Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007371 Camellia sinensis var. sinensis HOM05D004005 ORTHO05D004876 8.8e-96 353.6 177 100.0
CSS0032478 Camellia sinensis var. sinensis HOM05D004005 ORTHO05D004876 3.4e-95 351.7 176 99.4
Actinidia38657 Actinidia chinensis HOM05D004005 ORTHO05D004876 4.1e-77 291.6 176 83.5
Actinidia33309 Actinidia chinensis HOM05D004005 ORTHO05D004876 2.7e-76 288.9 176 83.0
Dinv41324 Davidia involucrata HOM05D004005 ORTHO05D004876 9.5e-74 280.4 176 79.0
Rhsim03G0260700 Rhododendron simsii HOM05D004005 ORTHO05D004876 2.1e-73 279.3 176 79.0
Rhsim03G0261200 Rhododendron simsii HOM05D004005 ORTHO05D004876 2.1e-73 279.3 176 79.0
vmacro06047 Vaccinium macrocarpon HOM05D004005 ORTHO05D004876 4.9e-70 268.1 184 74.5
CSS0035914 Camellia sinensis var. sinensis HOM05D004005 ORTHO05D004876 6.4e-70 267.7 176 76.1
CSS0024178 Camellia sinensis var. sinensis HOM05D004005 ORTHO05D004876 2.4e-69 265.8 176 75.6
Hma1.2p1_0325F.1_g126020 Hydrangea macrophylla HOM05D004005 ORTHO05D004876 5.0e-67 258.1 181 72.4
Hma1.2p1_0028F.1_g017890 Hydrangea macrophylla HOM05D004005 ORTHO05D004876 8.6e-67 257.3 176 73.3
Lj9A725G34 Lonicera japonica HOM05D004005 ORTHO05D004876 5.2e-64 248.1 176 70.5
Cc09_g08370 Coffea canephora HOM05D004005 ORTHO05D004876 1.1e-61 240.4 176 67.6
Oeu024901.3 Olea europaea HOM05D004005 ORTHO05D004876 1.4e-61 240.0 176 63.6
CSS0018523 Camellia sinensis var. sinensis HOM05D004005 ORTHO05D004876 1.2e-60 236.9 176 72.7
Cc06_g14320 Coffea canephora HOM05D004005 ORTHO05D004876 2.1e-60 236.1 176 66.5
MD13G1275200 Malus domestica HOM05D004005 ORTHO05D004876 4.6e-60 235.0 176 67.0
QL02p094609 Quercus lobata HOM05D004005 ORTHO05D004876 2.3e-59 232.6 176 68.8
Prupe.1G100000 Prunus persica HOM05D004005 ORTHO05D004876 3.0e-59 232.3 179 69.3
Haze_21258 Corylus avellana HOM05D004005 ORTHO05D004876 5.1e-59 231.5 176 67.0
Migut.K00290 Erythranthe guttata HOM05D004005 ORTHO05D004876 5.1e-59 231.5 176 63.1
PGSC0003DMG400011163 Solanum tuberosum HOM05D004005 ORTHO05D004876 1.1e-58 230.3 176 63.1
PGR102G1327 Punica granatum HOM05D004005 ORTHO05D004876 3.3e-58 228.8 177 66.1
Peaxi162Scf00038g00320 Petunia axillaris HOM05D004005 ORTHO05D004876 5.6e-58 228.0 176 63.1
Solyc07g006160.3 Solanum lycopersicum HOM05D004005 ORTHO05D004876 7.3e-58 227.6 176 60.8
MD16G1260700 Malus domestica HOM05D004005 ORTHO05D004876 9.5e-58 227.3 176 67.0
TWI63G1233 Tripterygium wilfordii HOM05D004005 ORTHO05D004876 1.2e-57 226.9 178 66.3
FAN22G1768 Fragaria x ananassa HOM05D004005 ORTHO05D004876 1.6e-57 226.5 177 63.8
Sopen07g002270 Solanum pennellii HOM05D004005 ORTHO05D004876 1.6e-57 226.5 176 60.8
CAN.G1190.5 Capsicum annuum HOM05D004005 ORTHO05D004876 2.1e-57 226.1 176 61.9
MSTRG.26250 Avicennia marina HOM05D004005 ORTHO05D004876 2.8e-57 225.7 176 61.9
COL.COLO4_10070 Corchorus olitorius HOM05D004005 ORTHO05D004876 3.6e-57 225.3 177 66.1
Nitab4.5_0003269g0020 Nicotiana tabacum HOM05D004005 ORTHO05D004876 4.7e-57 224.9 176 62.5
FvH4_4g08720 Fragaria vesca HOM05D004005 ORTHO05D004876 8.1e-57 224.2 177 63.8
FAN12G2564 Fragaria x ananassa HOM05D004005 ORTHO05D004876 8.1e-57 224.2 177 63.8
FAN12G2633 Fragaria x ananassa HOM05D004005 ORTHO05D004876 8.1e-57 224.2 177 63.8
GSVIVG01023713001 Vitis vinifera HOM05D004005 ORTHO05D004876 8.1e-57 224.2 178 67.4
Nitab4.5_0002545g0030 Nicotiana tabacum HOM05D004005 ORTHO05D004876 1.1e-56 223.8 176 60.8
FAN17G1822 Fragaria x ananassa HOM05D004005 ORTHO05D004876 1.4e-56 223.4 177 63.3
RcHm_v2.0_Chr4g0405201 Rosa chinensis HOM05D004005 ORTHO05D004876 1.4e-56 223.4 177 65.5
SGA_v2.0_scaffold233G43567 Striga asiatica HOM05D004005 ORTHO05D004876 1.4e-56 223.4 176 60.8
Migut.J01404 Erythranthe guttata HOM05D004005 ORTHO05D004876 4.0e-56 221.9 176 63.6
Eucgr.C01238 Eucalyptus grandis HOM05D004005 ORTHO05D004876 1.5e-55 219.9 176 66.5
Oeu045108.2 Olea europaea HOM05D004005 ORTHO05D004876 1.5e-55 219.9 178 61.2
Potri.018G100900 Populus trichocarpa HOM05D004005 ORTHO05D004876 1.5e-55 219.9 176 64.2
Thecc.09G157600 Theobroma cacao HOM05D004005 ORTHO05D004876 1.5e-55 219.9 177 63.8
CiPaw.08G000800 Carya illinoinensis HOM05D004005 ORTHO05D004876 2.0e-55 219.5 176 66.5
Cpa.g.sc199.4 Carica papaya HOM05D004005 ORTHO05D004876 4.4e-55 218.4 189 62.4
ECA240G0337 Erigeron canadensis HOM05D004005 ORTHO05D004876 1.3e-54 216.9 175 61.7
Gorai.004G105600 Gossypium raimondii HOM05D004005 ORTHO05D004876 1.3e-54 216.9 177 65.0
TWI34G0830 Tripterygium wilfordii HOM05D004005 ORTHO05D004876 2.2e-54 216.1 178 64.0
TAR636G3166 Trochodendron aralioides HOM05D004005 ORTHO05D004876 2.2e-54 216.1 177 66.7
DCAR_017932 Daucus carota HOM05D004005 ORTHO05D004876 2.9e-54 215.7 179 61.5
Sc14g0001030 Simmondsia chinensis HOM05D004005 ORTHO05D004876 6.4e-54 214.5 176 60.2
Duzib150G0934 Durio zibethinus HOM05D004005 ORTHO05D004876 8.3e-54 214.2 180 63.3
Duzib168G0635 Durio zibethinus HOM05D004005 ORTHO05D004876 1.1e-53 213.8 170 61.8
Gohir.D08G098200 Gossypium hirsutum HOM05D004005 ORTHO05D004876 1.9e-53 213.0 177 64.4
Gohir.A08G092600 Gossypium hirsutum HOM05D004005 ORTHO05D004876 3.2e-53 212.2 177 63.8
Sed0005377 Sechium edule HOM05D004005 ORTHO05D004876 4.1e-53 211.8 177 64.4
Atru.chr7.422 Acer truncatum HOM05D004005 ORTHO05D004876 5.4e-53 211.5 177 61.0
Duzib187G0310 Durio zibethinus HOM05D004005 ORTHO05D004876 2.1e-52 209.5 177 62.1
Manes.14G150200 Manihot esculenta HOM05D004005 ORTHO05D004876 4.6e-52 208.4 178 62.4
ClCG06G012740 Citrullus lanatus HOM05D004005 ORTHO05D004876 1.0e-51 207.2 178 64.0
ECA234G2728 Erigeron canadensis HOM05D004005 ORTHO05D004876 1.0e-51 207.2 175 60.6
Sabra18G0086900 Salix brachista HOM05D004005 ORTHO05D004876 2.3e-51 206.1 176 63.1
RcHm_v2.0_Chr2g0167931 Rosa chinensis HOM05D004005 ORTHO05D004876 8.6e-51 204.1 158 67.1
CsaV3_1G029280 Cucumis sativus L. HOM05D004005 ORTHO05D004876 1.9e-50 203.0 178 61.8
Peaxi162Scf00038g00327 Petunia axillaris HOM05D004005 ORTHO05D004876 4.3e-50 201.8 210 51.9
MELO3C010189.2 Cucumis melo HOM05D004005 ORTHO05D004876 7.3e-50 201.1 115 84.3
HanXRQChr10g0307841 Helianthus annuus HOM05D004005 ORTHO05D004876 9.6e-50 200.7 176 61.9
Ciclev10008098m.g Citrus clementina HOM05D004005 ORTHO05D004876 1.2e-49 200.3 179 62.6
HanXRQChr03g0065981 Helianthus annuus HOM05D004005 ORTHO05D004876 2.1e-49 199.5 175 58.9
Aqoxy5G00992 Aquilegia oxysepala HOM05D004005 ORTHO05D004876 2.8e-49 199.1 186 57.0
AUR62039768 Chenopodium quinoa HOM05D004005 ORTHO05D004876 2.8e-49 199.1 185 56.8
Lsat_1_v5_gn_5_88220 Lactuca sativa HOM05D004005 ORTHO05D004876 8.1e-49 197.6 176 60.8
PSO063G3364 Papaver somniferum HOM05D004005 ORTHO05D004876 1.8e-48 196.4 177 61.0
PSO782G3855 Papaver somniferum HOM05D004005 ORTHO05D004876 4.0e-48 195.3 177 61.0
MBI14_g16417_MAGBIO Magnolia biondii HOM05D004005 ORTHO05D004876 5.2e-48 194.9 180 62.2
Lsat_1_v5_gn_7_51181 Lactuca sativa HOM05D004005 ORTHO05D004876 6.8e-48 194.5 177 58.8
FAN12G2076 Fragaria x ananassa HOM05D004005 ORTHO05D004876 1.2e-47 193.7 206 50.5
SalBow6G1392 Salvia bowleyana HOM05D004005 ORTHO05D004876 4.4e-47 191.8 181 57.5
unitig_0.g2693 Utricularia gibba HOM05D004005 ORTHO05D004876 1.7e-46 189.9 183 56.8
THA.LOC104817817 Tarenaya hassleriana HOM05D004005 ORTHO05D004876 1.4e-45 186.8 178 57.9
EL10Ac8g18886 Beta vulgaris HOM05D004005 ORTHO05D004876 3.2e-45 185.7 176 56.2
THA.LOC104819957 Tarenaya hassleriana HOM05D004005 ORTHO05D004876 7.1e-45 184.5 183 54.1
DCAR_020096 Daucus carota HOM05D004005 ORTHO05D004876 3.5e-44 182.2 180 54.4
BcaNung00559 Brassica carinata HOM05D004005 ORTHO05D004876 1.0e-43 180.6 186 53.8
Glyma.02G207800 Glycine max HOM05D004005 ORTHO05D004876 1.3e-43 180.3 180 56.1
CDE04G0214 Ceratophyllum demersum HOM05D004005 ORTHO05D004876 1.7e-43 179.9 182 53.8
Phvul.003G152600 Phaseolus vulgaris HOM05D004005 ORTHO05D004876 2.3e-43 179.5 181 56.4
Medtr4g129950 Medicago truncatula HOM05D004005 ORTHO05D004876 1.1e-42 177.2 182 57.1
AL7G21650 Arabidopsis lyrata HOM05D004005 ORTHO05D004876 1.5e-42 176.8 125 70.4
Lalb_Chr12g0198871 Lupinus albus HOM05D004005 ORTHO05D004876 1.5e-42 176.8 178 55.6
Zm00001eb076820 Zea mays HOM05D004005 ORTHO05D004876 1.5e-42 176.8 181 51.9
A03p59900 Brassica napus HOM05D004005 ORTHO05D004876 1.9e-42 176.4 191 52.9
Glyma.17G069900 Glycine max HOM05D004005 ORTHO05D004876 1.9e-42 176.4 180 55.6
VMungo1215G0146 Vigna mungo HOM05D004005 ORTHO05D004876 1.9e-42 176.4 181 55.8
AT4G30490 Arabidopsis thaliana HOM05D004005 ORTHO05D004876 2.5e-42 176.0 125 69.6
C07p57960 Brassica napus HOM05D004005 ORTHO05D004876 4.3e-42 175.3 141 63.1
Psat0s3878g0040 Pisum sativum HOM05D004005 ORTHO05D004876 4.3e-42 175.3 184 53.8
CARHR238380 Cardamine hirsuta HOM05D004005 ORTHO05D004876 5.6e-42 174.9 121 70.2
BraA03t15047Z Brassica rapa HOM05D004005 ORTHO05D004876 7.3e-42 174.5 191 52.9
Zm00001eb426980 Zea mays HOM05D004005 ORTHO05D004876 7.3e-42 174.5 181 51.9
Thhalv10025004m.g Eutrema salsugineum HOM05D004005 ORTHO05D004876 1.3e-41 173.7 112 72.3
CDE02G0320 Ceratophyllum demersum HOM05D004005 ORTHO05D004876 2.1e-41 172.9 182 50.0
BolC7t46254H Brassica oleracea HOM05D004005 ORTHO05D004876 2.8e-41 172.6 142 63.4
Lj4g0005184 Lotus japonicus HOM05D004005 ORTHO05D004876 4.8e-41 171.8 181 56.4
Sp7g28370 Schrenkiella parvula HOM05D004005 ORTHO05D004876 8.1e-41 171.0 112 72.3
Carub.0007s1010 Capsella rubella HOM05D004005 ORTHO05D004876 1.1e-40 170.6 125 68.0
Ca_21161_v3 Cicer arietinum L. HOM05D004005 ORTHO05D004876 1.8e-40 169.9 187 54.0
Os08g0265500 Oryza sativa ssp. japonica HOM05D004005 ORTHO05D004876 2.4e-40 169.5 185 51.4
AT4G28070 Arabidopsis thaliana HOM05D004005 ORTHO05D004876 3.1e-40 169.1 125 68.0
AL7G24540 Arabidopsis lyrata HOM05D004005 ORTHO05D004876 6.9e-40 167.9 105 75.2
TPR.G24854 Trifolium pratense HOM05D004005 ORTHO05D004876 6.9e-40 167.9 182 54.4
BcaNung01599 Brassica carinata HOM05D004005 ORTHO05D004876 9.0e-40 167.5 115 71.3
Aa31LG2G20040 Aethionema arabicum HOM05D004005 ORTHO05D004876 2.0e-39 166.4 184 52.2
Carub.0007s1271 Capsella rubella HOM05D004005 ORTHO05D004876 2.0e-39 166.4 120 68.3
Sp7g26020 Schrenkiella parvula HOM05D004005 ORTHO05D004876 2.0e-39 166.4 178 52.8
A01p19450 Brassica napus HOM05D004005 ORTHO05D004876 2.6e-39 166.0 99 80.8
C01p24500 Brassica napus HOM05D004005 ORTHO05D004876 2.6e-39 166.0 99 80.8
BolC1t02399H Brassica oleracea HOM05D004005 ORTHO05D004876 2.6e-39 166.0 99 80.8
BraA01t01885Z Brassica rapa HOM05D004005 ORTHO05D004876 2.6e-39 166.0 99 80.8
Thhalv10025101m.g Eutrema salsugineum HOM05D004005 ORTHO05D004876 2.6e-39 166.0 179 53.1
HPP92_000253 Vanilla planifolia HOM05D004005 ORTHO05D004876 5.8e-39 164.9 119 65.5
BcaC09g50514 Brassica carinata HOM05D004005 ORTHO05D004876 1.3e-38 163.7 112 71.4
arahy.Tifrunner.gnm1.ann1.GLFY1J Arachis hypogaea HOM05D004005 ORTHO05D004876 8.4e-38 161.0 181 54.1
TAR383G0968 Trochodendron aralioides HOM05D004005 ORTHO05D004876 8.4e-38 161.0 165 57.6
arahy.Tifrunner.gnm1.ann1.GWW68B Arachis hypogaea HOM05D004005 ORTHO05D004876 1.9e-37 159.8 181 54.7
Lalb_Chr13g0300621 Lupinus albus HOM05D004005 ORTHO05D004876 1.9e-37 159.8 179 50.3
ATR0580G234 Amborella trichopoda HOM05D004005 ORTHO05D004876 1.3e-35 153.7 99 71.7
SEGI_21312 Sequoiadendron giganteum HOM05D004005 ORTHO05D004876 2.6e-31 139.4 112 65.2
CSS0050478 Camellia sinensis var. sinensis HOM05D004005 ORTHO05D004876 4.6e-28 128.6 73 83.6
CSS0036046 Camellia sinensis var. sinensis HOM05D004005 ORTHO05D004876 5.1e-27 125.2 81 77.8
Cc00_g13400 Coffea canephora HOM05D004005 ORTHO05D004876 3.7e-25 119.0 125 49.6
Pp3c22_9370 Physcomitrium patens HOM05D004005 ORTHO05D004876 1.9e-21 106.7 125 48.0
Mapoly0020s0008 Marchantia polymorpha HOM05D004005 ORTHO05D004876 3.9e-19 99.0 123 48.8
Pp3c18_12420 Physcomitrium patens HOM05D004005 ORTHO05D004876 2.5e-18 96.3 101 47.5
CSS0022607 Camellia sinensis var. sinensis HOM05D057942 ORTHO05D113130 2.1e-17 93.2 49 95.9
CSS0011767 Camellia sinensis var. sinensis HOM05D057942 ORTHO05D109337 6.2e-17 91.7 49 93.9
CARHR235770 Cardamine hirsuta HOM05D004005 ORTHO05D004876 1.1e-16 90.9 55 80.0
AUR62028391 Chenopodium quinoa HOM05D004005 ORTHO05D004876 1.4e-16 90.5 58 72.4
RcHm_v2.0_Chr6g0273951 Rosa chinensis HOM05D004005 ORTHO05D004876 3.4e-15 85.9 44 90.9
QL07p006097 Quercus lobata HOM05D003701 ORTHO05D030296 5.5e-13 78.6 41 85.4
MCO07G156 Micromonas commoda HOM05D004005 ORTHO05D004876 1.6e-09 67.0 159 35.2
Pp3c5_25460 Physcomitrium patens HOM05D004005 ORTHO05D004876 6.3e-09 65.1 98 36.7
Pp3c5_25630 Physcomitrium patens HOM05D004005 ORTHO05D004876 6.3e-09 65.1 98 36.7
CBR_g49493 Chara braunii HOM05D004005 ORTHO05D004876 2.4e-08 63.2 123 33.3
Cfa022368 Carpinus fangiana HOM05D004005 ORTHO05D004876 5.3e-08 62.0 153 34.0


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