Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007335 Camellia sinensis var. sinensis HOM05D001259 ORTHO05D001103 6.3e-33 143.7 81 100.0
CSS0037025 Camellia sinensis var. sinensis HOM05D001259 ORTHO05D001103 1.2e-28 129.4 81 93.8
CSS0037971 Camellia sinensis var. sinensis HOM05D001259 ORTHO05D001103 1.3e-25 119.4 96 76.0
CSS0038801 Camellia sinensis var. sinensis HOM05D001259 ORTHO05D001103 1.1e-24 116.3 91 76.9
Rhsim03G0236800 Rhododendron simsii HOM05D001259 ORTHO05D001103 1.3e-14 82.8 92 57.6
Dinv36689 Davidia involucrata HOM05D001259 ORTHO05D001103 1.7e-14 82.4 96 54.2
Potri.018G087500 Populus trichocarpa HOM05D001259 ORTHO05D001103 2.3e-14 82.0 95 54.7
CSS0008651 Camellia sinensis var. sinensis HOM05D001259 ORTHO05D001103 3.9e-14 81.3 93 55.9
Hma1.2p1_0012F.1_g007350 Hydrangea macrophylla HOM05D001259 ORTHO05D001103 3.9e-14 81.3 92 59.8
Dinv41665 Davidia involucrata HOM05D001259 ORTHO05D001103 5.0e-14 80.9 95 57.9
QL02p041645 Quercus lobata HOM05D001259 ORTHO05D001103 6.6e-14 80.5 94 54.3
QL02p041676 Quercus lobata HOM05D001259 ORTHO05D001103 6.6e-14 80.5 94 54.3
Sabra18G0075700 Salix brachista HOM05D001259 ORTHO05D001103 3.3e-13 78.2 96 52.1
Ca_17363_v3 Cicer arietinum L. HOM05D002451 ORTHO05D007901 5.6e-13 77.4 95 52.6
GSVIVG01015304001 Vitis vinifera HOM05D001259 ORTHO05D001103 5.6e-13 77.4 93 53.8
Manes.16G108400 Manihot esculenta HOM05D001259 ORTHO05D001103 9.5e-13 76.6 96 51.0
Medtr8g102510 Medicago truncatula HOM05D001259 ORTHO05D001103 9.5e-13 76.6 95 53.7
Nitab4.5_0000566g0080 Nicotiana tabacum HOM05D001259 ORTHO05D001103 1.2e-12 76.3 92 53.3
Prupe.7G220100 Prunus persica HOM05D001259 ORTHO05D001103 2.1e-12 75.5 93 53.8
Actinidia32653 Actinidia chinensis HOM05D001259 ORTHO05D001103 4.7e-12 74.3 98 50.0
Cc06_g10450 Coffea canephora HOM05D001259 ORTHO05D001103 4.7e-12 74.3 79 57.0
Nn6g35325 Nelumbo nucifera HOM05D001259 ORTHO05D001103 4.7e-12 74.3 97 50.5
MSTRG.26384 Avicennia marina HOM05D001259 ORTHO05D001103 6.2e-12 73.9 95 51.6
Glyma.05G226900 Glycine max HOM05D001259 ORTHO05D001103 6.2e-12 73.9 80 57.5
Atru.chr7.1461 Acer truncatum HOM05D001259 ORTHO05D001103 1.1e-11 73.2 97 48.5
COL.COLO4_34746 Corchorus olitorius HOM05D001259 ORTHO05D001103 1.1e-11 73.2 91 53.8
Lj4g0011285 Lotus japonicus HOM05D001259 ORTHO05D001103 1.4e-11 72.8 94 52.1
Phvul.002G308900 Phaseolus vulgaris HOM05D001259 ORTHO05D001103 1.4e-11 72.8 94 52.1
Lalb_Chr24g0397321 Lupinus albus HOM05D001259 ORTHO05D001103 2.3e-11 72.0 90 50.0
Psat7g016960 Pisum sativum HOM05D001259 ORTHO05D001103 2.3e-11 72.0 94 51.1
Glyma.08G033700 Glycine max HOM05D001259 ORTHO05D001103 3.1e-11 71.6 94 53.2
HanXRQChr03g0061201 Helianthus annuus HOM05D001259 ORTHO05D001103 4.0e-11 71.2 95 51.6
Cfa003183 Carpinus fangiana HOM05D001259 ORTHO05D001103 5.2e-11 70.9 96 51.0
Lj2g0015337 Lotus japonicus HOM05D001259 ORTHO05D001103 5.2e-11 70.9 81 56.8
Oeu064181.1 Olea europaea HOM05D001259 ORTHO05D001103 5.2e-11 70.9 93 51.6
vmacro06251 Vaccinium macrocarpon HOM05D001259 ORTHO05D001103 5.2e-11 70.9 95 49.5
TPR.G21374 Trifolium pratense HOM05D001259 ORTHO05D001103 8.9e-11 70.1 94 48.9
CAN.G1241.32 Capsicum annuum HOM05D001259 ORTHO05D001103 1.2e-10 69.7 90 48.9
TPR.G23469 Trifolium pratense HOM05D001259 ORTHO05D001103 1.2e-10 69.7 94 51.1
TAR624G0650 Trochodendron aralioides HOM05D001259 ORTHO05D001103 1.2e-10 69.7 88 51.1
CSS0005097 Camellia sinensis var. sinensis HOM05D001259 ORTHO05D001103 1.5e-10 69.3 90 54.4
Ciclev10008680m.g Citrus clementina HOM05D001259 ORTHO05D001103 1.5e-10 69.3 96 45.8
ECA240G0832 Erigeron canadensis HOM05D001259 ORTHO05D001103 1.5e-10 69.3 95 50.5
MD15G1196300 Malus domestica HOM05D001259 ORTHO05D001103 1.5e-10 69.3 82 52.4
Solyc12g008460.2 Solanum lycopersicum HOM05D001259 ORTHO05D001103 1.5e-10 69.3 90 47.8
PGSC0003DMG400000297 Solanum tuberosum HOM05D001259 ORTHO05D001103 1.5e-10 69.3 90 47.8
CiPaw.04G158200 Carya illinoinensis HOM05D001259 ORTHO05D001103 2.0e-10 68.9 94 51.1
DCAR_010690 Daucus carota HOM05D001259 ORTHO05D001103 2.0e-10 68.9 78 52.6
Sopen12g003410 Solanum pennellii HOM05D001259 ORTHO05D001103 2.0e-10 68.9 90 47.8
Thecc.09G100900 Theobroma cacao HOM05D001259 ORTHO05D001103 2.0e-10 68.9 93 48.4
VMungo0251G0814 Vigna mungo HOM05D001259 ORTHO05D001103 2.6e-10 68.6 80 52.5
CsaV3_1G039770 Cucumis sativus L. HOM05D001259 ORTHO05D001103 3.4e-10 68.2 79 55.7
Sed0008394 Sechium edule HOM05D001259 ORTHO05D001103 3.4e-10 68.2 78 55.1
Sc18g0001480 Simmondsia chinensis HOM05D001259 ORTHO05D001103 3.4e-10 68.2 93 46.2
ECA240G1616 Erigeron canadensis HOM05D001259 ORTHO05D001103 4.4e-10 67.8 95 49.5
Aa31LG9G1990 Aethionema arabicum HOM05D001259 ORTHO05D001103 5.8e-10 67.4 90 50.0
MD02G1065400 Malus domestica HOM05D001259 ORTHO05D001103 7.5e-10 67.0 86 52.3
FAN28G1996 Fragaria x ananassa HOM05D001259 ORTHO05D001103 9.9e-10 66.6 91 48.4
PGR142G4262 Punica granatum HOM05D001259 ORTHO05D001103 9.9e-10 66.6 95 47.4
Carub.0003s2164 Capsella rubella HOM05D001259 ORTHO05D001103 1.3e-09 66.2 92 46.7
RcHm_v2.0_Chr2g0091841 Rosa chinensis HOM05D001259 ORTHO05D001103 1.3e-09 66.2 91 48.4
TWI63G0321 Tripterygium wilfordii HOM05D001259 ORTHO05D001103 1.3e-09 66.2 97 48.5
AT3G21600 Arabidopsis thaliana HOM05D001259 ORTHO05D001103 1.7e-09 65.9 92 47.8
Hund09111 Selenicereus undatus HOM05D001259 ORTHO05D001103 1.7e-09 65.9 99 46.5
arahy.Tifrunner.gnm1.ann1.436L1R Arachis hypogaea HOM05D001259 ORTHO05D001103 2.2e-09 65.5 79 54.4
arahy.Tifrunner.gnm1.ann1.VH3KGW Arachis hypogaea HOM05D001259 ORTHO05D001103 2.2e-09 65.5 79 54.4
ClCG03G016160 Citrullus lanatus HOM05D001259 ORTHO05D001103 2.2e-09 65.5 79 53.2
MELO3C015411.2 Cucumis melo HOM05D003954 ORTHO05D004627 2.2e-09 65.5 77 54.5
Glyma.01G008100 Glycine max HOM05D001259 ORTHO05D001103 2.2e-09 65.5 93 45.2
Medtr6g088680 Medicago truncatula HOM05D001259 ORTHO05D001103 2.2e-09 65.5 80 50.0
Lalb_Chr05g0223221 Lupinus albus HOM05D001259 ORTHO05D001103 2.9e-09 65.1 95 49.5
AL3G35720 Arabidopsis lyrata HOM05D001259 ORTHO05D001103 3.7e-09 64.7 92 46.7
Migut.K00537 Erythranthe guttata HOM05D001259 ORTHO05D001103 3.7e-09 64.7 97 49.5
Psat1g047160 Pisum sativum HOM05D001259 ORTHO05D001103 3.7e-09 64.7 80 48.8
Potri.006G164748 Populus trichocarpa HOM05D001259 ORTHO05D001103 3.7e-09 64.7 95 47.4
Sabra18G0075800 Salix brachista HOM05D001259 ORTHO05D001103 3.7e-09 64.7 95 45.3
arahy.Tifrunner.gnm1.ann1.E41BXM Arachis hypogaea HOM05D001259 ORTHO05D001103 4.9e-09 64.3 90 46.7
AUR62021411 Chenopodium quinoa HOM05D001259 ORTHO05D001103 4.9e-09 64.3 78 52.6
VMungo0464G1422 Vigna mungo HOM05D001259 ORTHO05D001103 4.9e-09 64.3 93 45.2
Ca_25570_v3 Cicer arietinum L. HOM05D001259 ORTHO05D001103 6.4e-09 63.9 80 48.8
Eucgr.C00998 Eucalyptus grandis HOM05D001259 ORTHO05D001103 6.4e-09 63.9 94 47.9
Gohir.A08G243000 Gossypium hirsutum HOM05D001259 ORTHO05D001103 8.3e-09 63.5 75 54.7
Glyma.16G078200 Glycine max HOM05D001259 ORTHO05D001103 1.1e-08 63.2 93 44.1
AUR62010915 Chenopodium quinoa HOM05D001259 ORTHO05D001103 1.4e-08 62.8 78 52.6
Thhalv10020930m.g Eutrema salsugineum HOM05D001259 ORTHO05D001103 1.4e-08 62.8 95 46.3
Gorai.004G281800 Gossypium raimondii HOM05D001259 ORTHO05D001103 1.4e-08 62.8 79 55.7
PSO210G1731 Papaver somniferum HOM05D001259 ORTHO05D001103 1.4e-08 62.8 99 45.5
Aa31LG8G8260 Aethionema arabicum HOM05D001259 ORTHO05D001103 1.9e-08 62.4 91 47.3
CANSAT56G3717 Cannabis sativa HOM05D001259 ORTHO05D001103 1.9e-08 62.4 91 44.0
CARHR097570 Cardamine hirsuta HOM05D001259 ORTHO05D001103 2.4e-08 62.0 93 45.2
CiPaw.04G158100 Carya illinoinensis HOM05D001259 ORTHO05D001103 2.4e-08 62.0 95 46.3
AL7G40100 Arabidopsis lyrata HOM05D001259 ORTHO05D001103 3.2e-08 61.6 90 45.6
Gohir.D08G263900 Gossypium hirsutum HOM05D001259 ORTHO05D001103 3.2e-08 61.6 79 54.4
Phvul.004G170500 Phaseolus vulgaris HOM05D001259 ORTHO05D001103 3.2e-08 61.6 93 43.0
Sabra06G0126600 Salix brachista HOM05D001259 ORTHO05D001103 5.4e-08 60.8 95 46.3
BcaNung00274 Brassica carinata HOM05D001259 ORTHO05D001103 7.1e-08 60.5 89 44.9
A05p27130 Brassica napus HOM05D001259 ORTHO05D001103 7.1e-08 60.5 83 45.8
BraA05t21599Z Brassica rapa HOM05D001259 ORTHO05D001103 7.1e-08 60.5 83 45.8
Gohir.A06G067100 Gossypium hirsutum HOM05D001259 ORTHO05D001103 7.1e-08 60.5 83 48.2
PSO210G2822 Papaver somniferum HOM05D001259 ORTHO05D001103 7.1e-08 60.5 98 44.9
BcaC09g50235 Brassica carinata HOM05D001259 ORTHO05D001103 1.2e-07 59.7 89 43.8
BolC1t02691H Brassica oleracea HOM05D001259 ORTHO05D001103 1.2e-07 59.7 89 43.8
Sp3g19620 Schrenkiella parvula HOM05D001259 ORTHO05D001103 1.2e-07 59.7 96 44.8
BcaB06g26265 Brassica carinata HOM05D001259 ORTHO05D001103 2.1e-07 58.9 83 44.6
BcaC05g28153 Brassica carinata HOM05D001259 ORTHO05D001103 2.1e-07 58.9 83 44.6
C01p27630 Brassica napus HOM05D001259 ORTHO05D001103 2.1e-07 58.9 86 43.0
C05p41870 Brassica napus HOM05D001259 ORTHO05D001103 2.1e-07 58.9 83 44.6
BolC5t32920H Brassica oleracea HOM05D001259 ORTHO05D001103 2.1e-07 58.9 83 44.6
Carub.0007s2646 Capsella rubella HOM05D001259 ORTHO05D001103 2.1e-07 58.9 90 43.3
SalBow1G3959 Salvia bowleyana HOM05D001259 ORTHO05D001103 2.1e-07 58.9 95 45.3
SalBow1G5873 Salvia bowleyana HOM05D001259 ORTHO05D001103 2.1e-07 58.9 95 45.3
FAN23G1183 Fragaria x ananassa HOM05D001259 ORTHO05D001103 3.5e-07 58.2 102 43.1
Thhalv10025458m.g Eutrema salsugineum HOM05D001259 ORTHO05D001103 4.6e-07 57.8 89 44.9
THA.LOC104802547 Tarenaya hassleriana HOM05D001259 ORTHO05D001103 4.6e-07 57.8 94 42.6
EL10Ac8g18382 Beta vulgaris HOM05D001259 ORTHO05D001103 7.8e-07 57.0 88 40.9
CDE05G3309 Ceratophyllum demersum HOM05D001259 ORTHO05D001103 1.0e-06 56.6 87 46.0
Lsat_1_v5_gn_7_39781 Lactuca sativa HOM05D001259 ORTHO05D001103 1.0e-06 56.6 95 42.1
Phvul.004G014300 Phaseolus vulgaris HOM05D001259 ORTHO05D001103 1.0e-06 56.6 88 43.2
Sp7g13670 Schrenkiella parvula HOM05D001259 ORTHO05D001103 1.3e-06 56.2 86 41.9
Os01g0723100 Oryza sativa ssp. japonica HOM05D001259 ORTHO05D001103 5.1e-06 54.3 73 46.6
A01p22130 Brassica napus HOM05D001259 ORTHO05D001103 8.6e-06 53.5 89 41.6
BraA01t02122Z Brassica rapa HOM05D001259 ORTHO05D001103 8.6e-06 53.5 89 41.6


User provided reference genes

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