Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007594 Camellia sinensis var. sinensis HOM05D038181 ORTHO05D033864 4.2e-161 571.2 274 100.0
CSS0013279 Camellia sinensis var. sinensis HOM05D038181 ORTHO05D033864 2.2e-117 426.0 209 98.1
Dinv39966 Davidia involucrata HOM05D038181 ORTHO05D000252 1.3e-16 91.3 99 52.5
CSS0018040 Camellia sinensis var. sinensis HOM05D003827 ORTHO05D004518 2.4e-15 87.0 81 55.6
CSS0021062 Camellia sinensis var. sinensis HOM05D003827 ORTHO05D033864 3.1e-15 86.7 82 56.1
CSS0029515 Camellia sinensis var. sinensis HOM05D003827 ORTHO05D004518 5.3e-15 85.9 82 54.9
CSS0045357 Camellia sinensis var. sinensis HOM05D003827 ORTHO05D004518 5.3e-15 85.9 82 54.9
CSS0002956 Camellia sinensis var. sinensis HOM05D003827 ORTHO05D004518 1.5e-14 84.3 82 56.1
CSS0048058 Camellia sinensis var. sinensis HOM05D003827 ORTHO05D004518 2.0e-14 84.0 82 53.7
Haze_15113 Corylus avellana HOM05D000401 ORTHO05D000252 1.1e-12 78.2 102 46.1
TAR628G1031 Trochodendron aralioides HOM05D000401 ORTHO05D000252 1.1e-12 78.2 114 43.9
TAR628G1738 Trochodendron aralioides HOM05D000401 ORTHO05D000252 1.9e-12 77.4 114 43.9
Lj2A449T51 Lonicera japonica HOM05D000401 ORTHO05D000252 2.5e-12 77.0 113 41.6
Cfa004285 Carpinus fangiana HOM05D000401 ORTHO05D000252 9.4e-12 75.1 101 45.5
Hma1.2p1_0717F.1_g208240 Hydrangea macrophylla HOM05D000401 ORTHO05D000252 4.7e-11 72.8 120 41.7
CiPaw.01G035600 Carya illinoinensis HOM05D000401 ORTHO05D000252 1.8e-10 70.9 102 43.1
Oeu002971.1 Olea europaea HOM05D000401 ORTHO05D000252 1.4e-07 61.2 139 37.4
Lsat_1_v5_gn_3_78360 Lactuca sativa HOM05D000401 ORTHO05D000252 2.4e-07 60.5 113 38.9
Nn5g29550 Nelumbo nucifera HOM05D000401 ORTHO05D000252 2.4e-07 60.5 139 34.5
TWI09G1341 Tripterygium wilfordii HOM05D000401 ORTHO05D000252 2.4e-07 60.5 133 33.8
Nitab4.5_0001466g0080 Nicotiana tabacum HOM05D000401 ORTHO05D000252 3.1e-07 60.1 144 34.7
Nitab4.5_0004721g0060 Nicotiana tabacum HOM05D000401 ORTHO05D000252 4.1e-07 59.7 127 35.4
Cc07_g09290 Coffea canephora HOM05D000401 ORTHO05D000252 1.5e-06 57.8 109 34.9
Thecc.01G038700 Theobroma cacao HOM05D000401 ORTHO05D000252 2.6e-06 57.0 108 38.9


User provided reference genes

Program Settings