20 101.3 53 90.6
MBI01_g10302_MAGBIO Magnolia biondii HOM05D003336 ORTHO05D003807 3.6e-20 101.3 52 90.4
SHI23517 Sapria himalayana HOM05D003336 ORTHO05D003807 3.6e-20 101.3 54 87.0
Sed0018746 Sechium edule HOM05D003336 ORTHO05D003807 3.6e-20 101.3 53 88.7
CSS0012442 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 4.7e-20 100.9 53 88.7
FAN10G0305 Fragaria x ananassa HOM05D003336 ORTHO05D003807 6.2e-20 100.5 53 88.7
FAN10G0412 Fragaria x ananassa HOM05D003336 ORTHO05D003807 6.2e-20 100.5 53 88.7
PGSC0003DMG400010450 Solanum tuberosum HOM05D003336 ORTHO05D003807 6.2e-20 100.5 53 86.8
TWI34G1872 Tripterygium wilfordii HOM05D003336 ORTHO05D003807 6.2e-20 100.5 53 86.8
ATR0796G111 Amborella trichopoda HOM05D003336 ORTHO05D003807 8.0e-20 100.1 53 86.8
ECA246G0584 Erigeron canadensis HOM05D003336 ORTHO05D003807 8.0e-20 100.1 53 86.8
Solyc02g068750.1 Solanum lycopersicum HOM05D003336 ORTHO05D003807 8.0e-20 100.1 53 84.9
A01p13940 Brassica napus HOM05D003336 ORTHO05D003807 1.1e-19 99.8 53 86.8
BraA01t01340Z Brassica rapa HOM05D003336 ORTHO05D003807 1.1e-19 99.8 53 86.8
AUR62008210 Chenopodium quinoa HOM05D003336 ORTHO05D003807 1.1e-19 99.8 53 86.8
CAN.G149.29 Capsicum annuum HOM05D003336 ORTHO05D003807 1.8e-19 99.0 53 84.9
FvH4_3g16550 Fragaria vesca HOM05D003336 ORTHO05D003807 1.8e-19 99.0 53 86.8
FAN11G0541 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.8e-19 99.0 53 86.8
FAN16G2332 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.8e-19 99.0 53 86.8
FAN25G0065 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.8e-19 99.0 53 86.8
MD17G1219400 Malus domestica HOM05D003336 ORTHO05D003807 1.8e-19 99.0 51 90.2
RcHm_v2.0_Chr1g0331181 Rosa chinensis HOM05D003336 ORTHO05D003807 1.8e-19 99.0 53 86.8
Zm00001eb283430 Zea mays HOM05D003336 ORTHO05D003807 1.8e-19 99.0 53 86.8
Ah.11g051610 Amaranthus hybridus HOM05D003336 ORTHO05D003807 2.3e-19 98.6 53 84.9
FAN03G2504 Fragaria x ananassa HOM05D003336 ORTHO05D003807 2.3e-19 98.6 53 84.9
Sopen02g017920 Solanum pennellii HOM05D003336 ORTHO05D003807 2.3e-19 98.6 53 84.9
Atru.chr6.1080 Acer truncatum HOM05D003336 ORTHO05D003807 4.0e-19 97.8 53 88.7
Aqoxy2G03656 Aquilegia oxysepala HOM05D003336 ORTHO05D003807 4.0e-19 97.8 53 84.9
CSS0016383 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 4.0e-19 97.8 47 97.9
AUR62003310 Chenopodium quinoa HOM05D003336 ORTHO05D003807 4.0e-19 97.8 53 86.8
MELO3C013276.2 Cucumis melo HOM05D003336 ORTHO05D003807 4.0e-19 97.8 53 84.9
MELO3C021601.2 Cucumis melo HOM05D003336 ORTHO05D003807 4.0e-19 97.8 53 84.9
CsaV3_5G026930 Cucumis sativus L. HOM05D003336 ORTHO05D003807 4.0e-19 97.8 53 84.9
Nn1g09612 Nelumbo nucifera HOM05D003336 ORTHO05D003807 4.0e-19 97.8 53 84.9
Prupe.1G196300 Prunus persica HOM05D003336 ORTHO05D003807 4.0e-19 97.8 53 84.9
BcaC09g51096 Brassica carinata HOM05D003336 ORTHO05D003807 5.2e-19 97.4 53 84.9
C01p16980 Brassica napus HOM05D003336 ORTHO05D003807 5.2e-19 97.4 53 84.9
BolC1t01638H Brassica oleracea HOM05D003336 ORTHO05D003807 5.2e-19 97.4 53 84.9
ClCG10G008650 Citrullus lanatus HOM05D003336 ORTHO05D003807 5.2e-19 97.4 53 84.9
Oeu061601.1 Olea europaea HOM05D003336 ORTHO05D003807 6.8e-19 97.1 53 86.8
Zm00001eb442100 Zea mays HOM05D003336 ORTHO05D003807 6.8e-19 97.1 52 86.5
PSO210G2800 Papaver somniferum HOM05D003336 ORTHO05D003807 8.9e-19 96.7 53 83.0
Zm00001eb007550 Zea mays HOM05D003336 ORTHO05D003807 2.0e-18 95.5 53 83.0
Zm00001eb059340 Zea mays HOM05D003336 ORTHO05D003807 3.4e-18 94.7 52 84.6
Zm00001eb121330 Zea mays HOM05D003336 ORTHO05D003807 3.4e-18 94.7 52 84.6
Zm00001eb398700 Zea mays HOM05D003336 ORTHO05D003807 9.8e-18 93.2 52 82.7
TAR365G0105 Trochodendron aralioides HOM05D003336 ORTHO05D003807 1.3e-17 92.8 53 79.2
Ciclev10002827m.g Citrus clementina HOM05D003336 ORTHO05D003807 2.2e-17 92.0 52 82.7
FAN06G1925 Fragaria x ananassa HOM05D003336 ORTHO05D003807 2.9e-17 91.7 81 60.5
A08p15940 Brassica napus HOM05D003336 ORTHO05D003807 4.9e-17 90.9 52 80.8
FAN21G2317 Fragaria x ananassa HOM05D003336 ORTHO05D003807 4.9e-17 90.9 53 81.1
SEGI_08325 Sequoiadendron giganteum HOM05D003336 ORTHO05D003807 4.9e-17 90.9 53 77.4
SMO196G0197 Selaginella moellendorffii HOM05D003336 ORTHO05D003807 5.4e-16 87.4 53 75.5
CSS0025461 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 2.0e-15 85.5 48 83.3
Mapoly0054s0003 Marchantia polymorpha HOM05D003336 ORTHO05D003807 1.0e-14 83.2 53 69.8
Pp3c8_19600 Physcomitrium patens HOM05D003336 ORTHO05D003807 8.6e-14 80.1 53 67.9
CBR_g36984 Chara braunii HOM05D003336 ORTHO05D003807 3.3e-13 78.2 53 67.9
RcHm_v2.0_Chr1g0329821 Rosa chinensis HOM05D003336 ORTHO05D003807 6.2e-12 73.9 41 82.9
MCO05G700 Micromonas commoda HOM05D003336 ORTHO05D003807 1.4e-11 72.8 53 60.4
PRCOL_00003655 Prasinoderma coloniale HOM05D003336 ORTHO05D003807 2.3e-11 72.0 53 62.3
GSVIVG01006062001 Vitis vinifera HOM05D003336 ORTHO05D003807 5.2e-11 70.9 35 91.4
Cc04_g08950 Coffea canephora HOM05D003336 ORTHO05D003807 1.2e-10 69.7 35 88.6
FvH4_7g04970 Fragaria vesca HOM05D003336 ORTHO05D003807 1.5e-10 69.3 39 84.6
Eucgr.L00050 Eucalyptus grandis HOM05D003336 ORTHO05D003807 2.0e-10 68.9 35 88.6
Duzib175G0004 Durio zibethinus HOM05D003336 ORTHO05D003807 5.8e-10 67.4 34 94.1
C01p17110 Brassica napus HOM05D003336 ORTHO05D003807 1.3e-09 66.2 57 61.4
Zm00001eb016890 Zea mays HOM05D003336 ORTHO05D003807 1.3e-09 66.2 35 85.7
Zm00001eb191860 Zea mays HOM05D003336 ORTHO05D003807 1.3e-09 66.2 35 85.7
Zm00001eb324020 Zea mays HOM05D003336 ORTHO05D003807 1.3e-09 66.2 35 85.7
Zm00001eb336440 Zea mays HOM05D003336 ORTHO05D003807 1.3e-09 66.2 35 85.7
Zm00001eb376450 Zea mays HOM05D003336 ORTHO05D003807 1.3e-09 66.2 35 85.7
CSS0000567 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 4.6e-07 57.8 31 87.1
Cfa023393 Carpinus fangiana HOM05D003336 ORTHO05D003807 3.9e-06 54.7 68 44.1


User provided reference genes

Program Settings