Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007327 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 6.6e-143 510.8 271 100.0
CSS0034403 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 9.0e-124 447.2 269 91.1
Lj2C147G10 Lonicera japonica HOM05D000087 ORTHO05D005735 1.8e-55 220.3 244 53.7
Rhsim02G0255700 Rhododendron simsii HOM05D000087 ORTHO05D005735 4.0e-55 219.2 244 55.7
Dinv11465 Davidia involucrata HOM05D000087 ORTHO05D005735 1.3e-53 214.2 244 53.3
vmacro08519 Vaccinium macrocarpon HOM05D000087 ORTHO05D005735 9.2e-52 208.0 256 51.2
Prupe.5G137300 Prunus persica HOM05D000087 ORTHO05D005735 1.3e-50 204.1 243 50.2
TAR629G0355 Trochodendron aralioides HOM05D000087 ORTHO05D005735 3.3e-49 199.5 244 49.2
Haze_09232 Corylus avellana HOM05D000087 ORTHO05D005735 9.5e-49 198.0 253 47.8
Manes.17G015000 Manihot esculenta HOM05D000087 ORTHO05D005735 2.1e-48 196.8 302 44.0
GSVIVG01019707001 Vitis vinifera HOM05D000087 ORTHO05D005735 4.7e-48 195.7 241 49.0
Atru.chr9.2610 Acer truncatum HOM05D000087 ORTHO05D005735 6.1e-48 195.3 243 49.0
RcHm_v2.0_Chr7g0188131 Rosa chinensis HOM05D000087 ORTHO05D005735 1.0e-47 194.5 243 49.4
Cfa011874 Carpinus fangiana HOM05D000087 ORTHO05D005735 1.4e-47 194.1 243 49.8
FAN04G3195 Fragaria x ananassa HOM05D000087 ORTHO05D005735 1.4e-47 194.1 243 49.4
Ciclev10018581m.g Citrus clementina HOM05D000087 ORTHO05D005735 2.3e-47 193.4 243 49.8
FAN18G4270 Fragaria x ananassa HOM05D000087 ORTHO05D005735 4.0e-47 192.6 243 48.6
FvH4_5g10170 Fragaria vesca HOM05D000087 ORTHO05D005735 5.2e-47 192.2 243 48.6
QL02p026653 Quercus lobata HOM05D000087 ORTHO05D005735 6.8e-47 191.8 243 48.6
CsaV3_5G001350 Cucumis sativus L. HOM05D000087 ORTHO05D005735 1.5e-46 190.7 243 47.7
DCAR_010123 Daucus carota HOM05D000087 ORTHO05D005735 4.4e-46 189.1 304 42.4
MD06G1127500 Malus domestica HOM05D000087 ORTHO05D005735 5.8e-46 188.7 243 46.9
Thecc.03G213700 Theobroma cacao HOM05D000087 ORTHO05D005735 1.3e-45 187.6 233 50.6
CiPaw.11G106200 Carya illinoinensis HOM05D000087 ORTHO05D005735 2.2e-45 186.8 243 48.1
MELO3C005812.2 Cucumis melo HOM05D000087 ORTHO05D005735 4.9e-45 185.7 262 46.2
ClCG01G001230 Citrullus lanatus HOM05D000087 ORTHO05D005735 6.4e-45 185.3 276 44.9
Sed0004639 Sechium edule HOM05D000087 ORTHO05D005735 6.4e-45 185.3 243 48.6
Duzib068G0232 Durio zibethinus HOM05D000087 ORTHO05D005735 5.4e-44 182.2 243 45.3
Medtr3g080640 Medicago truncatula HOM05D000087 ORTHO05D005735 7.0e-44 181.8 246 45.1
TWI81G0850 Tripterygium wilfordii HOM05D000087 ORTHO05D005735 1.6e-43 180.6 243 45.7
PSO063G0654 Papaver somniferum HOM05D000087 ORTHO05D005735 3.5e-43 179.5 242 47.1
Psat5g111000 Pisum sativum HOM05D000087 ORTHO05D005735 4.6e-43 179.1 244 45.9
Actinidia22240 Actinidia chinensis HOM05D000087 ORTHO05D005735 7.8e-43 178.3 213 51.6
Glyma.06G180700 Glycine max HOM05D000087 ORTHO05D005735 1.7e-42 177.2 246 45.1
PSO782G2195 Papaver somniferum HOM05D000087 ORTHO05D005735 2.3e-42 176.8 242 47.1
FAN08G3226 Fragaria x ananassa HOM05D000087 ORTHO05D005735 6.6e-42 175.3 241 45.2
Lalb_Chr14g0362591 Lupinus albus HOM05D000087 ORTHO05D005735 6.6e-42 175.3 242 43.4
Nn3g18737 Nelumbo nucifera HOM05D000087 ORTHO05D005735 6.6e-42 175.3 250 46.4
Lj6g0001276 Lotus japonicus HOM05D000087 ORTHO05D005735 8.6e-42 174.9 246 43.9
Cc08_g17160 Coffea canephora HOM05D000087 ORTHO05D005735 1.5e-41 174.1 244 45.9
Eucgr.D02539 Eucalyptus grandis HOM05D000087 ORTHO05D005735 1.9e-41 173.7 248 43.1
VMungo1127G0184 Vigna mungo HOM05D000087 ORTHO05D005735 1.9e-41 173.7 243 45.7
HanXRQChr01g0016041 Helianthus annuus HOM05D000087 ORTHO05D005735 2.5e-41 173.3 244 45.9
Gohir.D08G120500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 5.6e-41 172.2 243 44.0
Gorai.004G127300 Gossypium raimondii HOM05D000087 ORTHO05D005735 5.6e-41 172.2 243 44.0
MSTRG.22476 Avicennia marina HOM05D000087 ORTHO05D005735 7.3e-41 171.8 256 42.6
Gohir.A08G107500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 7.3e-41 171.8 243 43.6
Phvul.011G167550 Phaseolus vulgaris HOM05D000087 ORTHO05D005735 9.5e-41 171.4 246 44.7
ECA246G1365 Erigeron canadensis HOM05D000087 ORTHO05D005735 2.8e-40 169.9 244 45.1
CANSAT64G2851 Cannabis sativa HOM05D000087 ORTHO05D005735 4.7e-40 169.1 243 43.2
Aa31LG6G16960 Aethionema arabicum HOM05D000087 ORTHO05D005735 8.9e-39 164.9 254 42.5
THA.LOC104806594 Tarenaya hassleriana HOM05D000087 ORTHO05D005735 1.2e-38 164.5 278 39.9
MBI04_g04806_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 1.5e-38 164.1 245 43.3
Sabra16G0307100 Salix brachista HOM05D000087 ORTHO05D005735 1.5e-38 164.1 251 44.2
CDE02G0276 Ceratophyllum demersum HOM05D000087 ORTHO05D005735 4.4e-38 162.5 246 43.9
Solyc07g008450.3 Solanum lycopersicum HOM05D000087 ORTHO05D005735 9.8e-38 161.4 241 45.2
Migut.H02249 Erythranthe guttata HOM05D000087 ORTHO05D005735 2.2e-37 160.2 263 41.4
Sopen07g004380 Solanum pennellii HOM05D000087 ORTHO05D005735 2.2e-37 160.2 241 44.0
Lsat_1_v5_gn_3_13301 Lactuca sativa HOM05D000087 ORTHO05D005735 3.7e-37 159.5 304 38.5
Sp7g37630 Schrenkiella parvula HOM05D000087 ORTHO05D005735 3.7e-37 159.5 241 44.0
PGR031G2531 Punica granatum HOM05D000087 ORTHO05D005735 1.4e-36 157.5 243 42.4
AL7G10010 Arabidopsis lyrata HOM05D000087 ORTHO05D005735 1.9e-36 157.1 240 43.3
AT4G38120 Arabidopsis thaliana HOM05D000087 ORTHO05D005735 3.2e-36 156.4 240 43.3
CARHR143600 Cardamine hirsuta HOM05D000087 ORTHO05D005735 4.1e-36 156.0 241 44.0
Thhalv10024269m.g Eutrema salsugineum HOM05D000087 ORTHO05D005735 4.1e-36 156.0 236 45.8
MD14G1143100 Malus domestica HOM05D000087 ORTHO05D005735 5.4e-36 155.6 211 46.4
AUR62009145 Chenopodium quinoa HOM05D000087 ORTHO05D005735 7.0e-36 155.2 272 39.3
Carub.0007s0001 Capsella rubella HOM05D000087 ORTHO05D005735 1.2e-35 154.5 240 42.9
Sc01g0010950 Simmondsia chinensis HOM05D000087 ORTHO05D005735 2.1e-35 153.7 297 36.7
CAN.G1548.2 Capsicum annuum HOM05D000087 ORTHO05D005735 2.7e-35 153.3 300 39.0
AUR62039113 Chenopodium quinoa HOM05D000087 ORTHO05D005735 2.7e-35 153.3 272 39.0
Potri.001G454200 Populus trichocarpa HOM05D000087 ORTHO05D005735 3.5e-35 152.9 165 54.5
Peaxi162Scf00046g00228 Petunia axillaris HOM05D000087 ORTHO05D005735 4.6e-35 152.5 241 41.9
C01p21480 Brassica napus HOM05D000087 ORTHO05D005735 1.0e-34 151.4 241 40.7
BolC1t02068H Brassica oleracea HOM05D000087 ORTHO05D005735 1.0e-34 151.4 241 40.7
Hund03336 Selenicereus undatus HOM05D000087 ORTHO05D005735 1.7e-34 150.6 298 40.9
arahy.Tifrunner.gnm1.ann1.DH86LW Arachis hypogaea HOM05D000087 ORTHO05D005735 3.0e-34 149.8 220 43.2
A01p17150 Brassica napus HOM05D000087 ORTHO05D005735 6.6e-34 148.7 241 40.7
BraA01t01671Z Brassica rapa HOM05D000087 ORTHO05D005735 6.6e-34 148.7 241 40.7
Aqoxy5G04397 Aquilegia oxysepala HOM05D000087 ORTHO05D005735 8.6e-34 148.3 169 51.5
EL10Ac2g03880 Beta vulgaris HOM05D000087 ORTHO05D005735 1.1e-33 147.9 240 41.7
arahy.Tifrunner.gnm1.ann1.0XGN9Z Arachis hypogaea HOM05D000087 ORTHO05D005735 1.9e-33 147.1 223 43.5
FAN18G0494 Fragaria x ananassa HOM05D000087 ORTHO05D005735 7.3e-33 145.2 233 44.6
SGA_v2.0_scaffold123G33449 Striga asiatica HOM05D000087 ORTHO05D005735 6.2e-32 142.1 363 34.2
Nitab4.5_0000491g0190 Nicotiana tabacum HOM05D000087 ORTHO05D005735 2.3e-31 140.2 212 44.3
Nitab4.5_0007502g0010 Nicotiana tabacum HOM05D000087 ORTHO05D005735 4.4e-30 136.0 269 39.4
ATR0579G142 Amborella trichopoda HOM05D000087 ORTHO05D005735 7.8e-27 125.2 244 34.8
HPP92_008913 Vanilla planifolia HOM05D000087 ORTHO05D005735 5.1e-26 122.5 245 36.7
COL.COLO4_10863 Corchorus olitorius HOM05D000087 ORTHO05D005735 5.6e-25 119.0 84 69.0
Zm00001eb416210 Zea mays HOM05D000087 ORTHO05D005735 1.1e-23 114.8 204 37.3
Os08g0152900 Oryza sativa ssp. japonica HOM05D000087 ORTHO05D005735 3.1e-23 113.2 243 34.2
HPP92_028198 Vanilla planifolia HOM05D000087 ORTHO05D005735 4.2e-20 102.8 174 39.7
SEGI_15816 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 6.0e-19 99.0 241 34.9
Mapoly0043s0141 Marchantia polymorpha HOM05D000087 ORTHO05D005735 1.8e-15 87.4 243 31.7
CARHR293870 Cardamine hirsuta HOM05D000087 ORTHO05D005735 3.2e-12 76.6 87 50.6
SMO367G1062 Selaginella moellendorffii HOM05D000087 ORTHO05D005735 2.8e-08 63.5 239 25.9
CSS0049190 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 4.8e-08 62.8 107 43.0
CSS0033050 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 1.8e-07 60.8 116 40.5
CSS0034676 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 1.8e-07 60.8 88 46.6
Pp3c3_37190 Physcomitrium patens HOM05D000087 ORTHO05D005735 6.9e-07 58.9 220 27.3


User provided reference genes

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