Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007510 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000063 4.6e-64 247.7 120 100.0
CSS0027284 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000063 1.0e-18 97.1 107 49.5
QL02p033813 Quercus lobata HOM05D000010 ORTHO05D000063 4.7e-16 88.2 105 48.6
TAR208G0001 Trochodendron aralioides HOM05D000010 ORTHO05D000063 5.7e-14 81.3 106 41.5
TAR381G0109 Trochodendron aralioides HOM05D000010 ORTHO05D000063 5.7e-14 81.3 106 41.5
Potri.013G113100 Populus trichocarpa HOM05D000010 ORTHO05D000063 7.5e-14 80.9 101 43.6
Duzib116G0667 Durio zibethinus HOM05D000010 ORTHO05D000063 3.7e-13 78.6 107 42.1
Potri.019G083600 Populus trichocarpa HOM05D000010 ORTHO05D000063 6.3e-13 77.8 102 43.1
GSVIVG01034485001 Vitis vinifera HOM05D000010 ORTHO05D000063 8.3e-13 77.4 108 41.7
Sabra13G0096000 Salix brachista HOM05D000010 ORTHO05D000063 1.1e-12 77.0 101 43.6
Thecc.08G183500 Theobroma cacao HOM05D000010 ORTHO05D000063 1.8e-12 76.3 107 42.1
Sabra19G0095000 Salix brachista HOM05D000010 ORTHO05D000063 7.0e-12 74.3 102 40.2
TAR628G0820 Trochodendron aralioides HOM05D000010 ORTHO05D000063 7.0e-12 74.3 88 44.3
Manes.02G191900 Manihot esculenta HOM05D000010 ORTHO05D000063 7.7e-11 70.9 112 39.3
Duzib177G0238 Durio zibethinus HOM05D000010 ORTHO05D000063 1.3e-10 70.1 105 36.2
MSTRG.22447 Avicennia marina HOM05D000010 ORTHO05D000063 2.9e-10 68.9 105 38.1
CiPaw.16G061200 Carya illinoinensis HOM05D000010 ORTHO05D000063 5.0e-10 68.2 105 41.9
Haze_17935 Corylus avellana HOM05D000010 ORTHO05D000063 5.0e-10 68.2 105 41.0
Oeu030002.1 Olea europaea HOM05D000010 ORTHO05D000063 3.3e-09 65.5 104 38.5
Cfa018183 Carpinus fangiana HOM05D000010 ORTHO05D000063 4.2e-09 65.1 106 41.5
MSTRG.25440 Avicennia marina HOM05D000010 ORTHO05D000063 9.5e-09 63.9 106 33.0
Actinidia23330 Actinidia chinensis HOM05D000010 ORTHO05D009770 2.8e-08 62.4 102 39.2
Prupe.8G058100 Prunus persica HOM05D000010 ORTHO05D000063 1.0e-07 60.5 110 35.5
MD10G1048500 Malus domestica HOM05D000010 ORTHO05D000063 2.3e-07 59.3 109 35.8
Phvul.007G089600 Phaseolus vulgaris HOM05D000010 ORTHO05D000063 2.3e-07 59.3 100 33.0
Aqoxy5G02595 Aquilegia oxysepala HOM05D000010 ORTHO05D000063 5.2e-07 58.2 72 43.1
PSO017G4784 Papaver somniferum HOM05D000010 ORTHO05D000063 2.6e-06 55.8 99 32.3
Atru.chr13.1777 Acer truncatum HOM05D000010 ORTHO05D000063 5.7e-06 54.7 102 33.3
Glyma.10G216400 Glycine max HOM05D000010 ORTHO05D000063 5.7e-06 54.7 101 30.7
Glyma.20G175500 Glycine max HOM05D000010 ORTHO05D000063 5.7e-06 54.7 100 34.0


User provided reference genes

Program Settings