Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 1.4e-160 569.7 325 100.0
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 2.2e-137 492.7 325 87.4
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 1.5e-93 347.1 305 66.6
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 1.1e-91 340.9 317 65.0
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 4.1e-91 339.0 246 75.6
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 9.2e-91 337.8 298 65.1
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 1.3e-89 334.0 299 66.2
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 1.1e-88 330.9 194 88.1
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 3.3e-88 329.3 202 85.1
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 5.6e-88 328.6 202 84.2
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 6.2e-87 325.1 196 85.7
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 1.4e-86 323.9 202 83.2
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 2.3e-86 323.2 249 71.5
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 5.2e-86 322.0 196 86.2
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 6.8e-86 321.6 192 87.0
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 8.9e-86 321.2 201 83.1
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 8.9e-86 321.2 202 83.2
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 8.9e-86 321.2 202 83.2
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 1.2e-85 320.9 202 83.2
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 1.5e-85 320.5 202 82.7
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 2.0e-85 320.1 202 82.7
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 3.4e-85 319.3 192 85.4
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 4.4e-85 318.9 202 82.7
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 7.5e-85 318.2 202 82.7
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 1.1e-83 314.3 201 81.1
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 1.1e-83 314.3 190 85.8
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 1.4e-83 313.9 251 69.3
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 1.4e-83 313.9 202 81.2
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 1.9e-83 313.5 202 82.2
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 1.9e-83 313.5 195 83.6
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 2.4e-83 313.2 195 83.6
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 2.4e-83 313.2 202 82.2
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 3.2e-83 312.8 194 82.5
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 5.4e-83 312.0 202 82.2
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 7.1e-83 311.6 195 83.1
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 7.1e-83 311.6 226 72.6
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 7.1e-83 311.6 226 72.6
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 9.2e-83 311.2 202 81.7
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 9.2e-83 311.2 190 84.7
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 9.2e-83 311.2 195 83.1
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 9.2e-83 311.2 200 80.0
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 1.2e-82 310.8 204 79.9
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 1.2e-82 310.8 241 69.3
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 1.2e-82 310.8 202 80.2
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 2.1e-82 310.1 191 84.3
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 2.1e-82 310.1 250 69.2
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 2.1e-82 310.1 202 81.2
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 2.7e-82 309.7 200 82.0
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 2.7e-82 309.7 195 82.6
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 2.7e-82 309.7 196 83.2
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 3.5e-82 309.3 204 81.9
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 6.0e-82 308.5 202 81.7
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 6.0e-82 308.5 202 79.7
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 1.0e-81 307.8 198 80.3
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 1.3e-81 307.4 197 80.7
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 2.3e-81 306.6 202 81.2
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 3.0e-81 306.2 197 79.7
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 6.6e-81 305.1 203 79.3
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 8.6e-81 304.7 192 82.8
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 8.6e-81 304.7 196 83.2
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 1.1e-80 304.3 197 80.2
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 1.5e-80 303.9 194 80.9
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 1.9e-80 303.5 188 82.4
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 2.5e-80 303.1 202 80.2
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 4.3e-80 302.4 195 80.5
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 5.6e-80 302.0 190 81.1
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 5.6e-80 302.0 194 79.4
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 7.3e-80 301.6 202 77.2
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 1.6e-79 300.4 196 82.7
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 4.7e-79 298.9 204 78.9
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 4.7e-79 298.9 189 79.9
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 6.2e-79 298.5 202 77.7
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 1.1e-78 297.7 194 77.8
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 1.8e-78 297.0 200 80.0
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 3.1e-78 296.2 194 77.8
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 4.0e-78 295.8 200 78.5
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 8.9e-78 294.7 194 79.9
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 8.9e-78 294.7 194 80.9
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 8.9e-78 294.7 203 76.8
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 8.9e-78 294.7 203 76.8
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 2.0e-77 293.5 203 77.3
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 2.6e-77 293.1 210 74.3
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 5.8e-77 292.0 210 74.8
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 7.6e-77 291.6 196 77.6
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 7.6e-77 291.6 196 77.6
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 7.6e-77 291.6 203 76.4
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 1.3e-76 290.8 202 76.2
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 1.7e-76 290.4 201 76.6
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 2.2e-76 290.0 201 76.1
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 1.4e-75 287.3 194 76.8
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 1.4e-75 287.3 195 77.9
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 2.4e-75 286.6 201 75.6
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 4.1e-75 285.8 201 75.1
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 4.1e-75 285.8 194 76.3
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 7.1e-75 285.0 201 74.6
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 9.2e-75 284.6 191 77.0
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 1.2e-74 284.3 199 74.9
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 4.6e-74 282.3 190 77.4
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 1.7e-73 280.4 197 75.1
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 7.6e-69 265.0 202 71.8
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 2.7e-66 256.5 204 63.7
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 7.8e-66 255.0 202 68.8
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 4.3e-64 249.2 194 63.4
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 1.2e-61 241.1 230 57.8
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 3.8e-60 236.1 161 77.0
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 8.7e-57 224.9 204 57.8
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 3.4e-53 213.0 132 84.8
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 1.1e-51 208.0 131 80.9
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 2.1e-50 203.8 194 61.3
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 7.4e-48 195.3 128 78.9
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 1.1e-46 191.4 205 50.2
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 8.4e-44 181.8 111 81.1
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 5.5e-43 179.1 188 51.6
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 1.6e-42 177.6 183 57.9
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 9.6e-40 168.3 111 71.2
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 2.8e-39 166.8 134 65.7
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 3.2e-35 153.3 191 46.6
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 2.3e-25 120.6 79 81.0
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 5.9e-21 105.9 76 68.4
MD04G1090800 Malus domestica HOM05D006396 ORTHO05D008172 1.6e-13 81.3 49 77.6
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 2.6e-13 80.5 95 52.6
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 5.9e-13 79.3 73 61.6
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 2.2e-07 60.8 38 73.7
Psat7g159680 Pisum sativum HOM05D006396 ORTHO05D008172 4.8e-07 59.7 43 65.1
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 1.4e-06 58.2 113 38.1


User provided reference genes

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