Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007395 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 2.6e-58 228.4 109 100.0
Dinv30243 Davidia involucrata HOM05D006214 ORTHO05D007723 3.2e-32 141.7 80 81.2
GSVIVG01035713001 Vitis vinifera HOM05D006214 ORTHO05D007723 1.6e-31 139.4 80 77.5
Rhsim02G0184100 Rhododendron simsii HOM05D006214 ORTHO05D007723 6.1e-31 137.5 80 76.2
Nitab4.5_0002393g0090 Nicotiana tabacum HOM05D006214 ORTHO05D007723 1.4e-30 136.3 80 76.2
DCAR_001036 Daucus carota HOM05D006214 ORTHO05D007723 5.2e-30 134.4 80 76.2
Nn8g39214 Nelumbo nucifera HOM05D006214 ORTHO05D007723 5.2e-30 134.4 80 73.8
Thecc.09G038200 Theobroma cacao HOM05D006214 ORTHO05D007723 1.2e-29 133.3 80 73.8
Hma1.2p1_0003F.1_g003500 Hydrangea macrophylla HOM05D006214 ORTHO05D007723 1.5e-29 132.9 80 73.8
CSS0015630 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 9.8e-29 130.2 80 72.5
CSS0049547 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 9.8e-29 130.2 80 72.5
Nitab4.5_0000250g0190 Nicotiana tabacum HOM05D006214 ORTHO05D007723 1.7e-28 129.4 80 72.5
Oeu011261.1 Olea europaea HOM05D006214 ORTHO05D007723 1.7e-28 129.4 80 71.2
COL.COLO4_18710 Corchorus olitorius HOM05D006214 ORTHO05D007723 2.2e-28 129.0 81 70.4
Manes.03G064300 Manihot esculenta HOM05D006214 ORTHO05D007723 2.2e-28 129.0 78 73.1
TWI34G1412 Tripterygium wilfordii HOM05D006214 ORTHO05D007723 2.8e-28 128.6 79 72.2
Migut.A00249 Erythranthe guttata HOM05D006214 ORTHO05D007723 3.7e-28 128.3 80 71.2
Cpa.g.sc205.8 Carica papaya HOM05D006214 ORTHO05D007723 4.8e-28 127.9 80 72.5
Duzib150G0825 Durio zibethinus HOM05D006214 ORTHO05D007723 6.3e-28 127.5 80 70.0
Eucgr.C02883 Eucalyptus grandis HOM05D006214 ORTHO05D007723 8.3e-28 127.1 80 71.2
Eucgr.L03669 Eucalyptus grandis HOM05D006214 ORTHO05D007723 8.3e-28 127.1 80 71.2
Sc06g0000690 Simmondsia chinensis HOM05D006214 ORTHO05D007723 8.3e-28 127.1 80 72.5
ECA233G3302 Erigeron canadensis HOM05D006214 ORTHO05D007723 1.1e-27 126.7 80 68.8
Solyc08g068070.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 1.1e-27 126.7 80 71.2
PGSC0003DMG400014492 Solanum tuberosum HOM05D006214 ORTHO05D007723 1.8e-27 125.9 80 71.2
Aqoxy7G01701 Aquilegia oxysepala HOM05D006214 ORTHO05D007723 2.4e-27 125.6 80 71.2
QL12p026136 Quercus lobata HOM05D006214 ORTHO05D007723 3.1e-27 125.2 75 74.7
Ciclev10009715m.g Citrus clementina HOM05D006214 ORTHO05D007723 4.1e-27 124.8 80 71.2
Potri.006G244300 Populus trichocarpa HOM05D006214 ORTHO05D007723 4.1e-27 124.8 77 72.7
Oeu014655.1 Olea europaea HOM05D006214 ORTHO05D007723 5.4e-27 124.4 80 68.8
PSO782G3114 Papaver somniferum HOM05D006214 ORTHO05D007723 7.0e-27 124.0 79 72.2
Lsat_1_v5_gn_6_11341 Lactuca sativa HOM05D006214 ORTHO05D007723 9.1e-27 123.6 81 67.9
Medtr1g008700 Medicago truncatula HOM05D006214 ORTHO05D007723 9.1e-27 123.6 70 78.6
PSO063G0005 Papaver somniferum HOM05D006214 ORTHO05D007723 9.1e-27 123.6 81 70.4
Actinidia31216 Actinidia chinensis HOM05D006214 ORTHO05D007723 1.6e-26 122.9 80 68.8
Sopen08g021960 Solanum pennellii HOM05D006214 ORTHO05D007723 1.6e-26 122.9 82 69.5
Lalb_Chr22g0361001 Lupinus albus HOM05D006214 ORTHO05D007723 5.9e-26 120.9 67 79.1
PGR044G2495 Punica granatum HOM05D006214 ORTHO05D007723 5.9e-26 120.9 70 75.7
Cc08_g08530 Coffea canephora HOM05D006214 ORTHO05D007723 7.7e-26 120.6 70 74.3
HanXRQChr07g0192221 Helianthus annuus HOM05D006214 ORTHO05D007723 1.0e-25 120.2 81 66.7
AUR62032401 Chenopodium quinoa HOM05D006214 ORTHO05D007723 1.3e-25 119.8 79 68.4
Sed0020806 Sechium edule HOM05D006214 ORTHO05D007723 1.3e-25 119.8 80 66.2
CiPaw.08G022500 Carya illinoinensis HOM05D006214 ORTHO05D007723 1.7e-25 119.4 75 72.0
Manes.16G067000 Manihot esculenta HOM05D006214 ORTHO05D007723 2.3e-25 119.0 78 66.7
Peaxi162Scf00105g00059 Petunia axillaris HOM05D006214 ORTHO05D007723 3.8e-25 118.2 73 72.6
CANSAT25G2048 Cannabis sativa HOM05D006214 ORTHO05D007723 5.0e-25 117.9 76 72.4
Gorai.013G218300 Gossypium raimondii HOM05D006214 ORTHO05D007723 5.0e-25 117.9 79 63.3
TAR624G0931 Trochodendron aralioides HOM05D006214 ORTHO05D007723 5.0e-25 117.9 74 74.3
Lj8A606G25 Lonicera japonica HOM05D006214 ORTHO05D007723 6.5e-25 117.5 65 80.0
Actinidia13304 Actinidia chinensis HOM05D006214 ORTHO05D007723 8.6e-25 117.1 63 81.0
Ah.12g061040 Amaranthus hybridus HOM05D006214 ORTHO05D007723 8.6e-25 117.1 81 64.2
MELO3C011160.2 Cucumis melo HOM05D006214 ORTHO05D007723 8.6e-25 117.1 80 65.0
Aa31LG2G16930 Aethionema arabicum HOM05D006214 ORTHO05D007723 1.5e-24 116.3 67 79.1
AUR62024819 Chenopodium quinoa HOM05D006214 ORTHO05D007723 1.5e-24 116.3 78 67.9
Duzib168G0494 Durio zibethinus HOM05D006214 ORTHO05D007723 1.5e-24 116.3 74 68.9
Hund25645 Selenicereus undatus HOM05D006214 ORTHO05D007723 1.5e-24 116.3 80 68.8
Thhalv10026389m.g Eutrema salsugineum HOM05D006214 ORTHO05D007723 2.5e-24 115.5 67 76.1
Gorai.009G052700 Gossypium raimondii HOM05D006214 ORTHO05D007723 2.5e-24 115.5 70 72.9
Prupe.1G454300 Prunus persica HOM05D006214 ORTHO05D007723 3.3e-24 115.2 65 76.9
ATR1120G189 Amborella trichopoda HOM05D006214 ORTHO05D007723 4.2e-24 114.8 68 73.5
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 4.2e-24 114.8 67 74.6
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 4.2e-24 114.8 67 74.6
Gohir.D13G192400 Gossypium hirsutum HOM05D006214 ORTHO05D007723 4.2e-24 114.8 79 62.0
THA.LOC104803814 Tarenaya hassleriana HOM05D006214 ORTHO05D007723 4.2e-24 114.8 67 76.1
EL10Ac2g02522 Beta vulgaris HOM05D006214 ORTHO05D007723 5.5e-24 114.4 81 66.7
CARHR240670 Cardamine hirsuta HOM05D006214 ORTHO05D007723 5.5e-24 114.4 67 76.1
CiPaw.07G208400 Carya illinoinensis HOM05D006214 ORTHO05D007723 7.2e-24 114.0 67 73.1
Sp7g30450 Schrenkiella parvula HOM05D006214 ORTHO05D007723 7.2e-24 114.0 67 74.6
AT4G32690 Arabidopsis thaliana HOM05D006214 ORTHO05D007723 9.5e-24 113.6 67 74.6
SGA_v2.0_scaffold27G11530 Striga asiatica HOM05D006214 ORTHO05D007723 1.2e-23 113.2 81 63.0
BolC1t00620H Brassica oleracea HOM05D006214 ORTHO05D007723 1.6e-23 112.8 66 74.2
CsaV3_2G031100 Cucumis sativus L. HOM05D006214 ORTHO05D007723 2.1e-23 112.5 80 63.8
AL7G19050 Arabidopsis lyrata HOM05D006214 ORTHO05D007723 2.8e-23 112.1 67 73.1
arahy.Tifrunner.gnm1.ann1.72Y1Y4 Arachis hypogaea HOM05D006214 ORTHO05D007723 2.8e-23 112.1 61 82.0
Ca_12821_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 3.6e-23 111.7 64 76.6
Ca_12822_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 3.6e-23 111.7 64 76.6
Gohir.D05G051050 Gossypium hirsutum HOM05D006214 ORTHO05D007723 3.6e-23 111.7 70 70.0
Psat6g005800 Pisum sativum HOM05D006214 ORTHO05D007723 3.6e-23 111.7 64 78.1
VMungo0647G2273 Vigna mungo HOM05D006214 ORTHO05D007723 3.6e-23 111.7 64 76.6
Lj1g0018927 Lotus japonicus HOM05D006214 ORTHO05D007723 6.1e-23 110.9 70 70.0
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 8.0e-23 110.5 64 75.0
Carub.0007s0784 Capsella rubella HOM05D006214 ORTHO05D007723 8.0e-23 110.5 67 73.1
RcHm_v2.0_Chr6g0305591 Rosa chinensis HOM05D006214 ORTHO05D007723 8.0e-23 110.5 70 68.6
Solyc08g068090.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 8.0e-23 110.5 68 72.1
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 1.0e-22 110.2 67 71.6
FAN15G3028 Fragaria x ananassa HOM05D006214 ORTHO05D007723 1.0e-22 110.2 66 71.2
Psat0s1478g0160 Pisum sativum HOM05D006214 ORTHO05D007723 1.4e-22 109.8 66 72.7
arahy.Tifrunner.gnm1.ann1.8TR5WT Arachis hypogaea HOM05D006214 ORTHO05D007723 3.0e-22 108.6 61 78.7
Glyma.14G140400 Glycine max HOM05D006214 ORTHO05D007723 3.0e-22 108.6 61 77.0
Cfa013332 Carpinus fangiana HOM05D006214 ORTHO05D007723 4.0e-22 108.2 61 77.0
Haze_21823 Corylus avellana HOM05D006214 ORTHO05D007723 5.2e-22 107.8 61 77.0
TPR.G12079 Trifolium pratense HOM05D006214 ORTHO05D007723 5.2e-22 107.8 64 75.0
Phvul.001G060001 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 6.8e-22 107.5 65 75.4
Sopen08g021970 Solanum pennellii HOM05D006214 ORTHO05D007723 6.8e-22 107.5 68 70.6
VMungo1309G2769 Vigna mungo HOM05D006214 ORTHO05D007723 8.9e-22 107.1 73 64.4
Lalb_Chr08g0243361 Lupinus albus HOM05D006214 ORTHO05D007723 1.2e-21 106.7 67 70.1
Phvul.009G104900 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 1.2e-21 106.7 78 59.0
HPP92_005176 Vanilla planifolia HOM05D006214 ORTHO05D007723 1.2e-21 106.7 70 67.1
Potri.018G036200 Populus trichocarpa HOM05D006214 ORTHO05D007723 1.5e-21 106.3 76 64.5
Glyma.04G079200 Glycine max HOM05D006214 ORTHO05D007723 3.4e-21 105.1 73 64.4
Lj1g0018426 Lotus japonicus HOM05D006214 ORTHO05D007723 5.7e-21 104.4 64 70.3
Medtr3g109420 Medicago truncatula HOM05D006214 ORTHO05D007723 5.7e-21 104.4 66 69.7
Zm00001eb386050 Zea mays HOM05D006214 ORTHO05D007723 9.8e-21 103.6 62 72.6
SEGI_02532 Sequoiadendron giganteum HOM05D006214 ORTHO05D007723 2.2e-20 102.4 67 65.7
Os06g0591600 Oryza sativa ssp. japonica HOM05D006214 ORTHO05D007723 3.7e-20 101.7 68 66.2
MD15G1099500 Malus domestica HOM05D006214 ORTHO05D007723 1.4e-19 99.8 54 79.6
Ca_15627_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 4.1e-19 98.2 66 65.2
TPR.G1342 Trifolium pratense HOM05D006214 ORTHO05D007723 7.0e-19 97.4 66 63.6
FAN20G2536 Fragaria x ananassa HOM05D006214 ORTHO05D007723 1.2e-18 96.7 60 68.3
AagrBONN_evm.TU.Sc2ySwM_368.1910 Anthoceros agrestis HOM05D006214 ORTHO05D007723 2.7e-18 95.5 67 62.7
FvH4_2g36290 Fragaria vesca HOM05D006214 ORTHO05D007723 2.7e-18 95.5 60 66.7
FAN27G2409 Fragaria x ananassa HOM05D006214 ORTHO05D007723 2.7e-18 95.5 60 66.7
SMO164G0258 Selaginella moellendorffii HOM05D006214 ORTHO05D007723 1.0e-17 93.6 68 57.4
Atru.chr7.2182 Acer truncatum HOM05D006214 ORTHO05D007723 1.3e-17 93.2 51 74.5
Atru.chr7.2299 Acer truncatum HOM05D006214 ORTHO05D007723 1.3e-17 93.2 51 74.5
CAN.G886.7 Capsicum annuum HOM05D006214 ORTHO05D007723 3.3e-16 88.6 57 68.4
Pp3c1_3380 Physcomitrium patens HOM05D006214 ORTHO05D007723 2.8e-15 85.5 64 59.4
Pp3c6_250 Physcomitrium patens HOM05D006214 ORTHO05D007723 6.1e-15 84.3 69 52.2
arahy.Tifrunner.gnm1.ann1.LJ0T63 Arachis hypogaea HOM05D006214 ORTHO05D007723 4.0e-14 81.6 58 62.1
Glyma.06G080700 Glycine max HOM05D006214 ORTHO05D007723 7.0e-11 70.9 63 47.6
MBI04_g08934_MAGBIO Magnolia biondii HOM05D006214 ORTHO05D003073 3.5e-10 68.6 79 46.8
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 6.0e-10 67.8 47 61.7
Sabra06G0191200 Salix brachista HOM05D006214 ORTHO05D007723 3.3e-08 62.0 77 44.2
arahy.Tifrunner.gnm1.ann1.YGZX15 Arachis hypogaea HOM05D000254 ORTHO05D000165 4.3e-08 61.6 39 64.1
C01p47490 Brassica napus HOM05D006214 ORTHO05D007723 2.1e-07 59.3 32 71.9
BolC1t04720H Brassica oleracea HOM05D006214 ORTHO05D007723 2.1e-07 59.3 32 71.9


User provided reference genes

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