Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007333 Camellia sinensis var. sinensis HOM05D006730 ORTHO05D008189 2.9e-154 548.5 271 100.0
CSS0011413 Camellia sinensis var. sinensis HOM05D006730 ORTHO05D008189 4.3e-126 454.9 299 79.6
Actinidia27097 Actinidia chinensis HOM05D006730 ORTHO05D008189 9.7e-102 374.0 291 69.1
Dinv05091 Davidia involucrata HOM05D006730 ORTHO05D008189 2.1e-80 303.1 265 60.8
vmacro21172 Vaccinium macrocarpon HOM05D006730 ORTHO05D008189 1.0e-74 284.3 288 55.2
vmacro00655 Vaccinium macrocarpon HOM05D006730 ORTHO05D008189 1.1e-73 280.8 288 55.2
TAR633G0487 Trochodendron aralioides HOM05D006730 ORTHO05D008189 3.8e-66 255.8 289 49.8
Prupe.8G045700 Prunus persica HOM05D006730 ORTHO05D008189 3.6e-64 249.2 293 46.4
Lj3A110T20 Lonicera japonica HOM05D006730 ORTHO05D008189 6.1e-64 248.4 281 50.2
Haze_01419 Corylus avellana HOM05D006730 ORTHO05D008189 1.0e-63 247.7 295 46.4
TAR633G1963 Trochodendron aralioides HOM05D006730 ORTHO05D008189 2.3e-63 246.5 289 48.4
Oeu002416.1 Olea europaea HOM05D006730 ORTHO05D008189 4.0e-63 245.7 278 52.5
CiPaw.01G173600 Carya illinoinensis HOM05D006730 ORTHO05D008189 8.8e-63 244.6 285 47.7
Nn1g09713 Nelumbo nucifera HOM05D006730 ORTHO05D008189 2.6e-62 243.0 289 48.1
Cfa015217 Carpinus fangiana HOM05D006730 ORTHO05D008189 1.7e-61 240.4 294 45.9
MD04G1046800 Malus domestica HOM05D006730 ORTHO05D008189 2.2e-61 240.0 295 48.5
Atru.chr4.1340 Acer truncatum HOM05D006730 ORTHO05D008189 4.8e-61 238.8 293 46.8
GSVIVG01038091001 Vitis vinifera HOM05D006730 ORTHO05D008189 3.1e-60 236.1 279 50.2
TAR633G2319 Trochodendron aralioides HOM05D006730 ORTHO05D008189 4.1e-60 235.7 277 48.4
Cpa.g.sc9.329 Carica papaya HOM05D006730 ORTHO05D008189 7.0e-60 235.0 294 47.3
QL10p052118 Quercus lobata HOM05D006730 ORTHO05D008189 1.6e-59 233.8 291 46.7
Duzib151G0982 Durio zibethinus HOM05D006730 ORTHO05D008189 7.7e-59 231.5 295 47.5
Hma1.2p1_0324F.1_g125720 Hydrangea macrophylla HOM05D006730 ORTHO05D008189 1.1e-57 227.6 299 46.5
Hma1.2p1_3037F.1_g331960 Hydrangea macrophylla HOM05D006730 ORTHO05D008189 1.1e-57 227.6 299 46.5
Manes.04G048400 Manihot esculenta HOM05D006730 ORTHO05D008189 1.1e-57 227.6 292 46.2
Thecc.04G171700 Theobroma cacao HOM05D006730 ORTHO05D008189 2.1e-56 223.4 296 45.9
Sc19g0000330 Simmondsia chinensis HOM05D006730 ORTHO05D008189 2.8e-56 223.0 286 44.4
ECA233G5772 Erigeron canadensis HOM05D005219 ORTHO05D006451 3.0e-55 219.5 292 42.5
Ciclev10019155m.g Citrus clementina HOM05D006730 ORTHO05D008189 3.4e-54 216.1 295 43.1
Eucgr.A00038 Eucalyptus grandis HOM05D006730 ORTHO05D008189 4.1e-52 209.1 294 44.9
Gohir.A02G010500 Gossypium hirsutum HOM05D006730 ORTHO05D008189 5.4e-52 208.8 304 43.1
Gohir.D02G011000 Gossypium hirsutum HOM05D006730 ORTHO05D008189 1.6e-51 207.2 304 42.8
MSTRG.27276 Avicennia marina HOM05D006730 ORTHO05D008189 1.3e-50 204.1 284 44.4
Gorai.005G013400 Gossypium raimondii HOM05D006730 ORTHO05D008189 1.3e-50 204.1 304 42.4
ClCG09G018880 Citrullus lanatus HOM05D006730 ORTHO05D008189 2.3e-50 203.4 286 39.9
Lsat_1_v5_gn_5_69460 Lactuca sativa HOM05D006730 ORTHO05D008189 8.6e-50 201.4 288 42.4
Nitab4.5_0001586g0210 Nicotiana tabacum HOM05D006730 ORTHO05D008189 2.5e-49 199.9 295 39.7
COL.COLO4_28380 Corchorus olitorius HOM05D006730 ORTHO05D008189 7.3e-49 198.4 291 43.3
CsaV3_7G002050 Cucumis sativus L. HOM05D006730 ORTHO05D008189 4.7e-48 195.7 294 38.1
SGA_v2.0_scaffold94G28623 Striga asiatica HOM05D006730 ORTHO05D008189 4.7e-48 195.7 279 44.1
CARHR138600 Cardamine hirsuta HOM05D006730 ORTHO05D008189 1.0e-47 194.5 289 40.8
Glyma.12G050000 Glycine max HOM05D006730 ORTHO05D008189 1.0e-47 194.5 296 40.5
AL7G49300 Arabidopsis lyrata HOM05D006730 ORTHO05D008189 1.8e-47 193.7 286 42.0
Sed0020880 Sechium edule HOM05D006730 ORTHO05D008189 2.3e-47 193.4 286 39.2
Nitab4.5_0001210g0010 Nicotiana tabacum HOM05D006730 ORTHO05D008189 2.0e-46 190.3 295 38.0
Nitab4.5_0002782g0010 Nicotiana tabacum HOM05D006730 ORTHO05D008189 2.0e-46 190.3 295 38.6
Aa31LG1G25250 Aethionema arabicum HOM05D006730 ORTHO05D008189 3.4e-46 189.5 291 41.9
VMungo0647G1321 Vigna mungo HOM05D006730 ORTHO05D008189 5.8e-46 188.7 271 39.9
SGA_v2.0_scaffold60G20910 Striga asiatica HOM05D005928 ORTHO05D007500 7.5e-46 188.3 279 43.0
Carub.0007s3500 Capsella rubella HOM05D006730 ORTHO05D008189 1.3e-45 187.6 279 43.0
MELO3C015702.2 Cucumis melo HOM05D006730 ORTHO05D008189 1.3e-45 187.6 286 37.4
Peaxi162Scf00180g00519 Petunia axillaris HOM05D006730 ORTHO05D008189 1.3e-45 187.6 296 38.5
TWI15G0430 Tripterygium wilfordii HOM05D006730 ORTHO05D008189 3.7e-45 186.0 294 37.4
CANSAT56G2182 Cannabis sativa HOM05D006730 ORTHO05D008189 4.9e-45 185.7 296 37.8
THA.LOC104805724 Tarenaya hassleriana HOM05D006730 ORTHO05D008189 1.9e-44 183.7 287 41.1
Medtr4g068005 Medicago truncatula HOM05D006730 ORTHO05D008189 7.0e-44 181.8 298 38.9
VMungo0720G0522 Vigna mungo HOM05D006730 ORTHO05D008189 7.0e-44 181.8 271 39.1
HanXRQChr17g0565921 Helianthus annuus HOM05D006730 ORTHO05D008189 2.0e-43 180.3 299 38.8
AT5G40520 Arabidopsis thaliana HOM05D006730 ORTHO05D008189 2.7e-43 179.9 286 40.6
PGSC0003DMG400026917 Solanum tuberosum HOM05D006730 ORTHO05D008189 3.5e-43 179.5 290 38.3
TPR.G34183 Trifolium pratense HOM05D006730 ORTHO05D008189 6.0e-43 178.7 299 37.5
Phvul.011G201600 Phaseolus vulgaris HOM05D006730 ORTHO05D008189 7.8e-43 178.3 275 38.5
Lalb_Chr03g0025971 Lupinus albus HOM05D006730 ORTHO05D008189 1.7e-42 177.2 295 39.7
Lalb_Chr03g0026031 Lupinus albus HOM05D006730 ORTHO05D008189 1.7e-42 177.2 295 39.7
arahy.Tifrunner.gnm1.ann1.S6BLSS Arachis hypogaea HOM05D006730 ORTHO05D008189 3.0e-42 176.4 282 40.1
Psat7g208760 Pisum sativum HOM05D006730 ORTHO05D008189 3.0e-42 176.4 283 39.6
AUR62028127 Chenopodium quinoa HOM05D006730 ORTHO05D008189 3.9e-42 176.0 274 40.1
MBI11_g10487_MAGBIO Magnolia biondii HOM05D006730 ORTHO05D008189 5.0e-42 175.6 290 42.1
Hund25530 Selenicereus undatus HOM05D006730 ORTHO05D008189 6.6e-42 175.3 290 38.3
Solyc06g073160.4 Solanum lycopersicum HOM05D006730 ORTHO05D008189 1.1e-41 174.5 295 36.9
arahy.Tifrunner.gnm1.ann1.PF62HI Arachis hypogaea HOM05D006730 ORTHO05D008189 1.5e-41 174.1 282 39.0
Potri.017G018300 Populus trichocarpa HOM05D006730 ORTHO05D008189 1.5e-41 174.1 295 38.6
Oeu029987.1 Olea europaea HOM05D006730 ORTHO05D008189 2.5e-41 173.3 187 52.9
Sopen06g029510 Solanum pennellii HOM05D006730 ORTHO05D008189 4.3e-41 172.6 296 36.5
FvH4_1g27220 Fragaria vesca HOM05D006730 ORTHO05D008189 5.6e-41 172.2 297 38.7
AUR62005936 Chenopodium quinoa HOM05D006730 ORTHO05D008189 1.2e-40 171.0 274 39.4
Ca_03751_v3 Cicer arietinum L. HOM05D006730 ORTHO05D008189 1.6e-40 170.6 293 37.2
FAN26G1825 Fragaria x ananassa HOM05D006730 ORTHO05D008189 4.7e-40 169.1 297 38.4
EL10Ac9g22987 Beta vulgaris HOM05D006730 ORTHO05D008189 6.2e-40 168.7 286 38.8
Ca_07546_v3 Cicer arietinum L. HOM05D006730 ORTHO05D008189 6.2e-40 168.7 281 37.4
FAN19G2476 Fragaria x ananassa HOM05D006730 ORTHO05D008189 6.2e-40 168.7 297 38.4
Sabra06G0076300 Salix brachista HOM05D006730 ORTHO05D008189 1.4e-39 167.5 286 38.5
Sabra17G0012500 Salix brachista HOM05D006730 ORTHO05D008189 2.3e-39 166.8 286 38.5
DCAR_027052 Daucus carota HOM05D006730 ORTHO05D008189 5.2e-39 165.6 247 42.5
A05p16170 Brassica napus HOM05D006730 ORTHO05D008189 1.7e-37 160.6 287 36.9
BraA05t20528Z Brassica rapa HOM05D006730 ORTHO05D008189 1.7e-37 160.6 287 36.9
Lj3g0015132 Lotus japonicus HOM05D006730 ORTHO05D008189 3.7e-37 159.5 273 36.6
RcHm_v2.0_Chr3g0487611 Rosa chinensis HOM05D006730 ORTHO05D008189 1.1e-36 157.9 302 37.1
Cc03_g12540 Coffea canephora HOM05D006730 ORTHO05D008189 3.2e-36 156.4 296 37.5
Sp7g05120 Schrenkiella parvula HOM05D006730 ORTHO05D008189 4.1e-36 156.0 293 35.8
BcaC08g44345 Brassica carinata HOM05D006730 ORTHO05D008189 1.6e-35 154.1 294 35.7
C06p17830 Brassica napus HOM05D006730 ORTHO05D008189 2.1e-35 153.7 294 35.7
BcaB02g08030 Brassica carinata HOM05D006730 ORTHO05D008189 1.3e-34 151.0 293 36.9
PGR102G2296 Punica granatum HOM05D006730 ORTHO05D008189 1.3e-34 151.0 295 33.9
BolC6t36977H Brassica oleracea HOM05D006730 ORTHO05D008189 1.7e-34 150.6 294 35.0
SHI01154 Sapria himalayana HOM05D006730 ORTHO05D008189 6.8e-31 138.7 282 33.0
Thhalv10027675m.g Eutrema salsugineum HOM05D006730 ORTHO05D008189 4.9e-29 132.5 295 34.6
SGA_v2.0_scaffold36G14479 Striga asiatica HOM05D000061 ORTHO05D008189 2.7e-27 126.7 288 35.1
FAN28G2072 Fragaria x ananassa HOM05D006730 ORTHO05D008189 1.1e-23 114.8 234 35.9
ATR0743G243 Amborella trichopoda HOM05D006730 ORTHO05D008189 1.2e-19 101.3 282 29.8
CDE07G0581 Ceratophyllum demersum HOM05D006730 ORTHO05D008189 2.7e-19 100.1 293 30.4
PSO017G5839 Papaver somniferum HOM05D006730 ORTHO05D008189 2.3e-18 97.1 296 27.4
unitig_26.g9736 Utricularia gibba HOM05D006730 ORTHO05D006349 1.8e-15 87.4 211 29.4
PSO063G4508 Papaver somniferum HOM05D006730 ORTHO05D008189 2.0e-14 84.0 285 26.7
FAN23G1889 Fragaria x ananassa HOM05D006730 ORTHO05D008189 5.8e-14 82.4 195 33.8
Ah.10g027090 Amaranthus hybridus HOM05D006730 ORTHO05D008189 1.3e-13 81.3 151 33.8
Os09g0103200 Oryza sativa ssp. japonica HOM05D006730 ORTHO05D008189 1.4e-12 77.8 289 26.0
Ah.10g027080 Amaranthus hybridus HOM05D006730 ORTHO05D008189 6.0e-11 72.4 106 43.4
HPP92_022486 Vanilla planifolia HOM05D001064 ORTHO05D000885 6.9e-07 58.9 181 26.0


User provided reference genes

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