Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007477 Camellia sinensis var. sinensis HOM05D006531 ORTHO05D007905 3.4e-76 288.1 134 100.0
Actinidia35619 Actinidia chinensis HOM05D006531 ORTHO05D007905 3.0e-56 221.9 134 76.1
vmacro17801 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 1.2e-55 219.9 134 75.4
Rhsim08G0121800 Rhododendron simsii HOM05D006531 ORTHO05D007905 9.8e-55 216.9 134 73.9
GSVIVG01018883001 Vitis vinifera HOM05D006531 ORTHO05D007905 5.5e-50 201.1 134 67.9
Dinv05610 Davidia involucrata HOM05D006531 ORTHO05D007905 7.2e-50 200.7 134 67.9
Lj2C458T7 Lonicera japonica HOM05D006531 ORTHO05D007905 2.1e-49 199.1 134 70.1
Atru.BG.101.p Acer truncatum HOM05D006531 ORTHO05D007905 1.5e-47 193.0 134 67.2
Atru.chr3.665 Acer truncatum HOM05D006531 ORTHO05D007905 1.5e-47 193.0 134 67.2
Ciclev10025250m.g Citrus clementina HOM05D006531 ORTHO05D007905 5.7e-47 191.0 134 64.9
TAR628G0973 Trochodendron aralioides HOM05D006531 ORTHO05D007905 4.9e-46 188.0 135 65.2
Hma1.2p1_3019F.1_g331750 Hydrangea macrophylla HOM05D006531 ORTHO05D007905 1.2e-44 183.3 134 64.9
PGR102G2490 Punica granatum HOM05D006531 ORTHO05D007905 1.6e-44 183.0 134 63.4
Thecc.01G028000 Theobroma cacao HOM05D006531 ORTHO05D007905 1.6e-44 183.0 134 63.4
Gohir.D11G188400 Gossypium hirsutum HOM05D006531 ORTHO05D007905 2.0e-44 182.6 134 62.7
Prupe.7G159100 Prunus persica HOM05D006531 ORTHO05D007905 3.5e-44 181.8 134 61.9
CANSAT21G1927 Cannabis sativa HOM05D006531 ORTHO05D007905 4.5e-44 181.4 134 61.9
Gorai.007G200500 Gossypium raimondii HOM05D006531 ORTHO05D007905 1.0e-43 180.3 134 61.9
Haze_03846 Corylus avellana HOM05D006531 ORTHO05D007905 1.3e-43 179.9 127 63.0
Sabra07G0016900 Salix brachista HOM05D006531 ORTHO05D007905 1.3e-43 179.9 134 61.2
Gohir.A11G181766 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.7e-43 179.5 134 61.2
Gohir.D11G322533 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.7e-43 179.5 134 61.2
COL.COLO4_22012 Corchorus olitorius HOM05D006531 ORTHO05D007905 2.9e-43 178.7 134 62.7
Duzib187G1823 Durio zibethinus HOM05D006531 ORTHO05D007905 5.0e-43 177.9 134 62.7
MBI14_g29302_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 5.0e-43 177.9 135 60.0
Oeu056763.1 Olea europaea HOM05D006531 ORTHO05D007905 5.0e-43 177.9 134 61.9
MBI16_g36847_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 1.1e-42 176.8 135 59.3
TWI53G1729 Tripterygium wilfordii HOM05D006531 ORTHO05D007905 1.9e-42 176.0 134 63.4
CiPaw.07G051400 Carya illinoinensis HOM05D006531 ORTHO05D007905 2.5e-42 175.6 127 62.2
RcHm_v2.0_Chr2g0100811 Rosa chinensis HOM05D006531 ORTHO05D007905 3.3e-42 175.3 134 60.4
FvH4_1g12740 Fragaria vesca HOM05D006531 ORTHO05D007905 4.2e-42 174.9 134 59.7
FAN19G3073 Fragaria x ananassa HOM05D006531 ORTHO05D007905 4.2e-42 174.9 134 59.7
PSO675G3692 Papaver somniferum HOM05D006531 ORTHO05D007905 4.2e-42 174.9 135 60.7
FAN23G2909 Fragaria x ananassa HOM05D006531 ORTHO05D007905 7.2e-42 174.1 134 59.0
Lalb_Chr16g0391021 Lupinus albus HOM05D006531 ORTHO05D007905 7.2e-42 174.1 134 56.7
Potri.007G019733 Populus trichocarpa HOM05D006531 ORTHO05D007905 7.2e-42 174.1 133 60.2
Potri.007G019800 Populus trichocarpa HOM05D006531 ORTHO05D007905 7.2e-42 174.1 133 60.2
PSO541G5850 Papaver somniferum HOM05D006531 ORTHO05D007905 2.1e-41 172.6 135 60.0
MSTRG.23258 Avicennia marina HOM05D006531 ORTHO05D007905 2.8e-41 172.2 134 58.2
FAN28G0612 Fragaria x ananassa HOM05D006531 ORTHO05D007905 2.8e-41 172.2 134 58.2
VMungo0251G0240 Vigna mungo HOM05D006531 ORTHO05D007905 2.8e-41 172.2 134 57.5
Psat4g096120 Pisum sativum HOM05D006531 ORTHO05D007905 8.0e-41 170.6 134 59.7
Manes.02G098000 Manihot esculenta HOM05D006531 ORTHO05D007905 1.0e-40 170.2 134 58.2
FAN26G0669 Fragaria x ananassa HOM05D006531 ORTHO05D007905 2.3e-40 169.1 134 57.5
Migut.H02514 Erythranthe guttata HOM05D006531 ORTHO05D007905 5.2e-40 167.9 134 58.2
MD15G1254500 Malus domestica HOM05D006531 ORTHO05D007905 6.8e-40 167.5 134 59.0
Sed0004808 Sechium edule HOM05D006531 ORTHO05D007905 1.5e-39 166.4 134 57.5
SGA_v2.0_scaffold12G06335 Striga asiatica HOM05D006531 ORTHO05D007905 1.5e-39 166.4 134 58.2
Cpa.g.sc89.75 Carica papaya HOM05D006531 ORTHO05D007905 2.0e-39 166.0 134 57.5
Hund14004 Selenicereus undatus HOM05D006531 ORTHO05D007905 3.4e-39 165.2 132 58.3
TPR.G21544 Trifolium pratense HOM05D006531 ORTHO05D007905 3.4e-39 165.2 134 57.5
CAN.G753.1 Capsicum annuum HOM05D006531 ORTHO05D007905 4.4e-39 164.9 134 56.0
MELO3C007866.2 Cucumis melo HOM05D006531 ORTHO05D007905 4.4e-39 164.9 134 58.2
Lj4g0004916 Lotus japonicus HOM05D006531 ORTHO05D007905 5.7e-39 164.5 134 56.7
Phvul.003G257232 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 5.7e-39 164.5 134 56.0
CsaV3_6G046680 Cucumis sativus L. HOM05D006531 ORTHO05D007905 9.8e-39 163.7 134 57.5
QL06p035210 Quercus lobata HOM05D006531 ORTHO05D007905 9.8e-39 163.7 156 49.4
Sc07g0000880 Simmondsia chinensis HOM05D006531 ORTHO05D007905 9.8e-39 163.7 132 59.8
Cc07_g10020 Coffea canephora HOM05D006531 ORTHO05D007905 1.3e-38 163.3 134 61.2
SalBow8G4669 Salvia bowleyana HOM05D006531 ORTHO05D007905 1.7e-38 162.9 131 59.5
Glyma.02G053000 Glycine max HOM05D006531 ORTHO05D007905 2.2e-38 162.5 134 55.2
Solyc03g033720.4 Solanum lycopersicum HOM05D006531 ORTHO05D007905 2.2e-38 162.5 134 56.0
PGSC0003DMG400022568 Solanum tuberosum HOM05D006531 ORTHO05D007905 2.2e-38 162.5 134 56.0
Sopen03g006510 Solanum pennellii HOM05D006531 ORTHO05D007905 2.9e-38 162.2 134 55.2
EL10As8g23896 Beta vulgaris HOM05D006531 ORTHO05D007905 6.4e-38 161.0 128 57.8
DCAR_001553 Daucus carota HOM05D006531 ORTHO05D007905 1.8e-37 159.5 134 56.0
Carub.0005s0479 Capsella rubella HOM05D006531 ORTHO05D007905 2.4e-37 159.1 136 57.4
ECA232G0312 Erigeron canadensis HOM05D006531 ORTHO05D007905 7.0e-37 157.5 139 56.8
Eucgr.J02379 Eucalyptus grandis HOM05D006531 ORTHO05D007905 7.0e-37 157.5 134 53.0
AUR62007614 Chenopodium quinoa HOM05D006531 ORTHO05D007905 9.2e-37 157.1 128 57.8
Ah.03g141200 Amaranthus hybridus HOM05D006531 ORTHO05D007905 2.0e-36 156.0 128 57.8
AUR62004101 Chenopodium quinoa HOM05D006531 ORTHO05D007905 2.0e-36 156.0 128 57.0
Lsat_1_v5_gn_4_151921 Lactuca sativa HOM05D006531 ORTHO05D007905 7.8e-36 154.1 136 55.9
Thhalv10003992m.g Eutrema salsugineum HOM05D006531 ORTHO05D007905 1.3e-35 153.3 136 54.4
Medtr8g076860 Medicago truncatula HOM05D006531 ORTHO05D007905 1.3e-35 153.3 134 53.7
unitig_0.g471 Utricularia gibba HOM05D006531 ORTHO05D007905 2.3e-35 152.5 134 54.5
Ca_22340_v3 Cicer arietinum L. HOM05D006531 ORTHO05D007905 2.9e-35 152.1 134 53.7
arahy.Tifrunner.gnm1.ann1.P54VLQ Arachis hypogaea HOM05D006531 ORTHO05D007905 3.9e-35 151.8 134 53.7
Aqoxy6G01185 Aquilegia oxysepala HOM05D006531 ORTHO05D007905 8.6e-35 150.6 135 51.9
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 1.5e-34 149.8 167 46.1
HanXRQChr09g0261281 Helianthus annuus HOM05D006531 ORTHO05D007905 1.9e-34 149.4 135 57.0
AT3G26750 Arabidopsis thaliana HOM05D006531 ORTHO05D007905 5.6e-34 147.9 136 52.9
arahy.Tifrunner.gnm1.ann1.WDDE23 Arachis hypogaea HOM05D006531 ORTHO05D007905 7.3e-34 147.5 134 53.0
BcaC06g31044 Brassica carinata HOM05D006531 ORTHO05D007905 4.7e-33 144.8 136 52.9
Nitab4.5_0001289g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 4.7e-33 144.8 134 52.2
Nitab4.5_0011360g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 6.2e-33 144.4 134 54.5
BolC7t44097H Brassica oleracea HOM05D006531 ORTHO05D007905 1.4e-32 143.3 136 51.5
Sp2g15880 Schrenkiella parvula HOM05D006531 ORTHO05D007905 1.4e-32 143.3 136 51.5
AL5G15610 Arabidopsis lyrata HOM05D006531 ORTHO05D007905 2.3e-32 142.5 136 52.2
BcaC06g33892 Brassica carinata HOM05D006531 ORTHO05D007905 2.3e-32 142.5 136 51.5
C07p35780 Brassica napus HOM05D006531 ORTHO05D007905 2.3e-32 142.5 136 51.5
A06p41760 Brassica napus HOM05D006531 ORTHO05D007905 5.2e-32 141.4 136 50.7
BraA06t27096Z Brassica rapa HOM05D006531 ORTHO05D007905 5.2e-32 141.4 136 50.7
CARHR147820 Cardamine hirsuta HOM05D006531 ORTHO05D007905 5.2e-32 141.4 137 51.8
Aa31LG2G5790 Aethionema arabicum HOM05D006531 ORTHO05D007905 7.5e-31 137.5 135 49.6
CDE04G2389 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 7.5e-31 137.5 137 50.4
THA.LOC104819768 Tarenaya hassleriana HOM05D006531 ORTHO05D007905 7.5e-31 137.5 135 48.1
Os02g0130900 Oryza sativa ssp. japonica HOM05D006531 ORTHO05D007905 3.7e-30 135.2 134 49.3
ATR0585G072 Amborella trichopoda HOM05D006531 ORTHO05D007905 6.0e-28 127.9 131 44.3
HPP92_011628 Vanilla planifolia HOM05D006531 ORTHO05D007905 3.3e-26 122.1 108 53.7
Carub.0006s2991 Capsella rubella HOM05D006531 ORTHO05D007905 1.2e-25 120.2 120 51.7
vmacro23089 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 3.4e-23 112.1 72 73.6
Peaxi162Scf00010g00816 Petunia axillaris HOM05D006531 ORTHO05D007905 1.9e-21 106.3 134 40.3
Zm00001eb209020 Zea mays HOM05D006531 ORTHO05D007905 4.1e-21 105.1 99 52.5
Mapoly0011s0081 Marchantia polymorpha HOM05D006531 ORTHO05D007905 1.9e-18 96.3 116 38.8
TAR376G0004 Trochodendron aralioides HOM05D006531 ORTHO05D007905 3.3e-18 95.5 75 61.3
Sc07g0000850 Simmondsia chinensis HOM05D006531 ORTHO05D007905 2.3e-16 89.4 73 63.0
Zm00001eb231290 Zea mays HOM05D006531 ORTHO05D007905 3.4e-15 85.5 122 41.0
Pp3c2_6980 Physcomitrium patens HOM05D006531 ORTHO05D007905 3.7e-14 82.0 114 37.7
Nn5g29702 Nelumbo nucifera HOM05D006531 ORTHO05D007905 3.9e-11 72.0 96 41.7
AagrBONN_evm.TU.Sc2ySwM_368.1148 Anthoceros agrestis HOM05D006531 ORTHO05D007905 7.3e-10 67.8 92 33.7
MSTRG.2488 Avicennia marina HOM05D006531 ORTHO05D007905 2.0e-07 59.7 62 48.4
RcHm_v2.0_Chr4g0390451 Rosa chinensis HOM05D006531 ORTHO05D007905 5.8e-07 58.2 43 67.4


User provided reference genes

Program Settings