Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007325 Camellia sinensis var. sinensis HOM05D000761 ORTHO05D001062 8.1e-43 176.4 74 100.0
CSS0020856 Camellia sinensis var. sinensis HOM05D000761 ORTHO05D001062 2.1e-11 72.0 34 88.2
CSS0024893 Camellia sinensis var. sinensis HOM05D000761 ORTHO05D001062 2.1e-11 72.0 34 88.2
vmacro16058 Vaccinium macrocarpon HOM05D000761 ORTHO05D001062 4.8e-11 70.9 36 83.3
Dinv16787 Davidia involucrata HOM05D000761 ORTHO05D001062 8.1e-11 70.1 34 82.4
CSS0010140 Camellia sinensis var. sinensis HOM05D000761 ORTHO05D001062 1.8e-10 68.9 36 80.6
TAR629G1411 Trochodendron aralioides HOM05D000761 ORTHO05D001062 1.8e-10 68.9 34 82.4
TAR627G0125 Trochodendron aralioides HOM05D000761 ORTHO05D001062 3.1e-10 68.2 34 82.4
Cfa000621 Carpinus fangiana HOM05D000761 ORTHO05D001062 4.0e-10 67.8 34 76.5
Rhsim13G0189500 Rhododendron simsii HOM05D000761 ORTHO05D001062 1.2e-09 66.2 33 81.8
CSS0018121 Camellia sinensis var. sinensis HOM05D000761 ORTHO05D001062 2.0e-09 65.5 36 77.8
Rhsim02G0143600 Rhododendron simsii HOM05D000761 ORTHO05D001062 2.0e-09 65.5 33 81.8
Haze_06214 Corylus avellana HOM05D000761 ORTHO05D001062 3.4e-09 64.7 34 73.5
Gorai.010G241800 Gossypium raimondii HOM05D000761 ORTHO05D001062 3.4e-09 64.7 34 76.5
Lj2C302T3 Lonicera japonica HOM05D000761 ORTHO05D001062 4.5e-09 64.3 36 75.0
Gohir.A09G074400 Gossypium hirsutum HOM05D000761 ORTHO05D001062 7.6e-09 63.5 34 73.5
Gohir.D09G074200 Gossypium hirsutum HOM05D000761 ORTHO05D001062 7.6e-09 63.5 34 73.5
Gorai.006G089100 Gossypium raimondii HOM05D000761 ORTHO05D001062 7.6e-09 63.5 34 73.5
Lj6g0003778 Lotus japonicus HOM05D000761 ORTHO05D001062 7.6e-09 63.5 37 67.6
Gohir.D06G207400 Gossypium hirsutum HOM05D000761 ORTHO05D001062 1.0e-08 63.2 34 73.5
Psat7g070960 Pisum sativum HOM05D000761 ORTHO05D001062 1.0e-08 63.2 34 70.6
Duzib160G0402 Durio zibethinus HOM05D000761 ORTHO05D001062 1.3e-08 62.8 36 72.2
Thecc.06G169100 Theobroma cacao HOM05D000761 ORTHO05D001062 1.3e-08 62.8 36 72.2
vmacro03925 Vaccinium macrocarpon HOM05D000761 ORTHO05D001062 1.7e-08 62.4 36 72.2
Duzib235G0869 Durio zibethinus HOM05D000761 ORTHO05D001062 2.9e-08 61.6 36 72.2
Nn1g09162 Nelumbo nucifera HOM05D000761 ORTHO05D001062 2.9e-08 61.6 40 67.5
Gohir.A06G200100 Gossypium hirsutum HOM05D000761 ORTHO05D001062 3.8e-08 61.2 34 73.5
Nn1g04461 Nelumbo nucifera HOM05D000761 ORTHO05D001062 3.8e-08 61.2 34 73.5
Oeu042426.1 Olea europaea HOM05D000761 ORTHO05D001062 3.8e-08 61.2 36 75.0
GSVIVG01021228001 Vitis vinifera HOM05D000761 ORTHO05D001062 3.8e-08 61.2 36 75.0
EL10Ac4g08351 Beta vulgaris HOM05D000761 ORTHO05D001062 4.9e-08 60.8 34 67.6
QL05p047732 Quercus lobata HOM05D000761 ORTHO05D001062 8.4e-08 60.1 36 63.9
SalBow8G0215 Salvia bowleyana HOM05D000761 ORTHO05D001062 8.4e-08 60.1 36 61.1
AUR62037550 Chenopodium quinoa HOM05D000761 ORTHO05D001062 1.1e-07 59.7 34 67.6
Oeu001079.2 Olea europaea HOM05D000761 ORTHO05D001062 1.1e-07 59.7 36 72.2
arahy.Tifrunner.gnm1.ann1.KZTX3E Arachis hypogaea HOM05D000761 ORTHO05D001062 1.4e-07 59.3 34 70.6
CDE10G0667 Ceratophyllum demersum HOM05D000761 ORTHO05D001062 1.4e-07 59.3 34 67.6
Ca_00444_v3 Cicer arietinum L. HOM05D000761 ORTHO05D001062 1.4e-07 59.3 37 67.6
COL.COLO4_31277 Corchorus olitorius HOM05D000761 ORTHO05D001062 1.4e-07 59.3 36 66.7
Sc03g0010540 Simmondsia chinensis HOM05D000761 ORTHO05D001062 1.9e-07 58.9 34 67.6
Duzib192G0581 Durio zibethinus HOM05D000761 ORTHO05D001062 2.5e-07 58.5 36 66.7
Manes.17G056800 Manihot esculenta HOM05D000761 ORTHO05D001062 2.5e-07 58.5 34 67.6
Potri.011G067400 Populus trichocarpa HOM05D000761 ORTHO05D001062 2.5e-07 58.5 34 67.6
Lj4g0016552 Lotus japonicus HOM05D000761 ORTHO05D001062 3.2e-07 58.2 34 67.6
Lalb_Chr07g0186421 Lupinus albus HOM05D000761 ORTHO05D001062 3.2e-07 58.2 34 64.7
Potri.004G058100 Populus trichocarpa HOM05D000761 ORTHO05D001062 3.2e-07 58.2 34 70.6
SEGI_40162 Sequoiadendron giganteum HOM05D000761 ORTHO05D001062 3.2e-07 58.2 34 70.6
Actinidia35582 Actinidia chinensis HOM05D000761 ORTHO05D001062 4.2e-07 57.8 30 76.7
CiPaw.09G070700 Carya illinoinensis HOM05D000761 ORTHO05D001062 4.2e-07 57.8 32 68.8
Glyma.15G083800 Glycine max HOM05D000761 ORTHO05D001062 5.5e-07 57.4 34 67.6
Lalb_Chr12g0205071 Lupinus albus HOM05D000761 ORTHO05D001062 5.5e-07 57.4 30 73.3
Medtr2g016320 Medicago truncatula HOM05D000761 ORTHO05D001062 5.5e-07 57.4 34 70.6
Medtr2g016360 Medicago truncatula HOM05D000761 ORTHO05D001062 5.5e-07 57.4 34 70.6
Aqoxy4G00315 Aquilegia oxysepala HOM05D000761 ORTHO05D001062 7.1e-07 57.0 34 67.6
Lj1C1191T14 Lonicera japonica HOM05D000761 ORTHO05D001062 7.1e-07 57.0 37 70.3
Lalb_Chr18g0054591 Lupinus albus HOM05D000761 ORTHO05D001062 7.1e-07 57.0 34 70.6
Lsat_1_v5_gn_1_16180 Lactuca sativa HOM05D000761 ORTHO05D001062 9.3e-07 56.6 30 73.3
Oeu043112.1 Olea europaea HOM05D000761 ORTHO05D001062 9.3e-07 56.6 34 67.6
Sabra04G0037700 Salix brachista HOM05D000761 ORTHO05D001062 9.3e-07 56.6 34 70.6
Solyc02g021590.3 Solanum lycopersicum HOM05D000761 ORTHO05D001062 9.3e-07 56.6 36 63.9
Sopen02g006150 Solanum pennellii HOM05D000761 ORTHO05D001062 9.3e-07 56.6 36 63.9
Peaxi162Scf00768g00114 Petunia axillaris HOM05D000761 ORTHO05D001062 1.2e-06 56.2 34 64.7
Lsat_1_v5_gn_4_48900 Lactuca sativa HOM05D000761 ORTHO05D001062 1.6e-06 55.8 30 70.0
Peaxi162Scf00854g00049 Petunia axillaris HOM05D000761 ORTHO05D001062 1.6e-06 55.8 36 63.9
AUR62019582 Chenopodium quinoa HOM05D000761 ORTHO05D001062 2.1e-06 55.5 34 61.8
CANSAT11G2392 Cannabis sativa HOM05D000761 ORTHO05D001062 2.7e-06 55.1 34 61.8
Cpa.g.sc7.80 Carica papaya HOM05D000761 ORTHO05D001062 2.7e-06 55.1 36 61.1
Cc02_g15130 Coffea canephora HOM05D000761 ORTHO05D001062 2.7e-06 55.1 36 63.9
Migut.M01029 Erythranthe guttata HOM05D000761 ORTHO05D001062 2.7e-06 55.1 36 63.9
Lalb_Chr15g0086131 Lupinus albus HOM05D000761 ORTHO05D001062 2.7e-06 55.1 34 67.6
PSO782G5213 Papaver somniferum HOM05D000761 ORTHO05D001062 2.7e-06 55.1 34 64.7
TPR.G24359 Trifolium pratense HOM05D000761 ORTHO05D001062 2.7e-06 55.1 34 61.8
Ciclev10014435m.g Citrus clementina HOM05D000761 ORTHO05D001062 3.5e-06 54.7 34 64.7
Actinidia07646 Actinidia chinensis HOM05D000761 ORTHO05D001062 4.6e-06 54.3 36 63.9
ECA248G3677 Erigeron canadensis HOM05D000761 ORTHO05D001062 4.6e-06 54.3 32 68.8
Nitab4.5_0000165g0150 Nicotiana tabacum HOM05D000761 ORTHO05D001062 4.6e-06 54.3 37 56.8
Phvul.002G238900 Phaseolus vulgaris HOM05D000761 ORTHO05D001062 4.6e-06 54.3 34 61.8
Ah.06g185420 Amaranthus hybridus HOM05D000761 ORTHO05D001062 6.0e-06 53.9 34 58.8
Ca_17917_v3 Cicer arietinum L. HOM05D000761 ORTHO05D001062 6.0e-06 53.9 34 61.8
Glyma.13G228700 Glycine max HOM05D000761 ORTHO05D001062 6.0e-06 53.9 34 64.7
Lalb_Chr13g0295161 Lupinus albus HOM05D000761 ORTHO05D001062 6.0e-06 53.9 34 61.8
Medtr8g086390 Medicago truncatula HOM05D000761 ORTHO05D001062 6.0e-06 53.9 34 61.8
Nitab4.5_0000605g0070 Nicotiana tabacum HOM05D000761 ORTHO05D001062 6.0e-06 53.9 36 61.1
ATR0012G021 Amborella trichopoda HOM05D000761 ORTHO05D001062 7.9e-06 53.5 34 61.8
CDE06G0913 Ceratophyllum demersum HOM05D000761 ORTHO05D001062 7.9e-06 53.5 34 64.7
CsaV3_1G033280 Cucumis sativus L. HOM05D000761 ORTHO05D001062 7.9e-06 53.5 30 70.0
MBI06_g08609_MAGBIO Magnolia biondii HOM05D000761 ORTHO05D001062 7.9e-06 53.5 34 64.7
MBI06_g45398_MAGBIO Magnolia biondii HOM05D000761 ORTHO05D001062 7.9e-06 53.5 34 64.7
MBI15_g40302_MAGBIO Magnolia biondii HOM05D000761 ORTHO05D001062 7.9e-06 53.5 37 64.9
SalBow7G3557 Salvia bowleyana HOM05D000761 ORTHO05D001062 7.9e-06 53.5 34 61.8
TPR.G27341 Trifolium pratense HOM05D000761 ORTHO05D001062 7.9e-06 53.5 34 64.7


User provided reference genes

Program Settings