Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007537 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D024711 7.3e-68 260.4 127 100.0
CSS0039809 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D004854 2.0e-65 252.3 127 97.6
CSS0041785 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D024711 6.0e-62 240.7 127 94.5
CSS0035511 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D004854 1.2e-59 233.0 127 89.8
CSS0033051 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D014920 9.3e-47 190.3 136 75.7
CSS0002196 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D014920 3.5e-46 188.3 131 76.3
unitig_579.g34798 Utricularia gibba HOM05D001018 ORTHO05D000626 2.1e-27 125.9 134 59.0
unitig_807.g34417 Utricularia gibba HOM05D000920 ORTHO05D000626 1.5e-25 119.8 122 59.0
unitig_146.g30219 Utricularia gibba HOM05D000920 ORTHO05D000626 7.6e-25 117.5 134 55.2
Zm00001eb262430 Zea mays HOM05D001847 ORTHO05D004854 8.4e-24 114.0 105 64.8
Zm00001eb264000 Zea mays HOM05D000920 ORTHO05D004854 7.9e-22 107.5 106 62.3
Sopen00g002260 Solanum pennellii HOM05D000920 ORTHO05D004854 1.9e-20 102.8 145 44.8
Zm00001eb264050 Zea mays HOM05D000920 ORTHO05D004854 1.4e-18 96.7 105 59.0
unitig_791.g33060 Utricularia gibba HOM05D001018 ORTHO05D000626 1.2e-17 93.6 102 55.9
Sopen00g001800 Solanum pennellii HOM05D000920 ORTHO05D004854 1.0e-16 90.5 96 58.3
Zm00001eb437520 Zea mays HOM05D010106 ORTHO05D000626 2.5e-15 85.9 79 59.5
A04p09260 Brassica napus HOM05D000920 ORTHO05D003704 9.4e-15 84.0 76 65.8
unitig_177.g32847 Utricularia gibba HOM05D000920 ORTHO05D004854 1.6e-14 83.2 63 71.4
PRCOL_00001067 Prasinoderma coloniale HOM05D026590 ORTHO05D024711 7.9e-14 80.9 76 60.5
PRCOL_00001107 Prasinoderma coloniale HOM05D026590 ORTHO05D024711 7.9e-14 80.9 76 60.5
BNapus_Darmor_BZH_scaffold_107p00020 Brassica napus HOM05D000920 ORTHO05D004854 1.8e-13 79.7 42 92.9
BNapus_Darmor_BZH_scaffold_107p00050 Brassica napus HOM05D000920 ORTHO05D004854 1.8e-13 79.7 42 92.9
A06p24760 Brassica napus HOM05D000920 ORTHO05D004854 1.5e-12 76.6 43 88.4
Sc21g0003270 Simmondsia chinensis HOM05D000920 ORTHO05D004854 1.5e-12 76.6 43 86.0
Lj5g0000109 Lotus japonicus HOM05D000920 ORTHO05D000626 1.9e-12 76.3 41 90.2
LjContig00488g0002218 Lotus japonicus HOM05D000920 ORTHO05D000626 1.9e-12 76.3 41 90.2
Zm00001eb262130 Zea mays HOM05D010106 ORTHO05D000626 1.9e-12 76.3 42 88.1
Zm00001eb263800 Zea mays HOM05D010106 ORTHO05D000626 1.9e-12 76.3 42 88.1
Zm00001eb263830 Zea mays HOM05D010106 ORTHO05D000626 1.9e-12 76.3 42 88.1
Zm00001eb439260 Zea mays HOM05D010106 ORTHO05D000626 1.9e-12 76.3 42 88.1
A06p24170 Brassica napus HOM05D000920 ORTHO05D000626 4.3e-12 75.1 76 61.8
A09p31370 Brassica napus HOM05D000920 ORTHO05D004854 1.3e-11 73.6 42 85.7
CsaV3_6G018510 Cucumis sativus L. HOM05D012847 ORTHO05D014920 1.3e-11 73.6 54 70.4
Sc11g0005300 Simmondsia chinensis HOM05D012847 ORTHO05D014920 1.7e-11 73.2 73 57.5
A05p22620 Brassica napus HOM05D000920 ORTHO05D004854 2.2e-11 72.8 42 88.1
A06p25000 Brassica napus HOM05D000920 ORTHO05D004854 2.8e-11 72.4 42 88.1
Oeu043254.2 Olea europaea HOM05D000920 ORTHO05D022949 2.8e-11 72.4 41 85.4
unitig_161.g31392 Utricularia gibba HOM05D001018 ORTHO05D000626 8.2e-11 70.9 60 66.7
HPP92_007077 Vanilla planifolia HOM05D000920 ORTHO05D004854 2.4e-10 69.3 158 41.8
A06p24460 Brassica napus HOM05D000920 ORTHO05D004854 3.1e-10 68.9 42 85.7
CDE02G3641 Ceratophyllum demersum HOM05D012847 ORTHO05D014920 3.1e-10 68.9 89 51.7
A05p22020 Brassica napus HOM05D000920 ORTHO05D004854 6.9e-10 67.8 43 79.1
A05p22350 Brassica napus HOM05D000920 ORTHO05D004854 6.9e-10 67.8 43 81.4
Lsat_1_v5_gn_4_174220 Lactuca sativa HOM05D012847 ORTHO05D014920 9.1e-10 67.4 55 65.5
unitig_724.g29527 Utricularia gibba HOM05D000920 ORTHO05D004854 9.1e-10 67.4 77 57.1
Sopen07g009370 Solanum pennellii HOM05D000920 ORTHO05D000626 1.2e-09 67.0 42 81.0
unitig_161.g31377 Utricularia gibba HOM05D000920 ORTHO05D000626 1.5e-09 66.6 102 49.0
Zm00001eb436930 Zea mays HOM05D010106 ORTHO05D000626 2.6e-09 65.9 132 40.2
unitig_675.g29244 Utricularia gibba HOM05D000920 ORTHO05D003704 3.4e-09 65.5 37 83.8
unitig_683.g34677 Utricularia gibba HOM05D000920 ORTHO05D000626 3.4e-09 65.5 37 83.8
unitig_796.g33546 Utricularia gibba HOM05D000920 ORTHO05D000626 3.4e-09 65.5 37 83.8
A05p22260 Brassica napus HOM05D000920 ORTHO05D004854 5.9e-09 64.7 43 79.1
A05p22480 Brassica napus HOM05D000920 ORTHO05D000626 5.9e-09 64.7 38 86.8
Oeu024742.1 Olea europaea HOM05D007167 ORTHO05D001679 1.0e-08 63.9 40 77.5
Zm00001eb262370 Zea mays HOM05D010106 ORTHO05D000626 2.2e-08 62.8 31 90.3
CBR_g56703 Chara braunii HOM05D010018 ORTHO05D004854 3.8e-08 62.0 86 46.5
A06p24570 Brassica napus HOM05D000920 ORTHO05D004854 1.1e-07 60.5 43 72.1
Atru.chr9.100 Acer truncatum HOM05D000920 ORTHO05D000626 1.4e-07 60.1 30 93.3
A05p22320 Brassica napus HOM05D012847 ORTHO05D020225 1.4e-07 60.1 47 66.0
EL10As19g24180 Beta vulgaris HOM05D000920 ORTHO05D004854 3.2e-07 58.9 31 90.3
Nn085s42708 Nelumbo nucifera HOM05D000920 ORTHO05D012001 4.2e-07 58.5 29 96.6
Nn085s42709 Nelumbo nucifera HOM05D000920 ORTHO05D012001 4.2e-07 58.5 29 96.6
Nn3g20606 Nelumbo nucifera HOM05D000920 ORTHO05D012001 4.2e-07 58.5 29 96.6
Nn3g20607 Nelumbo nucifera HOM05D000920 ORTHO05D012001 4.2e-07 58.5 29 96.6
Nn5g31238 Nelumbo nucifera HOM05D000920 ORTHO05D012001 4.2e-07 58.5 29 96.6
Nn5g31239 Nelumbo nucifera HOM05D000920 ORTHO05D012001 4.2e-07 58.5 29 96.6
Nn5g31261 Nelumbo nucifera HOM05D000920 ORTHO05D012001 4.2e-07 58.5 29 96.6
Nn5g31262 Nelumbo nucifera HOM05D000920 ORTHO05D012001 4.2e-07 58.5 29 96.6
Nn6g32713 Nelumbo nucifera HOM05D000920 ORTHO05D012001 4.2e-07 58.5 29 96.6
Nn6g32714 Nelumbo nucifera HOM05D000920 ORTHO05D012001 4.2e-07 58.5 29 96.6
Nn6g32747 Nelumbo nucifera HOM05D000920 ORTHO05D012001 4.2e-07 58.5 29 96.6
Nn6g32748 Nelumbo nucifera HOM05D000920 ORTHO05D012001 4.2e-07 58.5 29 96.6
Nn6g32841 Nelumbo nucifera HOM05D000920 ORTHO05D012001 4.2e-07 58.5 29 96.6
Nn6g32842 Nelumbo nucifera HOM05D000920 ORTHO05D012001 4.2e-07 58.5 29 96.6
Nn6g32904 Nelumbo nucifera HOM05D000920 ORTHO05D012001 4.2e-07 58.5 29 96.6
Nn6g32905 Nelumbo nucifera HOM05D000920 ORTHO05D012001 4.2e-07 58.5 29 96.6
Nn6g32926 Nelumbo nucifera HOM05D000920 ORTHO05D012001 4.2e-07 58.5 29 96.6
Nn6g32927 Nelumbo nucifera HOM05D000920 ORTHO05D012001 4.2e-07 58.5 29 96.6
Nn6g32946 Nelumbo nucifera HOM05D000920 ORTHO05D012001 4.2e-07 58.5 29 96.6
Nn6g33096 Nelumbo nucifera HOM05D000920 ORTHO05D012001 4.2e-07 58.5 29 96.6
Nn6g33097 Nelumbo nucifera HOM05D000920 ORTHO05D012001 4.2e-07 58.5 29 96.6
Nn6g33155 Nelumbo nucifera HOM05D000920 ORTHO05D012001 4.2e-07 58.5 29 96.6
Nn6g33159 Nelumbo nucifera HOM05D000920 ORTHO05D012001 4.2e-07 58.5 29 96.6
Nn6g33160 Nelumbo nucifera HOM05D000920 ORTHO05D012001 4.2e-07 58.5 29 96.6
Nn6g33174 Nelumbo nucifera HOM05D000920 ORTHO05D012001 4.2e-07 58.5 29 96.6
Rhsim05G0123800 Rhododendron simsii HOM05D000920 ORTHO05D004854 4.2e-07 58.5 29 96.6
unitig_676.g29554 Utricularia gibba HOM05D000920 ORTHO05D004854 4.2e-07 58.5 70 51.4
Thhalv10028160m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 5.5e-07 58.2 39 79.5
Thhalv10028221m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 5.5e-07 58.2 39 79.5
Thhalv10028284m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 5.5e-07 58.2 39 79.5
BcaC08g42807 Brassica carinata HOM05D012847 ORTHO05D014920 1.2e-06 57.0 53 58.5
A06p24120 Brassica napus HOM05D001018 ORTHO05D000626 1.2e-06 57.0 32 87.5
Lj6g0027271 Lotus japonicus HOM05D000920 ORTHO05D004854 1.2e-06 57.0 48 66.7
LjContig00006g0000950 Lotus japonicus HOM05D000920 ORTHO05D004854 1.2e-06 57.0 48 66.7
LjContig00006g0017690 Lotus japonicus HOM05D000920 ORTHO05D004854 1.2e-06 57.0 48 66.7
LjContig00479g0009062 Lotus japonicus HOM05D000920 ORTHO05D004854 1.2e-06 57.0 48 66.7
PGSC0003DMG400001030 Solanum tuberosum HOM05D000920 ORTHO05D004854 1.2e-06 57.0 40 65.0
A05p22300 Brassica napus HOM05D000920 ORTHO05D003704 1.6e-06 56.6 47 61.7
Sc21g0003540 Simmondsia chinensis HOM05D007167 ORTHO05D000922 2.1e-06 56.2 42 66.7
Sopen00g001690 Solanum pennellii HOM05D000920 ORTHO05D000626 2.1e-06 56.2 33 81.8
unitig_668.g29654 Utricularia gibba HOM05D000920 ORTHO05D004854 3.6e-06 55.5 31 87.1
Oeu009014.1 Olea europaea HOM05D026590 ORTHO05D004854 6.1e-06 54.7 42 69.0


User provided reference genes

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