Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007505 Camellia sinensis var. sinensis HOM05D005478 ORTHO05D006426 2.1e-71 272.7 184 100.0
Actinidia18441 Actinidia chinensis HOM05D005478 ORTHO05D006426 3.8e-41 172.2 189 54.5
Hma1.2p1_0818F.1_g223270 Hydrangea macrophylla HOM05D005478 ORTHO05D006426 3.3e-37 159.1 188 50.5
Actinidia36124 Actinidia chinensis HOM05D005478 ORTHO05D006426 8.2e-36 154.5 192 49.0
Rhsim10G0014600 Rhododendron simsii HOM05D005478 ORTHO05D006426 9.0e-35 151.0 190 58.4
CiPaw.04G029700 Carya illinoinensis HOM05D005478 ORTHO05D006426 5.0e-33 145.2 188 47.3
Actinidia05981 Actinidia chinensis HOM05D005478 ORTHO05D006426 1.9e-32 143.3 185 50.3
vmacro05877 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 4.2e-32 142.1 219 51.6
GSVIVG01032384001 Vitis vinifera HOM05D005478 ORTHO05D006426 1.2e-31 140.6 184 46.2
CiPaw.03G045600 Carya illinoinensis HOM05D005478 ORTHO05D006426 2.7e-31 139.4 191 43.5
vmacro18294 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 7.9e-31 137.9 222 48.6
QL02p074001 Quercus lobata HOM05D005478 ORTHO05D006426 6.7e-30 134.8 182 41.8
Haze_14759 Corylus avellana HOM05D005478 ORTHO05D006426 1.5e-29 133.7 184 52.7
Cfa007338 Carpinus fangiana HOM05D005478 ORTHO05D006426 2.5e-29 132.9 184 52.7
Ciclev10016916m.g Citrus clementina HOM05D005478 ORTHO05D006426 4.3e-29 132.1 184 47.8
TAR371G0105 Trochodendron aralioides HOM05D005478 ORTHO05D006426 5.7e-29 131.7 184 47.3
TWI36G1604 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 7.4e-29 131.3 185 44.9
TWI56G0849 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 7.4e-29 131.3 184 42.4
TAR629G3442 Trochodendron aralioides HOM05D005478 ORTHO05D006426 9.7e-29 131.0 177 51.4
Atru.chr6.2431 Acer truncatum HOM05D005478 ORTHO05D006426 1.3e-28 130.6 180 50.0
Prupe.3G293900 Prunus persica HOM05D005478 ORTHO05D006426 1.8e-27 126.7 185 40.5
Cpa.g.sc108.77 Carica papaya HOM05D005478 ORTHO05D006426 2.4e-27 126.3 186 41.4
COL.COLO4_30424 Corchorus olitorius HOM05D005478 ORTHO05D006426 2.4e-27 126.3 187 40.1
CsaV3_3G042880 Cucumis sativus L. HOM05D005478 ORTHO05D006426 6.9e-27 124.8 190 38.4
DCAR_011260 Daucus carota HOM05D005478 ORTHO05D006426 9.0e-27 124.4 179 43.6
ClCG10G013780 Citrullus lanatus HOM05D005478 ORTHO05D006426 1.5e-26 123.6 188 39.9
MELO3C026588.2 Cucumis melo HOM05D005478 ORTHO05D006426 4.5e-26 122.1 190 37.9
Lalb_Chr22g0360721 Lupinus albus HOM05D005478 ORTHO05D006426 5.9e-26 121.7 183 39.9
MSTRG.3284 Avicennia marina HOM05D005478 ORTHO05D006426 1.0e-25 120.9 183 41.5
Duzib235G1061 Durio zibethinus HOM05D005478 ORTHO05D006426 1.0e-25 120.9 182 40.7
Medtr6g004420 Medicago truncatula HOM05D005478 ORTHO05D006426 1.3e-25 120.6 182 41.8
MSTRG.15534 Avicennia marina HOM05D005478 ORTHO05D006426 1.7e-25 120.2 183 41.5
Duzib160G0719 Durio zibethinus HOM05D005478 ORTHO05D006426 1.7e-25 120.2 181 38.1
Thecc.06G091700 Theobroma cacao HOM05D005478 ORTHO05D006426 2.9e-25 119.4 184 44.0
Oeu033728.1 Olea europaea HOM05D005478 ORTHO05D006426 3.8e-25 119.0 192 43.2
CANSAT64G0255 Cannabis sativa HOM05D005478 ORTHO05D006426 5.0e-25 118.6 183 41.5
Gohir.D09G082100 Gossypium hirsutum HOM05D005478 ORTHO05D006426 8.5e-25 117.9 183 51.9
Gorai.006G097900 Gossypium raimondii HOM05D005478 ORTHO05D006426 1.1e-24 117.5 182 51.6
Sp2g16690 Schrenkiella parvula HOM05D005478 ORTHO05D006426 1.1e-24 117.5 188 37.8
TWI12G0237 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 1.4e-24 117.1 180 40.6
Gohir.A09G082300 Gossypium hirsutum HOM05D005478 ORTHO05D006426 1.9e-24 116.7 183 50.8
Carub.0005s0595 Capsella rubella HOM05D005478 ORTHO05D006426 2.5e-24 116.3 187 38.0
VMungo0464G1533 Vigna mungo HOM05D005478 ORTHO05D006426 2.5e-24 116.3 183 39.3
THA.LOC104825319 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 3.2e-24 115.9 188 38.3
AL5G16940 Arabidopsis lyrata HOM05D005478 ORTHO05D006426 4.2e-24 115.5 188 37.2
PGR142G0633 Punica granatum HOM05D005478 ORTHO05D006426 7.2e-24 114.8 191 41.4
FAN05G2721 Fragaria x ananassa HOM05D005478 ORTHO05D006426 9.4e-24 114.4 185 46.5
Sed0022021 Sechium edule HOM05D005478 ORTHO05D006426 9.4e-24 114.4 181 39.2
FAN02G1690 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.6e-23 113.6 179 47.5
Nn3g16686 Nelumbo nucifera HOM05D005478 ORTHO05D006426 1.6e-23 113.6 177 54.8
Aa31LG2G5140 Aethionema arabicum HOM05D005478 ORTHO05D006426 3.6e-23 112.5 191 34.6
Ca_04142_v3 Cicer arietinum L. HOM05D005478 ORTHO05D006426 3.6e-23 112.5 180 50.0
Potri.001G343200 Populus trichocarpa HOM05D005478 ORTHO05D006426 3.6e-23 112.5 185 37.8
Oeu048609.1 Olea europaea HOM05D005478 ORTHO05D006426 4.6e-23 112.1 188 47.9
TPR.G31952 Trifolium pratense HOM05D005478 ORTHO05D006426 4.6e-23 112.1 181 40.9
Duzib192G0894 Durio zibethinus HOM05D005478 ORTHO05D006426 6.1e-23 111.7 180 41.1
Glyma.05G002400 Glycine max HOM05D005478 ORTHO05D006426 1.0e-22 110.9 180 39.4
Lj2g0025845 Lotus japonicus HOM05D005478 ORTHO05D006426 1.0e-22 110.9 179 49.7
Migut.K01412 Erythranthe guttata HOM05D005478 ORTHO05D006426 1.4e-22 110.5 177 45.8
SGA_v2.0_scaffold47G17517 Striga asiatica HOM05D005478 ORTHO05D006426 1.4e-22 110.5 178 44.9
CARHR148890 Cardamine hirsuta HOM05D005478 ORTHO05D006426 1.8e-22 110.2 181 37.6
Thhalv10004961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 1.8e-22 110.2 189 37.0
Glyma.19G002600 Glycine max HOM05D005478 ORTHO05D006426 3.0e-22 109.4 176 48.9
BraA09t35982Z Brassica rapa HOM05D005478 ORTHO05D006426 5.1e-22 108.6 181 37.6
Manes.17G111100 Manihot esculenta HOM05D005478 ORTHO05D006426 5.1e-22 108.6 182 45.1
FvH4_6g51790 Fragaria vesca HOM05D005478 ORTHO05D006426 6.7e-22 108.2 180 45.6
Sabra16G0222600 Salix brachista HOM05D005478 ORTHO05D006426 8.8e-22 107.8 184 37.0
AT3G27520 Arabidopsis thaliana HOM05D005478 ORTHO05D006426 1.1e-21 107.5 197 35.0
BcaC04g23900 Brassica carinata HOM05D005478 ORTHO05D006426 1.1e-21 107.5 178 38.2
C09p03650 Brassica napus HOM05D005478 ORTHO05D006426 1.1e-21 107.5 178 38.2
Aqoxy5G03740 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 1.5e-21 107.1 184 34.2
FAN09G1593 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.5e-21 107.1 180 45.6
FAN14G4849 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.5e-21 107.1 180 45.6
BolC9t53284H Brassica oleracea HOM05D005478 ORTHO05D006426 2.5e-21 106.3 182 37.9
A09p03440 Brassica napus HOM05D005478 ORTHO05D006426 3.3e-21 105.9 181 37.0
Eucgr.I01730 Eucalyptus grandis HOM05D005478 ORTHO05D006426 3.3e-21 105.9 180 50.0
Thhalv10027961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 7.4e-21 104.8 178 34.8
unitig_88.g27693 Utricularia gibba HOM05D000631 ORTHO05D000524 7.4e-21 104.8 184 36.4
RcHm_v2.0_Chr2g0173291 Rosa chinensis HOM05D005478 ORTHO05D006426 9.7e-21 104.4 127 44.1
ATR0824G160 Amborella trichopoda HOM05D005478 ORTHO05D006426 1.3e-20 104.0 175 35.4
arahy.Tifrunner.gnm1.ann1.47572L Arachis hypogaea HOM05D005478 ORTHO05D006426 1.3e-20 104.0 184 44.0
Solyc02g093450.3 Solanum lycopersicum HOM05D005478 ORTHO05D006426 1.3e-20 104.0 188 37.2
SGA_v2.0_scaffold30G12408 Striga asiatica HOM05D005478 ORTHO05D006426 1.3e-20 104.0 190 50.0
Sc07g0003180 Simmondsia chinensis HOM05D005478 ORTHO05D006426 1.7e-20 103.6 180 36.7
BcaC06g30982 Brassica carinata HOM05D005478 ORTHO05D006426 2.2e-20 103.2 179 36.9
Hund15527 Selenicereus undatus HOM05D005478 ORTHO05D006426 2.8e-20 102.8 182 35.7
Phvul.004G004600 Phaseolus vulgaris HOM05D005478 ORTHO05D006426 3.7e-20 102.4 185 49.7
A06p41110 Brassica napus HOM05D005478 ORTHO05D006426 4.8e-20 102.1 177 34.5
BraA06t27034Z Brassica rapa HOM05D005478 ORTHO05D006426 4.8e-20 102.1 177 34.5
Lalb_Chr24g0403571 Lupinus albus HOM05D005478 ORTHO05D006426 4.8e-20 102.1 185 48.6
PGSC0003DMG400012636 Solanum tuberosum HOM05D005478 ORTHO05D006426 4.8e-20 102.1 180 37.2
C07p36630 Brassica napus HOM05D005478 ORTHO05D006426 6.3e-20 101.7 180 34.4
PSO478G1356 Papaver somniferum HOM05D005478 ORTHO05D006426 1.1e-19 100.9 179 40.8
PSO017G4510 Papaver somniferum HOM05D005478 ORTHO05D006426 1.4e-19 100.5 178 40.4
Sopen02g038220 Solanum pennellii HOM05D005478 ORTHO05D006426 1.4e-19 100.5 180 36.7
BcaB04g19441 Brassica carinata HOM05D005478 ORTHO05D006426 2.4e-19 99.8 187 37.4
HanXRQChr14g0451171 Helianthus annuus HOM05D005478 ORTHO05D006426 5.3e-19 98.6 181 48.6
BolC7t44179H Brassica oleracea HOM05D005478 ORTHO05D006426 9.1e-19 97.8 180 33.9
BcaC06g33809 Brassica carinata HOM05D005478 ORTHO05D006426 1.2e-18 97.4 180 33.9
Lsat_1_v5_gn_0_18280 Lactuca sativa HOM05D005478 ORTHO05D006426 1.5e-18 97.1 184 37.0
MD17G1022200 Malus domestica HOM05D005478 ORTHO05D006426 2.6e-18 96.3 196 39.3
AUR62028419 Chenopodium quinoa HOM05D005478 ORTHO05D006426 3.4e-18 95.9 189 33.3
HanXRQChr07g0199031 Helianthus annuus HOM05D005478 ORTHO05D006426 3.4e-18 95.9 178 39.3
Psat1g053440 Pisum sativum HOM05D005478 ORTHO05D006426 3.4e-18 95.9 180 37.2
MD09G1022900 Malus domestica HOM05D005478 ORTHO05D006426 5.9e-18 95.1 191 33.5
THA.LOC104825211 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 7.7e-18 94.7 133 39.8
ECA238G3024 Erigeron canadensis HOM05D005478 ORTHO05D006426 1.3e-17 94.0 183 43.2
MBI14_g36718_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 1.3e-17 94.0 179 50.3
arahy.Tifrunner.gnm1.ann1.WAXE9D Arachis hypogaea HOM05D005478 ORTHO05D006426 2.2e-17 93.2 210 38.6
AUR62041940 Chenopodium quinoa HOM05D005478 ORTHO05D006426 2.2e-17 93.2 185 32.4
Lsat_1_v5_gn_2_91160 Lactuca sativa HOM05D005478 ORTHO05D006426 2.2e-17 93.2 184 44.6
PSO063G0871 Papaver somniferum HOM05D005478 ORTHO05D006426 3.8e-17 92.4 179 34.1
CDE09G0806 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 6.5e-17 91.7 176 29.5
PSO754G0087 Papaver somniferum HOM05D005478 ORTHO05D006426 6.5e-17 91.7 179 34.1
HPP92_006182 Vanilla planifolia HOM05D005478 ORTHO05D006426 8.5e-17 91.3 173 33.5
CDE02G4674 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 2.5e-16 89.7 174 28.7
Peaxi162Scf00700g00430 Petunia axillaris HOM05D005478 ORTHO05D006426 1.6e-15 87.0 164 33.5
Aqoxy1G02464 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 3.6e-15 85.9 163 33.1
SEGI_00200 Sequoiadendron giganteum HOM05D005478 ORTHO05D006426 7.4e-13 78.2 171 31.6
Dinv25725 Davidia involucrata HOM05D005478 ORTHO05D006426 1.1e-11 74.3 96 63.5
Os02g0595300 Oryza sativa ssp. japonica HOM05D005478 ORTHO05D006426 4.1e-11 72.4 181 45.3
Ah.02g128220 Amaranthus hybridus HOM05D005478 ORTHO05D006426 2.6e-10 69.7 188 29.3
Dinv33426 Davidia involucrata HOM05D005478 ORTHO05D006426 3.5e-10 69.3 50 64.0
Cc07_g01510 Coffea canephora HOM05D005478 ORTHO05D006426 2.5e-08 63.2 60 45.0
Oeu018990.1 Olea europaea HOM05D005478 ORTHO05D006426 3.2e-08 62.8 88 65.9
MBI10_g11211_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 5.5e-08 62.0 53 52.8
Gohir.D05G130900 Gossypium hirsutum HOM05D005478 ORTHO05D006426 2.1e-07 60.1 59 52.5
Nitab4.5_0000326g0190 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.7e-07 59.7 50 54.0
Nn3g16214 Nelumbo nucifera HOM05D005478 ORTHO05D006426 3.6e-07 59.3 48 54.2
MBI07_g39476_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 6.1e-07 58.5 53 49.1
Lju41C43G9 Lonicera japonica HOM05D005478 ORTHO05D006426 1.8e-06 57.0 88 55.7


User provided reference genes

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