Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007358 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 5.6e-59 230.7 114 100.0
CSS0012087 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 3.7e-55 218.0 113 92.9
CSS0043083 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 7.0e-54 213.8 109 96.3
CSS0012403 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 1.7e-52 209.1 113 90.3
CSS0008948 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 6.2e-50 200.7 110 89.1
CSS0035552 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 1.0e-49 199.9 109 90.8
Actinidia02155 Actinidia chinensis HOM05D005741 ORTHO05D007240 2.2e-39 165.6 110 73.6
Dinv39172 Davidia involucrata HOM05D005741 ORTHO05D007240 3.9e-36 154.8 111 68.5
Haze_07941 Corylus avellana HOM05D005741 ORTHO05D007240 1.6e-34 149.4 114 64.0
Dinv03497 Davidia involucrata HOM05D005741 ORTHO05D007240 2.1e-34 149.1 114 63.2
QL12p011266 Quercus lobata HOM05D005741 ORTHO05D007240 3.1e-33 145.2 113 61.1
vmacro00008 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 8.9e-33 143.7 112 64.3
Eucgr.E00405 Eucalyptus grandis HOM05D005741 ORTHO05D007240 1.5e-32 142.9 117 60.7
Sabra03G0049500 Salix brachista HOM05D005741 ORTHO05D007240 9.9e-32 140.2 115 61.7
C01p25020 Brassica napus HOM05D005741 ORTHO05D007240 1.3e-31 139.8 117 59.0
BolC1t02446H Brassica oleracea HOM05D005741 ORTHO05D007240 1.3e-31 139.8 117 59.0
BcaNung00094 Brassica carinata HOM05D005741 ORTHO05D007240 1.7e-31 139.4 117 59.8
CiPaw.11G082200 Carya illinoinensis HOM05D005741 ORTHO05D007240 1.7e-31 139.4 114 59.6
BraA01t01920Z Brassica rapa HOM05D005741 ORTHO05D007240 3.8e-31 138.3 117 58.1
BcaC09g50473 Brassica carinata HOM05D005741 ORTHO05D007240 4.9e-31 137.9 117 58.1
A01p19940 Brassica napus HOM05D005741 ORTHO05D007240 4.9e-31 137.9 117 58.1
Potri.003G079400 Populus trichocarpa HOM05D005741 ORTHO05D007240 1.1e-30 136.7 115 60.0
PGR042G2173 Punica granatum HOM05D005741 ORTHO05D007240 1.1e-30 136.7 115 56.5
PGSC0003DMG400004829 Solanum tuberosum HOM05D005741 ORTHO05D007240 1.1e-30 136.7 114 60.5
TWI15G0579 Tripterygium wilfordii HOM05D005741 ORTHO05D007240 1.1e-30 136.7 116 57.8
PSO063G3551 Papaver somniferum HOM05D005741 ORTHO05D007240 1.4e-30 136.3 113 59.3
TAR629G0196 Trochodendron aralioides HOM05D005741 ORTHO05D007240 1.4e-30 136.3 114 63.2
Thhalv10024957m.g Eutrema salsugineum HOM05D005741 ORTHO05D007240 2.4e-30 135.6 117 59.0
Manes.01G083800 Manihot esculenta HOM05D005741 ORTHO05D007240 2.4e-30 135.6 113 60.2
PSO782G4316 Papaver somniferum HOM05D005741 ORTHO05D007240 2.4e-30 135.6 113 59.3
Peaxi162Scf00214g00035 Petunia axillaris HOM05D005741 ORTHO05D007240 3.2e-30 135.2 114 58.8
TAR365G0013 Trochodendron aralioides HOM05D005741 ORTHO05D007240 5.4e-30 134.4 109 63.3
Migut.A01137 Erythranthe guttata HOM05D005741 ORTHO05D007240 7.1e-30 134.0 112 57.1
Thecc.03G247800 Theobroma cacao HOM05D005741 ORTHO05D007240 7.1e-30 134.0 115 60.0
COL.COLO4_37119 Corchorus olitorius HOM05D005741 ORTHO05D007240 9.2e-30 133.7 116 57.8
Oeu036348.1 Olea europaea HOM05D005741 ORTHO05D007240 1.2e-29 133.3 111 57.7
CARHR224030 Cardamine hirsuta HOM05D005741 ORTHO05D007240 1.6e-29 132.9 116 56.9
Nitab4.5_0001381g0010 Nicotiana tabacum HOM05D005741 ORTHO05D007240 2.1e-29 132.5 114 57.9
Prupe.5G065000 Prunus persica HOM05D005741 ORTHO05D007240 2.7e-29 132.1 117 59.0
Solyc08g078380.3 Solanum lycopersicum HOM05D005741 ORTHO05D007240 2.7e-29 132.1 114 56.1
Hma1.2p1_1136F.1_g260550 Hydrangea macrophylla HOM05D005741 ORTHO05D007240 3.5e-29 131.7 112 58.0
CANSAT21G0669 Cannabis sativa HOM05D005741 ORTHO05D007240 4.6e-29 131.3 114 56.1
THA.LOC104806667 Tarenaya hassleriana HOM05D005741 ORTHO05D007240 4.6e-29 131.3 115 59.1
MELO3C005514.2 Cucumis melo HOM05D005741 ORTHO05D007240 6.0e-29 131.0 116 57.8
MD04G1060600 Malus domestica HOM05D005741 ORTHO05D007240 6.0e-29 131.0 117 59.0
Sopen08g026870 Solanum pennellii HOM05D005741 ORTHO05D007240 6.0e-29 131.0 114 57.0
Nitab4.5_0003050g0020 Nicotiana tabacum HOM05D005741 ORTHO05D007240 7.8e-29 130.6 114 57.9
FvH4_5g19490 Fragaria vesca HOM05D005741 ORTHO05D007240 1.0e-28 130.2 117 57.3
FAN08G2842 Fragaria x ananassa HOM05D005741 ORTHO05D007240 1.0e-28 130.2 117 57.3
FAN13G2335 Fragaria x ananassa HOM05D005741 ORTHO05D007240 1.0e-28 130.2 117 57.3
Thhalv10000864m.g Eutrema salsugineum HOM05D005741 ORTHO05D007240 1.3e-28 129.8 116 53.4
RcHm_v2.0_Chr7g0204071 Rosa chinensis HOM05D005741 ORTHO05D007240 1.3e-28 129.8 117 55.6
FAN18G1401 Fragaria x ananassa HOM05D005741 ORTHO05D007240 1.7e-28 129.4 117 57.3
Carub.0007s2399 Capsella rubella HOM05D005741 ORTHO05D007240 2.3e-28 129.0 115 55.7
TWI81G0674 Tripterygium wilfordii HOM05D005741 ORTHO05D007240 3.0e-28 128.6 116 55.2
Duzib084G1038 Durio zibethinus HOM05D005741 ORTHO05D007240 3.9e-28 128.3 116 56.9
Gohir.A09G196600 Gossypium hirsutum HOM05D005741 ORTHO05D007240 3.9e-28 128.3 116 56.0
FAN04G2833 Fragaria x ananassa HOM05D005741 ORTHO05D007240 5.1e-28 127.9 117 56.4
FAN18G3259 Fragaria x ananassa HOM05D005741 ORTHO05D007240 6.6e-28 127.5 117 56.4
CsaV3_5G004450 Cucumis sativus L. HOM05D005741 ORTHO05D007240 8.6e-28 127.1 114 57.9
Duzib205G0633 Durio zibethinus HOM05D005741 ORTHO05D007240 8.6e-28 127.1 114 57.0
Aa31sc151G50 Aethionema arabicum HOM05D005741 ORTHO05D007240 1.1e-27 126.7 114 55.3
Os10g0561200 Oryza sativa ssp. japonica HOM05D005741 ORTHO05D007240 1.1e-27 126.7 111 54.1
Atru.chr9.1271 Acer truncatum HOM05D005741 ORTHO05D007240 1.9e-27 125.9 114 57.0
Gohir.D09G191200 Gossypium hirsutum HOM05D005741 ORTHO05D007240 1.9e-27 125.9 116 56.9
Gorai.006G214000 Gossypium raimondii HOM05D005741 ORTHO05D007240 1.9e-27 125.9 116 56.9
AL7G37290 Arabidopsis lyrata HOM05D005741 ORTHO05D007240 2.5e-27 125.6 116 54.3
Gohir.D03G165500 Gossypium hirsutum HOM05D005741 ORTHO05D007240 4.3e-27 124.8 119 50.4
Gorai.003G175200 Gossypium raimondii HOM05D005741 ORTHO05D007240 4.3e-27 124.8 119 50.4
GSVIVG01005817001 Vitis vinifera HOM05D005741 ORTHO05D007240 5.6e-27 124.4 113 56.6
Zm00001eb023170 Zea mays HOM05D005741 ORTHO05D007240 7.3e-27 124.0 111 55.0
AT4G17430 Arabidopsis thaliana HOM05D005741 ORTHO05D007240 9.6e-27 123.6 116 54.3
DCAR_008509 Daucus carota HOM05D005741 ORTHO05D007240 9.6e-27 123.6 111 57.7
Lj2A224T24 Lonicera japonica HOM05D005741 ORTHO05D007240 1.6e-26 122.9 109 56.9
SEGI_37405 Sequoiadendron giganteum HOM05D005741 ORTHO05D007240 2.1e-26 122.5 114 52.6
Aqoxy3G02814 Aquilegia oxysepala HOM05D005741 ORTHO05D007240 4.7e-26 121.3 111 55.0
Actinidia14404 Actinidia chinensis HOM05D005741 ORTHO05D007240 1.4e-25 119.8 84 67.9
CDE09G0915 Ceratophyllum demersum HOM05D005741 ORTHO05D007240 1.4e-25 119.8 114 53.5
Sed0015384 Sechium edule HOM05D005741 ORTHO05D007240 1.4e-25 119.8 115 53.9
ClCG01G004250 Citrullus lanatus HOM05D005741 ORTHO05D007240 1.8e-25 119.4 111 55.0
Ciclev10019844m.g Citrus clementina HOM05D005741 ORTHO05D007240 3.1e-25 118.6 113 52.2
HanXRQChr16g0501101 Helianthus annuus HOM05D005741 ORTHO05D007240 3.1e-25 118.6 114 54.4
Sc22g0001010 Simmondsia chinensis HOM05D005741 ORTHO05D007240 6.9e-25 117.5 110 54.5
CAN.G1178.14 Capsicum annuum HOM05D005741 ORTHO05D007240 8.9e-25 117.1 114 54.4
arahy.Tifrunner.gnm1.ann1.F09Q1T Arachis hypogaea HOM05D005741 ORTHO05D007240 1.2e-24 116.7 109 54.1
Cc08_g12130 Coffea canephora HOM05D005741 ORTHO05D007240 1.2e-24 116.7 114 50.9
Cc11_g11020 Coffea canephora HOM05D005741 ORTHO05D007240 1.2e-24 116.7 114 50.9
ECA233G5769 Erigeron canadensis HOM05D000263 ORTHO05D000213 1.2e-24 116.7 112 55.4
Medtr8g104850 Medicago truncatula HOM05D005741 ORTHO05D007240 2.0e-24 115.9 115 53.0
SGA_v2.0_scaffold199G41222 Striga asiatica HOM05D005741 ORTHO05D007240 2.0e-24 115.9 112 53.6
unitig_0.g1051 Utricularia gibba HOM05D005741 ORTHO05D007240 2.0e-24 115.9 113 49.6
CDE02G0403 Ceratophyllum demersum HOM05D005741 ORTHO05D007240 2.6e-24 115.5 114 52.6
Psat7g009600 Pisum sativum HOM05D005741 ORTHO05D007240 2.6e-24 115.5 113 51.3
arahy.Tifrunner.gnm1.ann1.915X16 Arachis hypogaea HOM05D005741 ORTHO05D007240 5.8e-24 114.4 109 53.2
ATR0057G109 Amborella trichopoda HOM05D005741 ORTHO05D007240 1.3e-23 113.2 114 47.4
QL05p056282 Quercus lobata HOM05D005741 ORTHO05D007240 1.3e-23 113.2 97 56.7
Ca_17300_v3 Cicer arietinum L. HOM05D005741 ORTHO05D007240 1.7e-23 112.8 113 52.2
Ca_17307_v3 Cicer arietinum L. HOM05D005741 ORTHO05D007240 1.7e-23 112.8 113 52.2
Nn6g33867 Nelumbo nucifera HOM05D005741 ORTHO05D007240 4.9e-23 111.3 111 48.6
EL10Ac1g01729 Beta vulgaris HOM05D005741 ORTHO05D007240 6.4e-23 110.9 111 50.5
TPR.G32686 Trifolium pratense HOM05D005741 ORTHO05D007240 6.4e-23 110.9 113 50.4
Glyma.13G055300 Glycine max HOM05D005741 ORTHO05D007240 1.9e-22 109.4 112 51.8
Glyma.19G032167 Glycine max HOM05D005741 ORTHO05D007240 1.2e-21 106.7 112 49.1
AUR62022412 Chenopodium quinoa HOM05D005741 ORTHO05D007240 3.5e-21 105.1 111 49.5
Lsat_1_v5_gn_6_59361 Lactuca sativa HOM05D005741 ORTHO05D007240 1.0e-20 103.6 114 48.2
AUR62042169 Chenopodium quinoa HOM05D005741 ORTHO05D007240 1.7e-20 102.8 111 50.5
Lj2g0010165 Lotus japonicus HOM05D005741 ORTHO05D007240 1.7e-20 102.8 113 48.7
Phvul.004G038100 Phaseolus vulgaris HOM05D005741 ORTHO05D007240 1.7e-20 102.8 113 49.6
SalBow5G2168 Salvia bowleyana HOM05D005741 ORTHO05D007240 1.7e-20 102.8 89 57.3
AagrBONN_evm.TU.Sc2ySwM_228.4051__4052 Anthoceros agrestis HOM05D005741 ORTHO05D007240 1.1e-19 100.1 115 44.3
Rhsim03G0144800 Rhododendron simsii HOM05D005741 ORTHO05D007240 1.1e-19 100.1 121 47.9
SHI07684 Sapria himalayana HOM05D005741 ORTHO05D007240 1.1e-19 100.1 106 50.0
VMungo0464G0479 Vigna mungo HOM05D005741 ORTHO05D007240 1.9e-19 99.4 107 50.5
Lalb_Chr07g0190101 Lupinus albus HOM05D005741 ORTHO05D007240 3.3e-19 98.6 109 47.7
SMO358G0726 Selaginella moellendorffii HOM05D005741 ORTHO05D007240 3.8e-15 85.1 108 43.5
Sed0012710 Sechium edule HOM05D005741 ORTHO05D007240 4.9e-15 84.7 113 43.4
vmacro00011 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 2.7e-13 79.0 81 54.3
Lj1g0021170 Lotus japonicus HOM05D005741 ORTHO05D007240 7.9e-13 77.4 113 44.2
Hma1.2p1_2773F.1_g328260 Hydrangea macrophylla HOM05D005741 ORTHO05D228475 2.3e-12 75.9 78 51.3
Pp3c6_17590 Physcomitrium patens HOM05D005741 ORTHO05D007240 2.3e-12 75.9 115 36.5
Mapoly0027s0023 Marchantia polymorpha HOM05D005741 ORTHO05D007240 1.9e-11 72.8 119 32.8
Hund30921 Selenicereus undatus HOM05D005741 ORTHO05D007240 3.3e-11 72.0 81 51.9
vmacro00009 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 4.3e-11 71.6 48 66.7
QL05p056380 Quercus lobata HOM05D005741 ORTHO05D007240 7.4e-11 70.9 91 40.7
Hund20780 Selenicereus undatus HOM05D005741 ORTHO05D007240 4.8e-10 68.2 81 49.4
Aa31LG6G170 Aethionema arabicum HOM05D005741 ORTHO05D007240 3.2e-06 55.5 51 51.0


User provided reference genes

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