Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007483 Camellia sinensis var. sinensis HOM05D012232 ORTHO05D013262 3.4e-40 167.9 88 100.0
CSS0029563 Camellia sinensis var. sinensis HOM05D012232 ORTHO05D010552 1.4e-17 92.8 83 63.9
CSS0045732 Camellia sinensis var. sinensis HOM05D012232 ORTHO05D010552 1.4e-17 92.8 83 63.9
TAR624G1413 Trochodendron aralioides HOM05D000001 ORTHO05D000003 8.8e-12 73.6 86 50.0
PGSC0003DMG400026633 Solanum tuberosum HOM05D012232 ORTHO05D013262 2.0e-11 72.4 83 48.2
Lsat_1_v5_gn_7_23461 Lactuca sativa HOM05D012232 ORTHO05D010552 7.4e-11 70.5 84 45.2
Potri.011G063750 Populus trichocarpa HOM05D012232 ORTHO05D013262 1.1e-09 66.6 80 45.0
Thecc.06G174800 Theobroma cacao HOM05D012232 ORTHO05D013262 1.1e-09 66.6 81 46.9
Thecc.10G087500 Theobroma cacao HOM05D012232 ORTHO05D013262 3.1e-09 65.1 81 45.7
Manes.16G036050 Manihot esculenta HOM05D012232 ORTHO05D013262 4.1e-09 64.7 89 46.1
Gohir.D05G159300 Gossypium hirsutum HOM05D012232 ORTHO05D013262 7.7e-08 60.5 81 45.7
Gohir.A05G156400 Gossypium hirsutum HOM05D012232 ORTHO05D013262 1.0e-07 60.1 81 45.7
Manes.17G053400 Manihot esculenta HOM05D012232 ORTHO05D013262 1.0e-07 60.1 88 44.3
Potri.001G376200 Populus trichocarpa HOM05D008879 ORTHO05D010552 4.2e-06 54.7 80 43.8
Haze_06271 Corylus avellana HOM05D019009 ORTHO05D013262 5.5e-06 54.3 80 45.0


User provided reference genes

Program Settings