Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007595 Camellia sinensis var. sinensis HOM05D004327 ORTHO05D005032 5.4e-199 697.6 387 100.0
Dinv42719 Davidia involucrata HOM05D004327 ORTHO05D005032 1.4e-186 656.4 387 90.7
Hma1.2p1_1025F.1_g249340 Hydrangea macrophylla HOM05D004327 ORTHO05D005032 4.5e-185 651.4 384 91.7
Dinv43382 Davidia involucrata HOM05D004327 ORTHO05D005032 2.9e-176 622.1 365 91.0
Prupe.1G085300 Prunus persica HOM05D004327 ORTHO05D005032 2.9e-176 622.1 386 86.0
GSVIVG01029211001 Vitis vinifera HOM05D004327 ORTHO05D005032 1.9e-175 619.4 384 89.8
CANSAT11G1121 Cannabis sativa HOM05D004327 ORTHO05D005032 3.6e-174 615.1 386 84.5
Thecc.09G176900 Theobroma cacao HOM05D004327 ORTHO05D005032 1.0e-173 613.6 387 88.4
TAR343G0001 Trochodendron aralioides HOM05D004327 ORTHO05D005032 1.0e-173 613.6 387 84.8
Nn8g40460 Nelumbo nucifera HOM05D004327 ORTHO05D005032 3.0e-173 612.1 387 86.6
Manes.14G154300 Manihot esculenta HOM05D004327 ORTHO05D005032 6.7e-173 610.9 387 86.6
QL02p097831 Quercus lobata HOM05D004327 ORTHO05D005032 6.7e-173 610.9 384 88.3
Potri.018G092000 Populus trichocarpa HOM05D004327 ORTHO05D005032 1.9e-172 609.4 386 88.6
ClCG11G012140 Citrullus lanatus HOM05D004327 ORTHO05D005032 9.7e-172 607.1 384 83.9
MD13G1253000 Malus domestica HOM05D004327 ORTHO05D005032 9.1e-170 600.5 387 83.7
Atru.chr7.613 Acer truncatum HOM05D004327 ORTHO05D005032 1.2e-169 600.1 386 85.8
vmacro06012 Vaccinium macrocarpon HOM05D004327 ORTHO05D005032 1.2e-169 600.1 494 69.6
CsaV3_2G008420 Cucumis sativus L. HOM05D004327 ORTHO05D005032 2.6e-169 599.0 386 82.6
Sed0007507 Sechium edule HOM05D004327 ORTHO05D005032 2.6e-169 599.0 386 82.4
VMungo1215G1888 Vigna mungo HOM05D004327 ORTHO05D005032 2.6e-169 599.0 386 84.7
HanXRQChr11g0322421 Helianthus annuus HOM05D004327 ORTHO05D005032 5.9e-169 597.8 388 86.6
Cpa.g.sc233.7 Carica papaya HOM05D004327 ORTHO05D005032 1.3e-168 596.7 368 88.3
CiPaw.07G192500 Carya illinoinensis HOM05D004327 ORTHO05D005032 1.3e-168 596.7 387 84.0
Cc06_g13210 Coffea canephora HOM05D004327 ORTHO05D005032 1.7e-168 596.3 383 86.7
Duzib150G0132 Durio zibethinus HOM05D004327 ORTHO05D005032 2.9e-168 595.5 387 86.3
MSTRG.26218 Avicennia marina HOM05D004327 ORTHO05D005032 8.5e-168 594.0 382 83.2
Gohir.D08G093800 Gossypium hirsutum HOM05D004327 ORTHO05D005032 8.5e-168 594.0 387 86.6
Actinidia17317 Actinidia chinensis HOM05D004327 ORTHO05D005032 1.9e-167 592.8 385 87.8
Gohir.A08G084200 Gossypium hirsutum HOM05D004327 ORTHO05D005032 2.5e-167 592.4 387 86.3
Ciclev10008675m.g Citrus clementina HOM05D004327 ORTHO05D005032 4.2e-167 591.7 384 86.5
Glyma.17G062900 Glycine max HOM05D004327 ORTHO05D005032 4.2e-167 591.7 386 83.7
MD16G1257500 Malus domestica HOM05D004327 ORTHO05D005032 5.5e-167 591.3 386 83.2
COL.COLO4_37716 Corchorus olitorius HOM05D004327 ORTHO05D005032 9.4e-167 590.5 383 86.9
Lj4g0017259 Lotus japonicus HOM05D004327 ORTHO05D005032 2.7e-166 589.0 381 85.0
RcHm_v2.0_Chr4g0402371 Rosa chinensis HOM05D004327 ORTHO05D005032 6.1e-166 587.8 387 83.7
DCAR_017971 Daucus carota HOM05D004327 ORTHO05D005032 1.4e-165 586.6 365 85.8
Lalb_Chr07g0180501 Lupinus albus HOM05D004327 ORTHO05D005032 1.4e-165 586.6 383 83.3
Gorai.004G099500 Gossypium raimondii HOM05D004327 ORTHO05D005032 3.0e-165 585.5 395 84.1
arahy.Tifrunner.gnm1.ann1.UF0NDT Arachis hypogaea HOM05D004327 ORTHO05D005032 5.1e-165 584.7 385 84.4
Duzib168G0099 Durio zibethinus HOM05D004327 ORTHO05D005032 5.1e-165 584.7 389 84.6
Rhsim03G0264600 Rhododendron simsii HOM05D004327 ORTHO05D005032 8.8e-165 583.9 366 88.5
Phvul.003G145300 Phaseolus vulgaris HOM05D004327 ORTHO05D005032 1.1e-164 583.6 386 82.4
Glyma.13G096600 Glycine max HOM05D004327 ORTHO05D005032 1.5e-164 583.2 366 86.1
PSO063G6085 Papaver somniferum HOM05D004327 ORTHO05D005032 2.0e-164 582.8 390 82.8
arahy.Tifrunner.gnm1.ann1.IHC8NS Arachis hypogaea HOM05D004327 ORTHO05D005032 3.3e-164 582.0 385 84.2
Solyc07g019530.3 Solanum lycopersicum HOM05D004327 ORTHO05D005032 3.3e-164 582.0 389 84.3
Sopen07g008040 Solanum pennellii HOM05D004327 ORTHO05D005032 3.3e-164 582.0 389 84.3
Migut.K00240 Erythranthe guttata HOM05D004327 ORTHO05D005032 7.4e-164 580.9 390 80.5
Medtr4g127970 Medicago truncatula HOM05D004327 ORTHO05D005032 9.7e-164 580.5 367 86.1
Ca_21229_v3 Cicer arietinum L. HOM05D004327 ORTHO05D005032 1.3e-163 580.1 374 86.9
TPR.G5449 Trifolium pratense HOM05D004327 ORTHO05D005032 3.7e-163 578.6 386 85.0
FAN22G1646 Fragaria x ananassa HOM05D004327 ORTHO05D005032 8.2e-163 577.4 387 82.2
ECA240G0157 Erigeron canadensis HOM05D004327 ORTHO05D005032 4.1e-162 575.1 370 84.9
PSO170G3199 Papaver somniferum HOM05D004327 ORTHO05D005032 4.1e-162 575.1 390 82.6
FvH4_4g08170 Fragaria vesca HOM05D004327 ORTHO05D005032 5.3e-162 574.7 387 81.9
Peaxi162Scf00231g00726 Petunia axillaris HOM05D004327 ORTHO05D005032 1.5e-161 573.2 384 84.6
Eucgr.C00153 Eucalyptus grandis HOM05D004327 ORTHO05D005032 3.8e-160 568.5 359 85.8
MSTRG.6222 Avicennia marina HOM05D004327 ORTHO05D005032 2.5e-159 565.8 372 83.9
Sabra18G0079100 Salix brachista HOM05D004327 ORTHO05D005032 1.6e-158 563.1 384 84.1
ATR0580G352 Amborella trichopoda HOM05D004327 ORTHO05D005032 1.0e-157 560.5 384 79.7
MBI14_g17374_MAGBIO Magnolia biondii HOM05D004327 ORTHO05D005032 1.4e-157 560.1 387 80.6
SGA_v2.0_scaffold66G22446 Striga asiatica HOM05D004327 ORTHO05D005032 2.6e-156 555.8 386 82.4
ECA236G3505 Erigeron canadensis HOM05D004327 ORTHO05D005032 7.4e-156 554.3 370 83.2
Migut.J01485 Erythranthe guttata HOM05D004327 ORTHO05D005032 1.3e-155 553.5 357 83.2
Lsat_1_v5_gn_7_54620 Lactuca sativa HOM05D004327 ORTHO05D005032 1.4e-154 550.1 351 88.3
THA.LOC104811786 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 1.4e-154 550.1 394 80.2
Dinv41244 Davidia involucrata HOM05D004327 ORTHO05D005032 2.4e-154 549.3 320 95.3
Sc14g0001280 Simmondsia chinensis HOM05D004327 ORTHO05D005032 7.0e-154 547.7 351 86.9
Psat4g169000 Pisum sativum HOM05D004327 ORTHO05D005032 2.0e-153 546.2 350 84.6
CAN.G210.1 Capsicum annuum HOM05D004327 ORTHO05D005032 5.9e-153 544.7 379 83.1
Carub.0008s1793 Capsella rubella HOM05D004327 ORTHO05D005032 2.2e-152 542.7 387 78.8
Thhalv10013843m.g Eutrema salsugineum HOM05D004327 ORTHO05D005032 2.5e-151 539.3 371 81.9
Sp6g19130 Schrenkiella parvula HOM05D004327 ORTHO05D005032 3.2e-151 538.9 387 79.6
CARHR271210 Cardamine hirsuta HOM05D004327 ORTHO05D005032 4.2e-151 538.5 387 78.6
PGR142G4100 Punica granatum HOM05D004327 ORTHO05D005032 5.5e-151 538.1 382 78.3
Aqoxy7G03046 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 3.6e-150 535.4 350 84.6
BolC3t13942H Brassica oleracea HOM05D004327 ORTHO05D005032 4.7e-150 535.0 373 80.7
BraA03t10592Z Brassica rapa HOM05D004327 ORTHO05D005032 8.0e-150 534.3 373 80.7
CDE04G3746 Ceratophyllum demersum HOM05D004327 ORTHO05D005032 8.0e-150 534.3 366 80.6
HPP92_019412 Vanilla planifolia HOM05D004327 ORTHO05D005032 8.0e-150 534.3 366 80.6
AL8G33390 Arabidopsis lyrata HOM05D004327 ORTHO05D005032 6.7e-149 531.2 387 75.7
THA.LOC104813521 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 2.0e-148 529.6 420 75.0
BcaB01g04457 Brassica carinata HOM05D004327 ORTHO05D005032 3.3e-148 528.9 359 82.7
C03p15000 Brassica napus HOM05D004327 ORTHO05D005032 3.7e-147 525.4 343 85.1
A03p12840 Brassica napus HOM05D004327 ORTHO05D005032 4.8e-147 525.0 342 85.4
SalBow6G1961 Salvia bowleyana HOM05D004327 ORTHO05D005032 2.4e-146 522.7 364 79.9
Hund09030 Selenicereus undatus HOM05D004327 ORTHO05D005032 5.3e-146 521.5 365 80.5
BcaC01g06496 Brassica carinata HOM05D004327 ORTHO05D005032 1.2e-145 520.4 368 80.7
unitig_0.g2679 Utricularia gibba HOM05D004327 ORTHO05D005032 2.0e-145 519.6 379 78.6
AT5G57410 Arabidopsis thaliana HOM05D004327 ORTHO05D005032 2.7e-145 519.2 374 76.5
Aa31LG3G13300 Aethionema arabicum HOM05D004327 ORTHO05D005032 2.9e-144 515.8 426 70.7
Sed0007415 Sechium edule HOM05D004327 ORTHO05D005032 1.6e-142 510.0 386 72.5
THA.LOC104803493 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 6.1e-142 508.1 360 81.1
EL10Ac8g18287 Beta vulgaris HOM05D004327 ORTHO05D005032 4.0e-141 505.4 383 76.0
CDE07G0842 Ceratophyllum demersum HOM05D004327 ORTHO05D005032 5.2e-141 505.0 352 79.3
AL3G53050 Arabidopsis lyrata HOM05D004327 ORTHO05D005032 2.6e-140 502.7 361 75.9
CARHR109440 Cardamine hirsuta HOM05D004327 ORTHO05D005032 2.6e-140 502.7 367 74.9
Carub.0003s3311 Capsella rubella HOM05D004327 ORTHO05D005032 3.1e-138 495.7 376 75.0
Lalb_Chr13g0300201 Lupinus albus HOM05D004327 ORTHO05D005032 9.1e-138 494.2 353 78.2
Zm00001eb178290 Zea mays HOM05D004327 ORTHO05D005032 2.0e-137 493.0 384 75.8
SHI02909 Sapria himalayana HOM05D004327 ORTHO05D005032 4.5e-137 491.9 362 77.3
Os08g0242900 Oryza sativa ssp. japonica HOM05D004327 ORTHO05D005032 7.7e-137 491.1 394 73.4
Sp3g32340 Schrenkiella parvula HOM05D004327 ORTHO05D005032 5.5e-135 485.0 366 74.6
BolC9t54328H Brassica oleracea HOM05D004327 ORTHO05D005032 9.5e-135 484.2 344 76.2
CiPaw.08G036000 Carya illinoinensis HOM05D004327 ORTHO05D005032 2.1e-134 483.0 358 74.3
AUR62033220 Chenopodium quinoa HOM05D004327 ORTHO05D005032 1.4e-133 480.3 384 73.4
A09p12090 Brassica napus HOM05D004327 ORTHO05D005032 8.9e-133 477.6 358 75.7
Thhalv10022742m.g Eutrema salsugineum HOM05D004327 ORTHO05D005032 2.0e-132 476.5 366 73.0
BraA09t36853Z Brassica rapa HOM05D004327 ORTHO05D005032 3.4e-132 475.7 351 76.1
BcaB07g31641 Brassica carinata HOM05D004327 ORTHO05D005032 4.4e-132 475.3 365 74.5
BcaC04g22882 Brassica carinata HOM05D004327 ORTHO05D005032 4.4e-132 475.3 369 74.5
C09p14270 Brassica napus HOM05D004327 ORTHO05D005032 4.4e-132 475.3 369 74.5
AagrBONN_evm.TU.Sc2ySwM_117.785 Anthoceros agrestis HOM05D004327 ORTHO05D005032 9.8e-132 474.2 384 67.2
Aa31LG8G15970 Aethionema arabicum HOM05D004327 ORTHO05D005032 1.1e-130 470.7 361 75.6
Nitab4.5_0005945g0010 Nicotiana tabacum HOM05D004327 ORTHO05D005032 4.5e-129 465.3 389 71.7
MELO3C004022.2 Cucumis melo HOM05D004327 ORTHO05D005032 1.5e-127 460.3 312 81.4
Nitab4.5_0004572g0010 Nicotiana tabacum HOM05D004327 ORTHO05D005032 4.0e-125 452.2 379 72.6
AUR62021302 Chenopodium quinoa HOM05D004327 ORTHO05D005032 5.8e-124 448.4 363 73.3
SMO352G0043 Selaginella moellendorffii HOM05D004327 ORTHO05D005032 5.8e-124 448.4 353 68.8
Actinidia38633 Actinidia chinensis HOM05D004327 ORTHO05D005032 9.2e-122 441.0 290 83.1
Lj9A24G29 Lonicera japonica HOM05D004327 ORTHO05D005032 3.5e-121 439.1 268 87.3
FAN17G0468 Fragaria x ananassa HOM05D004327 ORTHO05D005032 1.7e-120 436.8 318 76.1
TAR636G3612 Trochodendron aralioides HOM05D000809 ORTHO05D001196 3.9e-120 435.6 283 88.3
Pp3c12_10100 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.5e-119 433.7 362 64.1
Actinidia27011 Actinidia chinensis HOM05D004327 ORTHO05D005032 3.4e-116 422.5 306 82.4
Pp3c5_23860 Physcomitrium patens HOM05D004327 ORTHO05D005032 4.9e-115 418.7 361 61.8
Pp3c3_22200 Physcomitrium patens HOM05D004327 ORTHO05D005032 3.6e-110 402.5 355 61.7
SMO137G0257 Selaginella moellendorffii HOM05D004327 ORTHO05D005032 1.1e-106 391.0 329 64.1
Pp3c10_16450 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.3e-104 384.0 304 66.1
Mapoly0023s0050 Marchantia polymorpha HOM05D004327 ORTHO05D005032 2.3e-104 383.3 354 59.9
Duzib170G0255 Durio zibethinus HOM05D004327 ORTHO05D005032 5.1e-104 382.1 218 94.0
Haze_22092 Corylus avellana HOM05D004327 ORTHO05D005032 3.3e-103 379.4 267 77.5
CBR_g34541 Chara braunii HOM05D004327 ORTHO05D005032 1.6e-102 377.1 347 58.5
AT2G18876 Arabidopsis thaliana HOM05D004327 ORTHO05D005032 8.1e-102 374.8 270 76.7
Pp3c16_10790 Physcomitrium patens HOM05D004327 ORTHO05D005032 2.4e-101 373.2 355 58.3
Actinidia02748 Actinidia chinensis HOM05D004327 ORTHO05D005032 1.6e-97 360.5 224 88.8
CBR_g4121 Chara braunii HOM05D004327 ORTHO05D005032 1.9e-95 353.6 347 59.4
BcaB01g04461 Brassica carinata HOM05D004327 ORTHO05D005032 8.1e-94 348.2 286 71.7
BcaC01g06490 Brassica carinata HOM05D004327 ORTHO05D005032 8.7e-72 275.0 182 80.8
Oeu042171.1 Olea europaea HOM05D004327 ORTHO05D005032 4.5e-52 209.5 130 87.7
Aqoxy4G01695 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 2.2e-51 207.2 125 89.6
FAN17G0800 Fragaria x ananassa HOM05D004327 ORTHO05D005032 5.0e-51 206.1 139 79.9
Haze_22093 Corylus avellana HOM05D004327 ORTHO05D005032 2.7e-49 200.3 150 77.3
BcaC01g06489 Brassica carinata HOM05D004327 ORTHO05D005032 1.5e-44 184.5 142 76.8
Lj9A25T20 Lonicera japonica HOM05D004327 ORTHO05D005032 8.8e-40 168.7 97 88.7
SEGI_01506 Sequoiadendron giganteum HOM05D004327 ORTHO05D005032 8.0e-33 145.6 105 73.3
HanXRQChr09g0245491 Helianthus annuus HOM05D000502 ORTHO05D005032 1.3e-27 128.3 79 75.9
HanXRQChr08g0229701 Helianthus annuus HOM05D000502 ORTHO05D005032 1.7e-27 127.9 70 82.9
HanXRQChr13g0404041 Helianthus annuus HOM05D000502 ORTHO05D005032 2.5e-26 124.0 70 81.4
SEGI_38031 Sequoiadendron giganteum HOM05D004327 ORTHO05D005032 1.3e-22 111.7 81 76.5
Pp3c26_7180 Physcomitrium patens HOM05D004327 ORTHO05D005032 7.0e-21 105.9 98 51.0
Aqoxy7G03035 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 1.3e-19 101.7 130 50.8
BraA02t05921Z Brassica rapa HOM05D004327 ORTHO05D005032 2.3e-19 100.9 81 69.1
CiPaw.01G111100 Carya illinoinensis HOM05D002292 ORTHO05D005032 4.2e-18 96.7 58 93.1
BcaB05g22345 Brassica carinata HOM05D004327 ORTHO05D005032 9.5e-18 95.5 93 57.0
COL.COLO4_28287 Corchorus olitorius HOM05D004327 ORTHO05D005032 3.0e-16 90.5 54 94.4
Pp3c25_9090 Physcomitrium patens HOM05D004327 ORTHO05D005032 8.3e-14 82.4 97 54.6
C02p14250 Brassica napus HOM05D004327 ORTHO05D032179 2.4e-13 80.9 134 44.8
Glyma.09G140000 Glycine max HOM05D004327 ORTHO05D005032 3.2e-13 80.5 80 51.2
BolC9t54329H Brassica oleracea HOM05D004327 ORTHO05D005032 2.7e-12 77.4 57 77.2
Oeu003512.1 Olea europaea HOM05D004327 ORTHO05D005032 2.7e-12 77.4 42 90.5
BcaC03g14154 Brassica carinata HOM05D004327 ORTHO05D032179 1.6e-09 68.2 75 50.7
PRCOL_00002192 Prasinoderma coloniale HOM05D004327 ORTHO05D005032 1.8e-08 64.7 249 26.9
CiPaw.16G058000 Carya illinoinensis HOM05D002292 ORTHO05D003256 8.9e-08 62.4 38 92.1
MCO09G810 Micromonas commoda HOM05D004327 ORTHO05D005032 7.5e-07 59.3 163 27.0


User provided reference genes

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