Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007534 Camellia sinensis var. sinensis HOM05D004876 ORTHO05D005488 3.5e-73 278.5 170 100.0
vmacro06902 Vaccinium macrocarpon HOM05D004876 ORTHO05D005488 1.1e-55 220.3 179 74.3
Rhsim03G0153600 Rhododendron simsii HOM05D004876 ORTHO05D005488 1.8e-53 213.0 179 76.0
Dinv37250 Davidia involucrata HOM05D004876 ORTHO05D005488 4.9e-51 204.9 170 78.2
Nitab4.5_0006356g0050 Nicotiana tabacum HOM05D004876 ORTHO05D005488 4.3e-47 191.8 170 71.8
HanXRQChr14g0460541 Helianthus annuus HOM05D004876 ORTHO05D005488 2.1e-46 189.5 169 74.6
Nitab4.5_0000171g0270 Nicotiana tabacum HOM05D004876 ORTHO05D005488 3.6e-46 188.7 170 70.0
Prupe.2G265600 Prunus persica HOM05D004876 ORTHO05D005488 4.7e-46 188.3 169 59.2
MD01G1169400 Malus domestica HOM05D004876 ORTHO05D005488 1.0e-45 187.2 168 57.1
CiPaw.02G093900 Carya illinoinensis HOM05D004876 ORTHO05D005488 5.2e-45 184.9 168 58.9
Oeu006067.1 Olea europaea HOM05D004876 ORTHO05D005488 1.5e-44 183.3 169 71.0
Lsat_1_v5_gn_5_104800 Lactuca sativa HOM05D004876 ORTHO05D005488 2.0e-44 183.0 167 73.1
Peaxi162Scf00073g02225 Petunia axillaris HOM05D004876 ORTHO05D005488 2.0e-44 183.0 170 69.4
TWI53G0120 Tripterygium wilfordii HOM05D004876 ORTHO05D005488 4.4e-44 181.8 178 62.9
Haze_17370 Corylus avellana HOM05D004876 ORTHO05D005488 9.8e-44 180.6 168 69.6
CiPaw.04G175400 Carya illinoinensis HOM05D004876 ORTHO05D005488 1.7e-43 179.9 168 57.7
ClCG07G004830 Citrullus lanatus HOM05D004876 ORTHO05D005488 1.7e-43 179.9 170 55.9
TAR636G2293 Trochodendron aralioides HOM05D004876 ORTHO05D005488 2.2e-43 179.5 172 58.7
QL08p065087 Quercus lobata HOM05D004876 ORTHO05D005488 2.9e-43 179.1 172 56.4
Manes.10G044800 Manihot esculenta HOM05D004876 ORTHO05D005488 3.7e-43 178.7 172 69.2
COL.COLO4_19475 Corchorus olitorius HOM05D004876 ORTHO05D005488 6.4e-43 177.9 181 69.6
EL10Ac5g10661 Beta vulgaris HOM05D004876 ORTHO05D005488 1.4e-42 176.8 169 63.9
CAN.G1229.8 Capsicum annuum HOM05D004876 ORTHO05D005488 1.9e-42 176.4 167 68.9
Cc02_g05210 Coffea canephora HOM05D004876 ORTHO05D005488 1.9e-42 176.4 169 69.8
Thecc.10G185000 Theobroma cacao HOM05D004876 ORTHO05D005488 1.9e-42 176.4 178 64.6
CsaV3_5G010740 Cucumis sativus L. HOM05D004876 ORTHO05D005488 2.4e-42 176.0 170 55.3
Sed0020097 Sechium edule HOM05D004876 ORTHO05D005488 5.4e-42 174.9 170 54.7
Duzib114G0677 Durio zibethinus HOM05D004876 ORTHO05D005488 9.2e-42 174.1 175 57.7
ECA247G1702 Erigeron canadensis HOM05D004876 ORTHO05D008274 2.0e-41 172.9 163 68.7
Potri.019G061200 Populus trichocarpa HOM05D004876 ORTHO05D005488 2.0e-41 172.9 175 58.3
Lj1g0004349 Lotus japonicus HOM05D004876 ORTHO05D005488 7.8e-41 171.0 170 54.7
MELO3C020110.2 Cucumis melo HOM05D004876 ORTHO05D005488 1.0e-40 170.6 170 54.7
Gohir.A10G177600 Gossypium hirsutum HOM05D004876 ORTHO05D005488 1.0e-40 170.6 178 66.3
MBI15_g39395_MAGBIO Magnolia biondii HOM05D004876 ORTHO05D005488 1.0e-40 170.6 166 59.6
Gohir.D10G184200 Gossypium hirsutum HOM05D004876 ORTHO05D005488 1.3e-40 170.2 178 66.3
Gorai.011G206400 Gossypium raimondii HOM05D004876 ORTHO05D005488 1.3e-40 170.2 178 66.3
TWI09G0651 Tripterygium wilfordii HOM05D004876 ORTHO05D005488 1.3e-40 170.2 183 54.6
Ciclev10032334m.g Citrus clementina HOM05D004876 ORTHO05D005488 1.7e-40 169.9 158 71.5
PGSC0003DMG400011645 Solanum tuberosum HOM05D004876 ORTHO05D005488 1.7e-40 169.9 168 70.8
VMungo1309G0380 Vigna mungo HOM05D004876 ORTHO05D005488 3.0e-40 169.1 171 54.4
Cpa.g.sc128.23 Carica papaya HOM05D004876 ORTHO05D005488 3.9e-40 168.7 170 55.3
Sopen05g030710 Solanum pennellii HOM05D004876 ORTHO05D005488 3.9e-40 168.7 165 67.9
Phvul.009G042700 Phaseolus vulgaris HOM05D004876 ORTHO05D005488 6.6e-40 167.9 169 52.7
Migut.F01232 Erythranthe guttata HOM05D004876 ORTHO05D005488 1.1e-39 167.2 169 55.6
Glyma.06G141500 Glycine max HOM05D004876 ORTHO05D005488 1.9e-39 166.4 169 55.0
Duzib106G1237 Durio zibethinus HOM05D004876 ORTHO05D005488 3.3e-39 165.6 168 67.9
MSTRG.8381 Avicennia marina HOM05D004876 ORTHO05D005488 9.5e-39 164.1 170 65.3
AUR62008150 Chenopodium quinoa HOM05D004876 ORTHO05D005488 9.5e-39 164.1 169 53.3
AUR62028732 Chenopodium quinoa HOM05D004876 ORTHO05D005488 9.5e-39 164.1 169 53.3
Phvul.005G185900 Phaseolus vulgaris HOM05D004876 ORTHO05D005488 9.5e-39 164.1 169 52.1
Solyc05g052180.3 Solanum lycopersicum HOM05D004876 ORTHO05D005488 9.5e-39 164.1 160 68.8
CANSAT64G2122 Cannabis sativa HOM05D004876 ORTHO05D005488 2.1e-38 162.9 176 48.9
FAN12G2601 Fragaria x ananassa HOM05D004876 ORTHO05D005488 2.1e-38 162.9 164 54.3
FvH4_7g26120 Fragaria vesca HOM05D004876 ORTHO05D005488 2.8e-38 162.5 173 53.2
FAN10G2920 Fragaria x ananassa HOM05D004876 ORTHO05D005488 3.6e-38 162.2 173 53.2
Atru.chr12.194 Acer truncatum HOM05D004876 ORTHO05D005488 4.7e-38 161.8 180 51.7
Ca_29506_v3 Cicer arietinum L. HOM05D004876 ORTHO05D005488 8.1e-38 161.0 169 66.3
Lalb_Chr11g0067701 Lupinus albus HOM05D004876 ORTHO05D005488 8.1e-38 161.0 170 52.9
CANSAT64G1352 Cannabis sativa HOM05D004876 ORTHO05D005488 1.1e-37 160.6 176 48.3
Lsat_1_v5_gn_2_126741 Lactuca sativa HOM05D004876 ORTHO05D005488 1.1e-37 160.6 167 68.3
FAN03G2458 Fragaria x ananassa HOM05D004876 ORTHO05D005488 1.8e-37 159.8 173 52.6
PSO675G4155 Papaver somniferum HOM05D004876 ORTHO05D005488 1.8e-37 159.8 168 52.4
PGR142G2846 Punica granatum HOM05D004876 ORTHO05D005488 1.8e-37 159.8 172 49.4
SalBow7G3110 Salvia bowleyana HOM05D004876 ORTHO05D005488 4.0e-37 158.7 172 65.1
Aqoxy6G02070 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 6.8e-37 157.9 170 51.2
PSO170G6098 Papaver somniferum HOM05D004876 ORTHO05D005488 6.8e-37 157.9 172 52.3
THA.LOC104803220 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 6.8e-37 157.9 173 61.3
Actinidia13638 Actinidia chinensis HOM05D004876 ORTHO05D005488 1.2e-36 157.1 132 65.2
Os03g0114200 Oryza sativa ssp. japonica HOM05D004876 ORTHO05D005488 2.0e-36 156.4 167 48.5
RcHm_v2.0_Chr1g0372561 Rosa chinensis HOM05D004876 ORTHO05D005488 2.0e-36 156.4 164 53.0
THA.LOC104824370 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 2.0e-36 156.4 171 50.9
Ah.11g051130 Amaranthus hybridus HOM05D004876 ORTHO05D005488 2.6e-36 156.0 160 65.6
TPR.G13975 Trifolium pratense HOM05D004876 ORTHO05D005488 3.4e-36 155.6 172 52.9
TPR.G28952 Trifolium pratense HOM05D004876 ORTHO05D005488 9.8e-36 154.1 169 52.1
Lj6g0009237 Lotus japonicus HOM05D004876 ORTHO05D005488 1.3e-35 153.7 170 64.7
FAN06G0183 Fragaria x ananassa HOM05D004876 ORTHO05D005488 2.2e-35 152.9 178 51.7
Ca_16858_v3 Cicer arietinum L. HOM05D004876 ORTHO05D005488 3.7e-35 152.1 186 60.8
unitig_736.g22953 Utricularia gibba HOM05D004876 ORTHO05D005488 3.7e-35 152.1 170 61.2
ATR0733G227 Amborella trichopoda HOM05D004876 ORTHO05D005488 6.4e-35 151.4 170 50.6
FvH4_4g04970 Fragaria vesca HOM05D004876 ORTHO05D005488 6.4e-35 151.4 183 48.6
PGR142G0395 Punica granatum HOM05D004876 ORTHO05D005488 8.3e-35 151.0 163 60.7
Aqoxy2G01672 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 2.4e-34 149.4 162 50.0
ATR1127G178 Amborella trichopoda HOM05D004876 ORTHO05D005488 4.1e-34 148.7 166 49.4
GSVIVG01038577001 Vitis vinifera HOM05D004876 ORTHO05D005488 4.1e-34 148.7 115 83.5
arahy.Tifrunner.gnm1.ann1.58ULDB Arachis hypogaea HOM05D004876 ORTHO05D005488 9.2e-34 147.5 182 60.4
HPP92_015433 Vanilla planifolia HOM05D004876 ORTHO05D005488 9.2e-34 147.5 163 49.7
AL4G38670 Arabidopsis lyrata HOM05D004876 ORTHO05D005488 1.2e-33 147.1 174 48.9
Medtr3g093790 Medicago truncatula HOM05D004876 ORTHO05D005488 2.1e-33 146.4 156 65.4
AT2G40780 Arabidopsis thaliana HOM05D004876 ORTHO05D005488 6.0e-33 144.8 174 48.9
Nitab4.5_0008902g0030 Nicotiana tabacum HOM05D004876 ORTHO05D005488 6.0e-33 144.8 170 64.7
AL4G34450 Arabidopsis lyrata HOM05D004876 ORTHO05D005488 7.8e-33 144.4 178 48.9
Carub.0004s2308 Capsella rubella HOM05D004876 ORTHO05D005488 1.0e-32 144.1 177 46.9
Psat5g069360 Pisum sativum HOM05D004876 ORTHO05D005488 1.0e-32 144.1 174 51.7
Rhsim04G0113200 Rhododendron simsii HOM05D004876 ORTHO05D005488 1.0e-32 144.1 188 50.0
SGA_v2.0_scaffold2G00887 Striga asiatica HOM05D004876 ORTHO05D005488 1.0e-32 144.1 176 61.4
Sc10g0003050 Simmondsia chinensis HOM05D004876 ORTHO05D005488 1.7e-32 143.3 103 68.0
Zm00001eb000910 Zea mays HOM05D004876 ORTHO05D005488 3.0e-32 142.5 169 47.9
BolC4t28355H Brassica oleracea HOM05D004876 ORTHO05D005488 3.9e-32 142.1 174 46.6
Dinv21858 Davidia involucrata HOM05D004876 ORTHO05D005488 8.6e-32 141.0 106 83.0
CDE07G1038 Ceratophyllum demersum HOM05D004876 ORTHO05D005488 1.9e-31 139.8 173 50.9
BcaB06g29175 Brassica carinata HOM05D004876 ORTHO05D005488 2.5e-31 139.4 177 46.3
A04p31160 Brassica napus HOM05D004876 ORTHO05D005488 2.5e-31 139.4 174 45.4
C04p68560 Brassica napus HOM05D004876 ORTHO05D005488 2.5e-31 139.4 174 45.4
Migut.A00831 Erythranthe guttata HOM05D004876 ORTHO05D005488 4.3e-31 138.7 162 47.5
BraA04t18571Z Brassica rapa HOM05D004876 ORTHO05D005488 5.6e-31 138.3 174 44.8
Sp4g23100 Schrenkiella parvula HOM05D004876 ORTHO05D005488 1.2e-30 137.1 174 46.6
Peaxi162Scf00167g01129 Petunia axillaris HOM05D004876 ORTHO05D005488 2.1e-30 136.3 121 59.5
FAN17G0734 Fragaria x ananassa HOM05D004876 ORTHO05D005488 4.7e-30 135.2 240 38.3
Thhalv10017311m.g Eutrema salsugineum HOM05D004876 ORTHO05D005488 5.2e-29 131.7 169 44.4
CARHR135880 Cardamine hirsuta HOM05D004876 ORTHO05D005488 6.8e-29 131.3 180 44.4
Aa31LG3G1350 Aethionema arabicum HOM05D004876 ORTHO05D005488 1.5e-28 130.2 168 45.8
PGSC0003DMG400020604 Solanum tuberosum HOM05D004876 ORTHO05D005488 3.8e-27 125.6 106 79.2
SEGI_18121 Sequoiadendron giganteum HOM05D004876 ORTHO05D005488 1.1e-26 124.0 175 44.0
THA.LOC104808402 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 1.1e-26 124.0 117 56.4
Eucgr.G03147 Eucalyptus grandis HOM05D004876 ORTHO05D005488 1.4e-26 123.6 191 50.3
Lj8A52T23 Lonicera japonica HOM05D004876 ORTHO05D005488 1.9e-26 123.2 106 59.4
Sopen03g025590 Solanum pennellii HOM05D004876 ORTHO05D005488 1.9e-26 123.2 106 77.4
Ca_29868_v3 Cicer arietinum L. HOM05D000260 ORTHO05D000318 4.1e-26 122.1 169 43.8
Aqoxy5G02193 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 7.1e-26 121.3 135 49.6
BcaB01g03515 Brassica carinata HOM05D004876 ORTHO05D005488 2.1e-25 119.8 174 43.1
CiPaw.04G175300 Carya illinoinensis HOM05D004876 ORTHO05D005488 4.6e-25 118.6 104 59.6
Sabra19G0074800 Salix brachista HOM05D004876 ORTHO05D005488 4.6e-25 118.6 112 57.1
HanXRQChr07g0204961 Helianthus annuus HOM05D004876 ORTHO05D005488 4.3e-23 112.1 109 57.8
BcaC02g12879 Brassica carinata HOM05D004876 ORTHO05D005488 4.7e-22 108.6 117 48.7
BcaB05g22749 Brassica carinata HOM05D004876 ORTHO05D005488 3.1e-21 105.9 116 49.1
Nn1g06656 Nelumbo nucifera HOM05D004876 ORTHO05D005488 1.2e-20 104.0 110 59.1
Mapoly0014s0200 Marchantia polymorpha HOM05D004876 ORTHO05D005488 6.4e-19 98.2 176 36.4
Pp3c16_8280 Physcomitrium patens HOM05D004876 ORTHO05D005488 6.0e-17 91.7 187 36.4
Nn2g10267 Nelumbo nucifera HOM05D004876 ORTHO05D005488 3.3e-15 85.9 80 57.5
Actinidia31636 Actinidia chinensis HOM05D004876 ORTHO05D005488 1.8e-13 80.1 129 41.1
C03p81600 Brassica napus HOM05D004876 ORTHO05D005488 1.5e-12 77.0 108 41.7
BolC3t20430H Brassica oleracea HOM05D004876 ORTHO05D005488 1.5e-12 77.0 108 41.7
AagrBONN_evm.TU.Sc2ySwM_368.2679 Anthoceros agrestis HOM05D004876 ORTHO05D005488 2.6e-12 76.3 170 32.9
C01p26050 Brassica napus HOM05D004876 ORTHO05D005488 2.6e-12 76.3 102 43.1
TPR.G24790 Trifolium pratense HOM05D004876 ORTHO05D005488 4.6e-09 65.5 76 48.7
Oeu039385.1 Olea europaea HOM05D002276 ORTHO05D002381 1.5e-07 60.5 66 86.4
Nitab4.5_0001671g0020 Nicotiana tabacum HOM05D004876 ORTHO05D005488 9.6e-07 57.8 64 50.0
TAR622G0554 Trochodendron aralioides HOM05D006000 ORTHO05D007749 1.6e-06 57.0 106 36.8
ATR1127G058 Amborella trichopoda HOM05D004876 ORTHO05D005488 2.1e-06 56.6 61 44.3
Zm00001eb290470 Zea mays HOM05D004876 ORTHO05D005488 2.1e-06 56.6 84 35.7


User provided reference genes

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