Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007490 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 0.0e+00 1203.7 702 100.0
CSS0028328 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 0.0e+00 1181.0 702 98.3
CSS0047270 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 0.0e+00 1127.1 703 92.9
CSS0009096 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 0.0e+00 1122.5 703 90.2
CSS0024766 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 1.6e-281 972.6 702 83.0
CSS0013290 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 3.9e-272 941.4 579 90.3
CSS0002755 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 1.0e-251 873.6 553 87.2
CSS0006813 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 1.0e-248 863.6 553 87.7
Dinv04678 Davidia involucrata HOM05D003265 ORTHO05D003819 2.7e-111 407.1 580 48.1
Actinidia38248 Actinidia chinensis HOM05D003265 ORTHO05D003819 4.0e-107 393.3 566 46.5
Rhsim03G0122700 Rhododendron simsii HOM05D003265 ORTHO05D003819 2.4e-83 314.3 555 41.8
vmacro07090 Vaccinium macrocarpon HOM05D003265 ORTHO05D003819 1.5e-77 295.0 551 40.1
TAR633G0548 Trochodendron aralioides HOM05D003265 ORTHO05D003819 3.0e-54 217.6 655 35.7
GSVIVG01016342001 Vitis vinifera HOM05D003265 ORTHO05D003819 4.0e-51 207.2 520 37.1
Lj1A924T53 Lonicera japonica HOM05D003265 ORTHO05D003819 1.2e-47 195.7 589 33.3
TAR623G0684 Trochodendron aralioides HOM05D003265 ORTHO05D003819 1.5e-37 162.2 475 34.9
QL08p056892 Quercus lobata HOM05D003265 ORTHO05D003819 2.9e-33 147.9 476 31.1
DCAR_015272 Daucus carota HOM05D003265 ORTHO05D015078 2.0e-26 125.2 489 32.3
Cfa001593 Carpinus fangiana HOM05D003265 ORTHO05D003819 3.9e-22 110.9 501 27.7
Haze_16937 Corylus avellana HOM05D003265 ORTHO05D003819 4.4e-21 107.5 462 27.9
Nn2g12994 Nelumbo nucifera HOM05D003265 ORTHO05D003819 4.4e-21 107.5 308 31.8
Thecc.10G067600 Theobroma cacao HOM05D003265 ORTHO05D003819 1.4e-19 102.4 470 30.4
Aqoxy3G02606 Aquilegia oxysepala HOM05D003265 ORTHO05D003819 7.0e-19 100.1 453 33.3
Duzib128G1251 Durio zibethinus HOM05D003265 ORTHO05D003819 1.2e-18 99.4 472 28.0
Potri.008G044500 Populus trichocarpa HOM05D003265 ORTHO05D003819 1.6e-18 99.0 321 30.5
Potri.010G217000 Populus trichocarpa HOM05D003265 ORTHO05D003819 3.5e-18 97.8 303 32.7
Ciclev10033690m.g Citrus clementina HOM05D003265 ORTHO05D003819 4.5e-18 97.4 465 28.2
Cc09_g02720 Coffea canephora HOM05D014857 ORTHO05D015078 4.5e-18 97.4 463 30.0
Gohir.D13G022100 Gossypium hirsutum HOM05D003265 ORTHO05D003819 4.5e-18 97.4 473 28.3
Gorai.013G024900 Gossypium raimondii HOM05D003265 ORTHO05D003819 5.9e-18 97.1 473 28.3
Manes.10G042100 Manihot esculenta HOM05D003265 ORTHO05D003819 7.7e-18 96.7 350 30.6
Gohir.A13G021500 Gossypium hirsutum HOM05D003265 ORTHO05D003819 1.7e-17 95.5 367 28.6
Prupe.2G219100 Prunus persica HOM05D003265 ORTHO05D003819 1.9e-16 92.0 390 30.3
Cpa.g.sc53.18 Carica papaya HOM05D003265 ORTHO05D003819 3.2e-16 91.3 482 28.8
Cfa017508 Carpinus fangiana HOM05D003265 ORTHO05D003819 5.5e-16 90.5 635 25.2
Haze_20650 Corylus avellana HOM05D003265 ORTHO05D003819 1.2e-15 89.4 597 26.6
Nn2g10657 Nelumbo nucifera HOM05D003265 ORTHO05D003819 1.6e-15 89.0 434 27.2
PSO339G3745 Papaver somniferum HOM05D003265 ORTHO05D003819 4.7e-15 87.4 724 27.3
Sabra08G0030800 Salix brachista HOM05D003265 ORTHO05D003819 4.7e-15 87.4 299 30.4
Duzib106G1383 Durio zibethinus HOM05D003265 ORTHO05D003819 1.4e-14 85.9 404 30.7
Duzib106G1563 Durio zibethinus HOM05D003265 ORTHO05D003819 1.8e-14 85.5 485 28.2
Dinv37252 Davidia involucrata HOM05D003265 ORTHO05D003819 5.2e-14 84.0 274 32.1
Peaxi162Scf00122g00211 Petunia axillaris HOM05D014857 ORTHO05D015078 6.8e-14 83.6 475 26.7
Prupe.6G241300 Prunus persica HOM05D003265 ORTHO05D003819 2.0e-13 82.0 399 32.1
COL.COLO4_23753 Corchorus olitorius HOM05D003265 ORTHO05D003819 2.6e-13 81.6 484 27.7
RhsimUnG0118100 Rhododendron simsii HOM05D003265 ORTHO05D003819 7.5e-13 80.1 579 29.5
Actinidia05271 Actinidia chinensis HOM05D003265 ORTHO05D003819 1.3e-12 79.3 635 29.4
QL07p045275 Quercus lobata HOM05D003265 ORTHO05D003819 2.8e-12 78.2 609 26.6
Atru.chr8.2556 Acer truncatum HOM05D003265 ORTHO05D003819 1.8e-11 75.5 489 25.4
CiPaw.10G137500 Carya illinoinensis HOM05D003265 ORTHO05D003819 2.4e-11 75.1 384 27.1
COL.COLO4_27082 Corchorus olitorius HOM05D003265 ORTHO05D003819 2.4e-11 75.1 571 24.5
PSO384G1633 Papaver somniferum HOM05D003265 ORTHO05D003819 4.1e-11 74.3 717 25.5
Gohir.D01G205900 Gossypium hirsutum HOM05D003265 ORTHO05D003819 5.3e-11 73.9 437 28.6
CiPaw.01G276700 Carya illinoinensis HOM05D003265 ORTHO05D003819 3.5e-10 71.2 485 26.8
Dinv35709 Davidia involucrata HOM05D003265 ORTHO05D003819 3.5e-10 71.2 187 35.3
GSVIVG01025625001 Vitis vinifera HOM05D003265 ORTHO05D003819 4.5e-10 70.9 274 28.5
CSS0020316 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 1.0e-09 69.7 482 26.3
Gorai.002G250300 Gossypium raimondii HOM05D003265 ORTHO05D003819 1.7e-09 68.9 500 27.6
Thecc.05G053900 Theobroma cacao HOM05D003265 ORTHO05D003819 5.0e-09 67.4 613 25.1
TWI77G0315 Tripterygium wilfordii HOM05D003265 ORTHO05D003819 5.0e-09 67.4 173 32.9
Sed0003387 Sechium edule HOM05D003265 ORTHO05D003819 8.5e-09 66.6 290 27.9
TWI74G1096 Tripterygium wilfordii HOM05D003265 ORTHO05D003819 8.5e-09 66.6 350 27.1
MD07G1179700 Malus domestica HOM05D003265 ORTHO05D003819 2.5e-08 65.1 290 30.0
Psat6g070560 Pisum sativum HOM05D003265 ORTHO05D003819 4.2e-08 64.3 155 38.1
Actinidia13105 Actinidia chinensis HOM05D003265 ORTHO05D003819 5.5e-08 63.9 340 30.3
Gohir.A01G217200 Gossypium hirsutum HOM05D003265 ORTHO05D003819 9.4e-08 63.2 437 28.6
Ca_08825_v3 Cicer arietinum L. HOM05D003265 ORTHO05D003819 1.2e-07 62.8 240 30.0
Lalb_Chr20g0112961 Lupinus albus HOM05D003265 ORTHO05D003819 1.6e-07 62.4 210 32.4
MD04G1104400 Malus domestica HOM05D003265 ORTHO05D003819 1.6e-07 62.4 440 25.7
TPR.G30247 Trifolium pratense HOM05D003265 ORTHO05D003819 3.6e-07 61.2 309 31.7
TWI38G2066 Tripterygium wilfordii HOM05D003265 ORTHO05D003819 1.4e-06 59.3 471 25.5
FvH4_6g15330 Fragaria vesca HOM05D003265 ORTHO05D003819 1.8e-06 58.9 445 25.2
MD12G1124300 Malus domestica HOM05D003265 ORTHO05D003819 2.3e-06 58.5 327 26.3
Lalb_Chr19g0129491 Lupinus albus HOM05D003265 ORTHO05D003819 3.0e-06 58.2 119 31.9
Sed0014651 Sechium edule HOM05D003265 ORTHO05D003819 4.0e-06 57.8 238 28.6
CAN.G608.11 Capsicum annuum HOM05D003265 ORTHO05D003819 5.2e-06 57.4 308 27.3
Medtr1g066870 Medicago truncatula HOM05D003265 ORTHO05D003819 6.8e-06 57.0 369 29.5


User provided reference genes

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