Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007484 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D017715 1.5e-86 322.8 160 100.0
CSS0045262 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D017715 1.4e-84 316.2 160 98.8
CSS0006524 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D017715 2.4e-84 315.5 156 100.0
CSS0022990 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D017715 1.1e-57 226.9 156 76.9
CSS0001478 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D017715 4.1e-52 208.4 156 72.4
CSS0019124 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D017715 3.5e-51 205.3 156 71.2
CSS0012670 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 3.1e-47 192.2 156 64.1
Dinv20729 Davidia involucrata HOM05D000092 ORTHO05D000042 3.9e-18 95.5 185 39.5
Dinv20556 Davidia involucrata HOM05D000092 ORTHO05D000042 1.1e-17 94.0 182 39.0
Dinv20740 Davidia involucrata HOM05D000092 ORTHO05D000042 1.1e-17 94.0 182 39.0
CSS0029815 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 8.2e-16 87.8 178 37.6
CSS0050384 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 1.0e-13 80.9 178 37.6
Actinidia16423 Actinidia chinensis HOM05D000092 ORTHO05D000042 8.4e-13 77.8 179 34.1
CSS0024218 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 1.4e-12 77.0 176 36.9
CSS0037245 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 1.4e-12 77.0 179 36.3
Dinv03237 Davidia involucrata HOM05D000092 ORTHO05D000042 9.3e-12 74.3 198 34.3
Rhsim03G0020800 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.6e-11 73.6 152 34.9
Rhsim06G0161400 Rhododendron simsii HOM05D000092 ORTHO05D000042 6.1e-11 71.6 137 38.7
Dinv03240 Davidia involucrata HOM05D000092 ORTHO05D000042 1.0e-10 70.9 155 37.4
Dinv03242 Davidia involucrata HOM05D000092 ORTHO05D000042 3.9e-10 68.9 175 33.7
Rhsim06G0161600 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.9e-10 68.9 145 37.9
Rhsim06G0161900 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.9e-10 68.9 141 39.7
Dinv03245 Davidia involucrata HOM05D000092 ORTHO05D000042 6.7e-10 68.2 136 36.0
CSS0009386 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 8.7e-10 67.8 176 34.1
Rhsim03G0015900 Rhododendron simsii HOM05D000997 ORTHO05D000828 2.5e-09 66.2 179 34.1
CSS0006875 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 3.3e-09 65.9 154 32.5
RhsimUnG0106500 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.3e-09 65.9 142 33.1
Rhsim03G0014300 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.6e-08 63.5 149 32.2
Actinidia20282 Actinidia chinensis HOM05D000092 ORTHO05D000042 2.2e-08 63.2 175 30.9
Rhsim03G0016800 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.7e-08 62.4 142 33.1
Actinidia12451 Actinidia chinensis HOM05D000092 ORTHO05D000042 4.8e-08 62.0 174 31.0
Dinv18880 Davidia involucrata HOM05D000092 ORTHO05D000042 4.8e-08 62.0 107 41.1
vmacro07864 Vaccinium macrocarpon HOM05D000092 ORTHO05D017715 4.8e-08 62.0 163 33.1
vmacro09389 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 4.8e-08 62.0 151 31.8
Dinv05244 Davidia involucrata HOM05D000092 ORTHO05D000042 1.1e-07 60.8 101 43.6
vmacro07866 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 1.4e-07 60.5 150 37.3
Rhsim05G0218900 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.8e-07 60.1 176 31.2
RhsimUnG0106800 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.8e-07 60.1 141 31.9
vmacro12194 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 1.8e-07 60.1 156 33.3
CSS0020621 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 3.1e-07 59.3 142 35.2
Rhsim06G0161800 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.1e-07 59.3 136 36.0
Rhsim03G0017100 Rhododendron simsii HOM05D000092 ORTHO05D000042 4.1e-07 58.9 141 31.2
Rhsim03G0023800 Rhododendron simsii HOM05D000092 ORTHO05D000042 4.1e-07 58.9 150 30.7
CSS0034659 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 5.3e-07 58.5 144 34.0
RhsimUnG0150300 Rhododendron simsii HOM05D000092 ORTHO05D000042 5.3e-07 58.5 141 32.6
Dinv05255 Davidia involucrata HOM05D000092 ORTHO05D000042 6.9e-07 58.2 186 32.8
Rhsim03G0035100 Rhododendron simsii HOM05D000092 ORTHO05D000042 6.9e-07 58.2 180 28.9
Rhsim05G0218300 Rhododendron simsii HOM05D000092 ORTHO05D000042 6.9e-07 58.2 158 28.5
vmacro09387 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 9.0e-07 57.8 167 31.7
Dinv03248 Davidia involucrata HOM05D000092 ORTHO05D000042 1.2e-06 57.4 93 43.0
Rhsim05G0217600 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.2e-06 57.4 100 41.0
Dinv05441 Davidia involucrata HOM05D000092 ORTHO05D000042 2.0e-06 56.6 141 34.8
Actinidia36927 Actinidia chinensis HOM05D000092 ORTHO05D000042 3.4e-06 55.8 176 27.8
Glyma.13G260600 Glycine max HOM05D000092 ORTHO05D000042 7.7e-06 54.7 134 33.6
Rhsim02G0094400 Rhododendron simsii HOM05D000092 ORTHO05D000042 7.7e-06 54.7 154 31.2
Rhsim03G0040200 Rhododendron simsii HOM05D000092 ORTHO05D000042 7.7e-06 54.7 179 29.6


User provided reference genes

Program Settings