Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007590 Camellia sinensis var. sinensis HOM05D005637 ORTHO05D006983 1.0e-54 216.5 110 100.0
CSS0002747 Camellia sinensis var. sinensis HOM05D005637 ORTHO05D006983 9.2e-27 123.6 131 56.5
Dinv10648 Davidia involucrata HOM05D005637 ORTHO05D006983 6.2e-23 110.9 61 83.6
vmacro17563 Vaccinium macrocarpon HOM05D005637 ORTHO05D006983 6.2e-23 110.9 72 70.8
Cpa.g.sc57.35 Carica papaya HOM05D005637 ORTHO05D006983 8.1e-23 110.5 61 82.0
CDE02G3019 Ceratophyllum demersum HOM05D005637 ORTHO05D006983 1.1e-22 110.2 61 82.0
ATR0564G491 Amborella trichopoda HOM05D005637 ORTHO05D006983 1.4e-22 109.8 61 82.0
Nn2g15887 Nelumbo nucifera HOM05D005637 ORTHO05D006983 1.4e-22 109.8 61 82.0
CSS0030079 Camellia sinensis var. sinensis HOM05D005637 ORTHO05D006983 4.0e-22 108.2 61 80.3
TWI75G0754 Tripterygium wilfordii HOM05D005637 ORTHO05D006983 4.0e-22 108.2 61 80.3
VMungo1309G0753 Vigna mungo HOM05D005637 ORTHO05D006983 4.0e-22 108.2 61 80.3
MBI02_g20483_MAGBIO Magnolia biondii HOM05D005637 ORTHO05D006983 5.2e-22 107.8 64 76.6
AL1G39180 Arabidopsis lyrata HOM05D005637 ORTHO05D006983 6.8e-22 107.5 61 78.7
AT1G26550 Arabidopsis thaliana HOM05D005637 ORTHO05D006983 6.8e-22 107.5 61 78.7
BcaB03g11995 Brassica carinata HOM05D005637 ORTHO05D006983 6.8e-22 107.5 61 78.7
A08p27370 Brassica napus HOM05D005637 ORTHO05D006983 6.8e-22 107.5 61 78.7
A09p39930 Brassica napus HOM05D005637 ORTHO05D006983 6.8e-22 107.5 61 78.7
C05p24490 Brassica napus HOM05D005637 ORTHO05D006983 6.8e-22 107.5 61 78.7
BolC5t31183H Brassica oleracea HOM05D005637 ORTHO05D006983 6.8e-22 107.5 61 78.7
BraA08t34678Z Brassica rapa HOM05D005637 ORTHO05D006983 6.8e-22 107.5 61 78.7
BraA09t39492Z Brassica rapa HOM05D005637 ORTHO05D006983 6.8e-22 107.5 61 78.7
Cc00_g08390 Coffea canephora HOM05D005637 ORTHO05D006983 6.8e-22 107.5 61 80.3
Thhalv10009046m.g Eutrema salsugineum HOM05D005637 ORTHO05D006983 6.8e-22 107.5 61 78.7
Sp1g22230 Schrenkiella parvula HOM05D005637 ORTHO05D006983 6.8e-22 107.5 61 78.7
CARHR025420 Cardamine hirsuta HOM05D005637 ORTHO05D006983 8.9e-22 107.1 61 77.0
Glyma.04G166700 Glycine max HOM05D005637 ORTHO05D006983 8.9e-22 107.1 61 78.7
Os09g0411700 Oryza sativa ssp. japonica HOM05D005637 ORTHO05D006983 8.9e-22 107.1 54 88.9
Phvul.009G185800 Phaseolus vulgaris HOM05D005637 ORTHO05D006983 8.9e-22 107.1 61 80.3
Sabra08G0067300 Salix brachista HOM05D005637 ORTHO05D006983 8.9e-22 107.1 61 77.0
GSVIVG01007979001 Vitis vinifera HOM05D005637 ORTHO05D006983 8.9e-22 107.1 61 80.3
ClCG09G021890 Citrullus lanatus HOM05D005637 ORTHO05D006983 1.2e-21 106.7 61 80.3
Prupe.1G278400 Prunus persica HOM05D005637 ORTHO05D006983 1.2e-21 106.7 61 77.0
Atru.chr9.197 Acer truncatum HOM05D005637 ORTHO05D006983 1.5e-21 106.3 113 54.0
Actinidia04874 Actinidia chinensis HOM05D005637 ORTHO05D006983 1.5e-21 106.3 61 80.3
arahy.Tifrunner.gnm1.ann1.M53U4W Arachis hypogaea HOM05D005637 ORTHO05D006983 1.5e-21 106.3 61 77.0
CiPaw.11G046600 Carya illinoinensis HOM05D005637 ORTHO05D006983 1.5e-21 106.3 61 78.7
Carub.0001s2449 Capsella rubella HOM05D005637 ORTHO05D006983 2.0e-21 105.9 61 77.0
DCAR_026064 Daucus carota HOM05D005637 ORTHO05D006983 2.0e-21 105.9 61 77.0
Migut.I00202 Erythranthe guttata HOM05D005637 ORTHO05D006983 2.0e-21 105.9 61 77.0
Eucgr.G02481 Eucalyptus grandis HOM05D005637 ORTHO05D006983 2.0e-21 105.9 61 78.7
FvH4_4g30970 Fragaria vesca HOM05D005637 ORTHO05D006983 2.0e-21 105.9 61 78.7
FAN07G0507 Fragaria x ananassa HOM05D005637 ORTHO05D006983 2.0e-21 105.9 61 78.7
FAN12G2219 Fragaria x ananassa HOM05D005637 ORTHO05D006983 2.0e-21 105.9 61 78.7
FAN17G1506 Fragaria x ananassa HOM05D005637 ORTHO05D006983 2.0e-21 105.9 61 78.7
FAN22G0476 Fragaria x ananassa HOM05D005637 ORTHO05D006983 2.0e-21 105.9 61 78.7
Hma1.2p1_0060F.1_g033550 Hydrangea macrophylla HOM05D005637 ORTHO05D006983 2.0e-21 105.9 61 77.0
Rhsim08G0152700 Rhododendron simsii HOM05D005637 ORTHO05D006983 2.0e-21 105.9 61 77.0
Potri.008G089900 Populus trichocarpa HOM05D005637 ORTHO05D006983 2.6e-21 105.5 61 78.7
Sed0018902 Sechium edule HOM05D005637 ORTHO05D006983 2.6e-21 105.5 64 78.1
Sc04g0002850 Simmondsia chinensis HOM05D005637 ORTHO05D006983 2.6e-21 105.5 61 77.0
MELO3C002951.2 Cucumis melo HOM05D005637 ORTHO05D006983 3.4e-21 105.1 61 78.7
Glyma.06G195800 Glycine max HOM05D005637 ORTHO05D006983 3.4e-21 105.1 61 77.0
Mapoly0082s0039 Marchantia polymorpha HOM05D005637 ORTHO05D006983 3.4e-21 105.1 60 80.0
Psat5g200400 Pisum sativum HOM05D005637 ORTHO05D006983 3.4e-21 105.1 61 77.0
TAR496G0002 Trochodendron aralioides HOM05D005637 ORTHO05D006983 3.4e-21 105.1 61 78.7
TAR629G0341 Trochodendron aralioides HOM05D005637 ORTHO05D006983 3.4e-21 105.1 61 78.7
Aqoxy3G03463 Aquilegia oxysepala HOM05D005637 ORTHO05D006983 4.4e-21 104.8 63 73.0
arahy.Tifrunner.gnm1.ann1.KT0WW2 Arachis hypogaea HOM05D005637 ORTHO05D006983 4.4e-21 104.8 61 75.4
CAN.G648.12 Capsicum annuum HOM05D005637 ORTHO05D006983 4.4e-21 104.8 54 87.0
MD00G1081600 Malus domestica HOM05D005637 ORTHO05D006983 4.4e-21 104.8 57 82.5
Manes.14G080801 Manihot esculenta HOM05D005637 ORTHO05D006983 4.4e-21 104.8 61 78.7
Oeu052447.1 Olea europaea HOM05D005637 ORTHO05D006983 4.4e-21 104.8 61 78.7
SGA_v2.0_scaffold313G48341 Striga asiatica HOM05D005637 ORTHO05D006983 4.4e-21 104.8 61 75.4
HPP92_011002 Vanilla planifolia HOM05D005637 ORTHO05D006983 4.4e-21 104.8 54 85.2
Ciclev10022740m.g Citrus clementina HOM05D005637 ORTHO05D006983 5.8e-21 104.4 60 78.3
RcHm_v2.0_Chr4g0439331 Rosa chinensis HOM05D005637 ORTHO05D006983 5.8e-21 104.4 61 77.0
Hund02632 Selenicereus undatus HOM05D005637 ORTHO05D006983 5.8e-21 104.4 63 74.6
AagrBONN_evm.TU.Sc2ySwM_228.632 Anthoceros agrestis HOM05D005637 ORTHO05D006983 7.6e-21 104.0 61 75.4
AagrBONN_evm.TU.Sc2ySwM_362.586 Anthoceros agrestis HOM05D005637 ORTHO05D006983 7.6e-21 104.0 61 75.4
CBR_g30502 Chara braunii HOM05D005637 ORTHO05D006983 7.6e-21 104.0 61 78.7
PGR119G0762 Punica granatum HOM05D005637 ORTHO05D006983 7.6e-21 104.0 61 77.0
SMO367G1093 Selaginella moellendorffii HOM05D005637 ORTHO05D006983 7.6e-21 104.0 62 75.8
CANSAT80G1152 Cannabis sativa HOM05D005637 ORTHO05D006983 9.9e-21 103.6 61 75.4
Ca_14657_v3 Cicer arietinum L. HOM05D005637 ORTHO05D006983 9.9e-21 103.6 61 75.4
Haze_07302 Corylus avellana HOM05D005637 ORTHO05D006983 9.9e-21 103.6 54 85.2
CsaV3_5G025290 Cucumis sativus L. HOM05D005637 ORTHO05D006983 9.9e-21 103.6 61 77.0
ECA247G3019 Erigeron canadensis HOM05D005637 ORTHO05D006983 9.9e-21 103.6 61 77.0
LjContig00102g0010410 Lotus japonicus HOM05D005637 ORTHO05D006983 9.9e-21 103.6 61 77.0
LjContig00103g0026967 Lotus japonicus HOM05D005637 ORTHO05D006983 9.9e-21 103.6 61 77.0
Lalb_Chr08g0235561 Lupinus albus HOM05D005637 ORTHO05D006983 9.9e-21 103.6 61 75.4
Medtr3g037570 Medicago truncatula HOM05D005637 ORTHO05D006983 9.9e-21 103.6 61 75.4
QL10p017509 Quercus lobata HOM05D005637 ORTHO05D006983 9.9e-21 103.6 61 75.4
Solyc12g036200.2 Solanum lycopersicum HOM05D005637 ORTHO05D006983 9.9e-21 103.6 54 85.2
Sopen12g016310 Solanum pennellii HOM05D005637 ORTHO05D006983 9.9e-21 103.6 54 85.2
PGSC0003DMG400021937 Solanum tuberosum HOM05D005637 ORTHO05D006983 9.9e-21 103.6 54 85.2
Thecc.03G093000 Theobroma cacao HOM05D005637 ORTHO05D006983 9.9e-21 103.6 61 77.0
TPR.G11903 Trifolium pratense HOM05D005637 ORTHO05D006983 9.9e-21 103.6 61 75.4
EL10Ac5g11048 Beta vulgaris HOM05D005637 ORTHO05D006983 1.3e-20 103.2 61 77.0
C03p72380 Brassica napus HOM05D005637 ORTHO05D006983 1.3e-20 103.2 58 79.3
BolC3t19533H Brassica oleracea HOM05D005637 ORTHO05D006983 1.3e-20 103.2 58 79.3
Nitab4.5_0001195g0050 Nicotiana tabacum HOM05D005637 ORTHO05D006983 1.3e-20 103.2 61 75.4
Nitab4.5_0001997g0100 Nicotiana tabacum HOM05D005637 ORTHO05D006983 1.3e-20 103.2 61 75.4
THA.LOC104822041 Tarenaya hassleriana HOM05D005637 ORTHO05D006983 1.3e-20 103.2 61 77.0
unitig_748.g7812 Utricularia gibba HOM05D005637 ORTHO05D006983 1.3e-20 103.2 60 76.7
BcaC01g01741 Brassica carinata HOM05D005637 ORTHO05D006983 2.2e-20 102.4 51 88.2
CSS0006784 Camellia sinensis var. sinensis HOM05D005637 ORTHO05D006983 2.2e-20 102.4 61 78.7
Sabra10G0125900 Salix brachista HOM05D005637 ORTHO05D006983 2.2e-20 102.4 54 85.2
COL.COLO4_36923 Corchorus olitorius HOM05D005637 ORTHO05D006983 2.9e-20 102.1 61 75.4
Duzib068G0698 Durio zibethinus HOM05D005637 ORTHO05D006983 2.9e-20 102.1 61 75.4
Duzib205G1800 Durio zibethinus HOM05D005637 ORTHO05D006983 2.9e-20 102.1 61 75.4
HanXRQChr04g0107301 Helianthus annuus HOM05D005637 ORTHO05D006983 2.9e-20 102.1 61 75.4
Pp3c26_7640 Physcomitrium patens HOM05D005637 ORTHO05D006983 2.9e-20 102.1 61 75.4
Gohir.A07G064200 Gossypium hirsutum HOM05D005637 ORTHO05D006983 4.9e-20 101.3 61 73.8
Gohir.D07G069000 Gossypium hirsutum HOM05D005637 ORTHO05D006983 4.9e-20 101.3 61 73.8
Gorai.001G072500 Gossypium raimondii HOM05D005637 ORTHO05D006983 4.9e-20 101.3 61 73.8
PSO832G2445 Papaver somniferum HOM05D005637 ORTHO05D006983 4.9e-20 101.3 61 75.4
Peaxi162Scf00106g00427 Petunia axillaris HOM05D005637 ORTHO05D006983 6.4e-20 100.9 54 81.5
CSS0019959 Camellia sinensis var. sinensis HOM05D005637 ORTHO05D006983 8.4e-20 100.5 61 77.0
Ah.02g113670 Amaranthus hybridus HOM05D005637 ORTHO05D006983 1.1e-19 100.1 54 81.5
MBI04_g11434_MAGBIO Magnolia biondii HOM05D005637 ORTHO05D006983 1.9e-19 99.4 61 72.1
Ah.02g113660 Amaranthus hybridus HOM05D005637 ORTHO05D006983 2.4e-19 99.0 54 83.3
CSS0040245 Camellia sinensis var. sinensis HOM05D005637 ORTHO05D006983 3.2e-19 98.6 59 78.0
Zm00001eb312430 Zea mays HOM05D005637 ORTHO05D006983 4.1e-19 98.2 54 79.6
AUR62008440 Chenopodium quinoa HOM05D005637 ORTHO05D006983 6.0e-18 94.4 61 68.9
CANSAT80G0999 Cannabis sativa HOM05D005637 ORTHO05D006983 2.3e-17 92.4 67 67.2
AUR62021650 Chenopodium quinoa HOM05D005637 ORTHO05D006983 1.6e-15 86.3 48 77.1
C07p19400 Brassica napus HOM05D005637 ORTHO05D006983 2.0e-13 79.3 94 52.1
BolC7t42459H Brassica oleracea HOM05D005637 ORTHO05D006983 4.4e-13 78.2 94 52.1
Lsat_1_v5_gn_1_14240 Lactuca sativa HOM05D005637 ORTHO05D006983 3.8e-12 75.1 37 83.8
TAR365G0307 Trochodendron aralioides HOM05D005637 ORTHO05D006983 4.9e-12 74.7 38 81.6
BcaC06g35140 Brassica carinata HOM05D005637 ORTHO05D006983 3.5e-10 68.6 36 83.3
LjContig00261g0007071 Lotus japonicus HOM05D005637 ORTHO05D006983 1.7e-09 66.2 40 72.5
BcaC03g15376 Brassica carinata HOM05D005637 ORTHO05D006983 3.9e-09 65.1 31 90.3
MCO13G336 Micromonas commoda HOM05D006179 ORTHO05D008370 8.7e-09 63.9 72 44.4
Haze_26720 Corylus avellana HOM05D000811 ORTHO05D004743 1.3e-07 60.1 74 39.2
AagrBONN_evm.TU.Sc2ySwM_228.1572 Anthoceros agrestis HOM05D000811 ORTHO05D004743 6.9e-06 54.3 87 34.5


User provided reference genes

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