Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007337 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 5.8e-149 530.8 256 100.0
CSS0008013 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 4.5e-125 451.4 249 88.8
vmacro23445 Vaccinium macrocarpon HOM05D007297 ORTHO05D009352 9.7e-112 407.1 255 76.9
Rhsim05G0044900 Rhododendron simsii HOM05D007297 ORTHO05D009352 1.5e-107 393.3 281 69.4
Dinv14179 Davidia involucrata HOM05D007297 ORTHO05D009352 1.8e-105 386.3 251 75.7
TAR381G0094 Trochodendron aralioides HOM05D007297 ORTHO05D009352 1.3e-95 353.6 248 68.1
GSVIVG01023865001 Vitis vinifera HOM05D007297 ORTHO05D009352 7.7e-93 344.4 249 67.5
Duzib132G0252 Durio zibethinus HOM05D007297 ORTHO05D009352 6.1e-90 334.7 249 64.7
Potri.004G207400 Populus trichocarpa HOM05D007297 ORTHO05D009352 8.9e-89 330.9 249 63.1
Ciclev10028691m.g Citrus clementina HOM05D007297 ORTHO05D009352 2.0e-88 329.7 249 65.5
Oeu032716.1 Olea europaea HOM05D007297 ORTHO05D009352 4.4e-88 328.6 252 64.3
ClCG02G003330 Citrullus lanatus HOM05D007297 ORTHO05D009352 9.8e-88 327.4 255 63.5
Nn5g31034 Nelumbo nucifera HOM05D007297 ORTHO05D009352 1.7e-87 326.6 252 61.5
CiPaw.05G093700 Carya illinoinensis HOM05D007297 ORTHO05D009352 6.3e-87 324.7 245 64.5
Lj9A408T85 Lonicera japonica HOM05D007297 ORTHO05D009352 3.1e-86 322.4 237 65.4
Cfa010687 Carpinus fangiana HOM05D007297 ORTHO05D009352 5.9e-85 318.2 248 64.1
FAN27G2312 Fragaria x ananassa HOM05D007297 ORTHO05D009352 5.9e-85 318.2 251 62.2
QL11p056524 Quercus lobata HOM05D007297 ORTHO05D009352 1.3e-84 317.0 243 63.8
FAN15G2550 Fragaria x ananassa HOM05D007297 ORTHO05D009352 2.3e-84 316.2 251 62.2
Prupe.8G180900 Prunus persica HOM05D007297 ORTHO05D009352 2.3e-84 316.2 260 61.5
DCAR_006267 Daucus carota HOM05D007297 ORTHO05D009352 6.6e-84 314.7 255 60.8
FvH4_2g16900 Fragaria vesca HOM05D007297 ORTHO05D009352 6.6e-84 314.7 249 61.8
PSO170G5512 Papaver somniferum HOM05D007297 ORTHO05D009352 8.6e-84 314.3 249 61.0
MBI05_g18176_MAGBIO Magnolia biondii HOM05D007297 ORTHO05D009352 1.1e-83 313.9 251 60.2
MD05G1140800 Malus domestica HOM05D007297 ORTHO05D009352 1.5e-83 313.5 246 61.0
Aqoxy5G00964 Aquilegia oxysepala HOM05D007297 ORTHO05D009352 2.5e-83 312.8 248 61.7
CsaV3_7G002000 Cucumis sativus L. HOM05D007297 ORTHO05D009352 2.5e-83 312.8 253 62.1
MD10G1142400 Malus domestica HOM05D007297 ORTHO05D009352 2.5e-83 312.8 246 62.2
TWI79G0145 Tripterygium wilfordii HOM05D007297 ORTHO05D009352 2.5e-83 312.8 249 60.2
MELO3C015706.2 Cucumis melo HOM05D007297 ORTHO05D009352 5.6e-83 311.6 253 62.1
Sed0028195 Sechium edule HOM05D007297 ORTHO05D009352 5.6e-83 311.6 251 61.8
Thecc.02G146900 Theobroma cacao HOM05D007297 ORTHO05D009352 5.6e-83 311.6 249 60.6
EL10Ac9g21544 Beta vulgaris HOM05D007297 ORTHO05D009352 9.5e-83 310.8 250 59.2
AUR62013182 Chenopodium quinoa HOM05D007297 ORTHO05D009352 9.5e-83 310.8 250 60.4
Manes.15G114700 Manihot esculenta HOM05D007297 ORTHO05D009352 1.2e-82 310.5 248 61.3
ECA233G4247 Erigeron canadensis HOM05D007297 ORTHO05D009352 2.1e-82 309.7 251 59.8
Gohir.D01G012700 Gossypium hirsutum HOM05D007297 ORTHO05D009352 2.1e-82 309.7 249 61.8
Gorai.002G014500 Gossypium raimondii HOM05D007297 ORTHO05D009352 2.1e-82 309.7 249 61.8
RcHm_v2.0_Chr6g0281021 Rosa chinensis HOM05D007297 ORTHO05D009352 4.7e-82 308.5 249 61.4
Gohir.A01G011500 Gossypium hirsutum HOM05D007297 ORTHO05D009352 8.0e-82 307.8 249 61.8
Eucgr.H04994 Eucalyptus grandis HOM05D007297 ORTHO05D009352 2.3e-81 306.2 249 61.4
PGSC0003DMG400016829 Solanum tuberosum HOM05D007297 ORTHO05D009352 5.2e-81 305.1 255 59.6
Nitab4.5_0001700g0150 Nicotiana tabacum HOM05D007297 ORTHO05D009352 6.8e-81 304.7 258 60.5
PGR042G0917 Punica granatum HOM05D007297 ORTHO05D009352 6.8e-81 304.7 252 59.1
Sopen10g027070 Solanum pennellii HOM05D007297 ORTHO05D009352 6.8e-81 304.7 255 59.6
arahy.Tifrunner.gnm1.ann1.114EL0 Arachis hypogaea HOM05D007297 ORTHO05D009352 1.5e-80 303.5 252 61.1
CANSAT25G3874 Cannabis sativa HOM05D007297 ORTHO05D009352 2.6e-80 302.8 250 59.2
AUR62010181 Chenopodium quinoa HOM05D007297 ORTHO05D009352 3.4e-80 302.4 250 59.2
Psat6g204280 Pisum sativum HOM05D007297 ORTHO05D009352 3.4e-80 302.4 250 59.2
Ca_10853_v3 Cicer arietinum L. HOM05D007297 ORTHO05D009352 5.8e-80 301.6 250 60.0
Solyc10g074580.2 Solanum lycopersicum HOM05D007297 ORTHO05D009352 5.8e-80 301.6 255 59.2
HanXRQChr16g0515151 Helianthus annuus HOM05D007297 ORTHO05D009352 7.5e-80 301.2 250 60.0
Lsat_1_v5_gn_8_120880 Lactuca sativa HOM05D007297 ORTHO05D009352 2.9e-79 299.3 258 58.5
Glyma.10G244200 Glycine max HOM05D007297 ORTHO05D009352 3.7e-79 298.9 249 58.6
Lj5g0024553 Lotus japonicus HOM05D007297 ORTHO05D009352 3.7e-79 298.9 253 57.7
Actinidia32005 Actinidia chinensis HOM05D007297 ORTHO05D009352 3.2e-78 295.8 249 62.2
MD05G1140400 Malus domestica HOM05D007297 ORTHO05D009352 5.4e-78 295.0 232 62.1
Hund06358 Selenicereus undatus HOM05D007297 ORTHO05D009352 5.4e-78 295.0 250 58.0
COL.COLO4_33139 Corchorus olitorius HOM05D007297 ORTHO05D009352 6.0e-77 291.6 223 64.1
Sc18g0005810 Simmondsia chinensis HOM05D007297 ORTHO05D009352 1.9e-75 286.6 249 57.4
VMungo0720G0116 Vigna mungo HOM05D007297 ORTHO05D009352 1.9e-75 286.6 247 56.3
Peaxi162Scf00374g00734 Petunia axillaris HOM05D007297 ORTHO05D009352 2.5e-75 286.2 281 53.4
Phvul.007G061600 Phaseolus vulgaris HOM05D007297 ORTHO05D009352 5.6e-75 285.0 247 56.3
Medtr1g102880 Medicago truncatula HOM05D007297 ORTHO05D009352 7.3e-75 284.6 250 56.4
SalBow5G1065 Salvia bowleyana HOM05D007297 ORTHO05D009352 9.5e-75 284.3 254 59.1
Migut.N01363 Erythranthe guttata HOM05D007297 ORTHO05D009352 1.4e-73 280.4 257 56.4
MSTRG.27611 Avicennia marina HOM05D007297 ORTHO05D009352 3.1e-73 279.3 254 56.3
Cc09_g10870 Coffea canephora HOM05D007297 ORTHO05D009352 2.0e-72 276.6 286 54.9
SalBow5G0092 Salvia bowleyana HOM05D007297 ORTHO05D009352 3.4e-72 275.8 253 58.1
ATR0807G066 Amborella trichopoda HOM05D007297 ORTHO05D009352 1.1e-70 270.8 260 55.0
arahy.Tifrunner.gnm1.ann1.F5MDAV Arachis hypogaea HOM05D007297 ORTHO05D009352 1.1e-70 270.8 252 56.7
THA.LOC104804081 Tarenaya hassleriana HOM05D007297 ORTHO05D009352 1.9e-70 270.0 259 55.2
Ah.01g017630 Amaranthus hybridus HOM05D007297 ORTHO05D009352 5.4e-70 268.5 249 53.4
SGA_v2.0_scaffold98G29306 Striga asiatica HOM05D007297 ORTHO05D009352 5.4e-70 268.5 253 55.3
Thhalv10025549m.g Eutrema salsugineum HOM05D007297 ORTHO05D009352 2.7e-69 266.2 255 52.5
Carub.0007s0016 Capsella rubella HOM05D007297 ORTHO05D009352 3.0e-68 262.7 255 52.2
Sp7g37510 Schrenkiella parvula HOM05D007297 ORTHO05D009352 3.0e-68 262.7 255 52.9
AT4G38225 Arabidopsis thaliana HOM05D007297 ORTHO05D009352 8.6e-68 261.2 256 51.6
AL7G10130 Arabidopsis lyrata HOM05D002051 ORTHO05D002041 4.3e-67 258.8 263 51.0
Aa31LG6G16890 Aethionema arabicum HOM05D007297 ORTHO05D009352 1.6e-66 256.9 260 51.9
BraA06t23859Z Brassica rapa HOM05D007027 ORTHO05D008765 8.1e-66 254.6 253 51.8
CARHR294010 Cardamine hirsuta HOM05D007297 ORTHO05D009352 6.8e-65 251.5 256 52.3
C05p07890 Brassica napus HOM05D007027 ORTHO05D008765 8.9e-65 251.1 254 50.8
BolC5t29540H Brassica oleracea HOM05D007027 ORTHO05D008765 8.9e-65 251.1 254 50.8
A06p06480 Brassica napus HOM05D007027 ORTHO05D008765 2.6e-64 249.6 253 51.4
Cpa.g.sc60.2 Carica papaya HOM05D007297 ORTHO05D009352 2.3e-60 236.5 182 63.2
unitig_26.g9984 Utricularia gibba HOM05D007297 ORTHO05D009352 2.3e-60 236.5 251 49.8
HPP92_012647 Vanilla planifolia HOM05D007297 ORTHO05D009352 4.7e-58 228.8 252 45.6
CDE05G3233 Ceratophyllum demersum HOM05D007297 ORTHO05D009352 1.7e-55 220.3 177 59.9
Os03g0128800 Oryza sativa ssp. japonica HOM05D007297 ORTHO05D009352 7.8e-53 211.5 258 44.6
Zm00001eb002190 Zea mays HOM05D007297 ORTHO05D009352 1.1e-51 207.6 257 43.2
Hma1.2p1_0271F.1_g108750 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 1.8e-49 200.3 158 64.6
Atru.chr5.3567 Acer truncatum HOM05D007297 ORTHO05D009352 8.4e-47 191.4 162 59.3
Hma1.2p1_1276F.1_g272150 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 2.4e-41 173.3 168 57.1
Pp3c17_19510 Physcomitrium patens HOM05D007297 ORTHO05D009352 3.8e-39 166.0 258 38.8
AagrBONN_evm.TU.Sc2ySwM_117.3353 Anthoceros agrestis HOM05D007297 ORTHO05D009352 1.6e-37 160.6 278 34.9
Pp3c2_4700 Physcomitrium patens HOM05D007297 ORTHO05D009352 1.3e-36 157.5 269 36.1
Mapoly0005s0259 Marchantia polymorpha HOM05D007297 ORTHO05D009352 7.6e-32 141.7 276 33.7
Hma1.2p1_0422F.1_g150110 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 2.7e-29 133.3 115 62.6
Hma1.2p1_1819F.1_g304100 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 9.6e-27 124.8 127 55.9
CBR_g49409 Chara braunii HOM05D001007 ORTHO05D008005 2.1e-26 123.6 197 38.6
Cpa.g.sc2396.1 Carica papaya HOM05D007297 ORTHO05D009352 9.0e-25 118.2 82 65.9
SMO356G0187 Selaginella moellendorffii HOM05D007297 ORTHO05D009352 7.1e-22 108.6 256 29.3
AL7G47220 Arabidopsis lyrata HOM05D007297 ORTHO05D009352 1.0e-20 104.8 113 50.4
Hma1.2p1_0367F.1_g137160 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 1.9e-19 100.5 133 47.4
MD11G1100600 Malus domestica HOM05D007297 ORTHO05D009352 7.2e-14 82.0 51 72.5
Cre12.g554600 Chlamydomonas reinhardtii HOM05D007297 ORTHO05D009352 4.8e-10 69.3 169 29.6
MCO13G078 Micromonas commoda HOM05D007297 ORTHO05D009352 1.7e-07 60.8 252 25.4


User provided reference genes

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