Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007320 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 6.5e-179 630.6 309 100.0
CSS0035829 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 5.7e-167 590.9 309 94.2
Actinidia38870 Actinidia chinensis HOM05D007188 ORTHO05D009102 3.1e-80 302.8 199 75.4
GSVIVG01016213001 Vitis vinifera HOM05D007188 ORTHO05D009102 1.2e-68 264.2 201 67.7
TAR623G0008 Trochodendron aralioides HOM05D007188 ORTHO05D009102 1.6e-68 263.8 206 66.0
Nn6g35269 Nelumbo nucifera HOM05D007188 ORTHO05D009102 1.0e-67 261.2 203 66.5
Manes.07G133140 Manihot esculenta HOM05D007188 ORTHO05D009102 1.4e-67 260.8 207 65.2
Sabra08G0023300 Salix brachista HOM05D007188 ORTHO05D009102 4.0e-67 259.2 205 66.3
Potri.008G034900 Populus trichocarpa HOM05D007188 ORTHO05D009102 6.7e-67 258.5 182 72.5
QL08p054189 Quercus lobata HOM05D007188 ORTHO05D009102 8.8e-67 258.1 193 67.9
Cc02_g10880 Coffea canephora HOM05D007188 ORTHO05D009102 4.4e-66 255.8 206 68.0
RhsimUnG0185400 Rhododendron simsii HOM05D007188 ORTHO05D009102 7.5e-66 255.0 142 88.7
CiPaw.02G171800 Carya illinoinensis HOM05D007188 ORTHO05D009102 2.2e-65 253.4 180 72.2
Cfa001805 Carpinus fangiana HOM05D007188 ORTHO05D009102 4.8e-65 252.3 206 66.0
Dinv31237 Davidia involucrata HOM05D007188 ORTHO05D009102 6.3e-65 251.9 169 74.6
Eucgr.G02872 Eucalyptus grandis HOM05D007188 ORTHO05D009102 6.3e-65 251.9 167 71.9
Rhsim09G0148000 Rhododendron simsii HOM05D007188 ORTHO05D009102 6.3e-65 251.9 142 88.0
Glyma.20G183500 Glycine max HOM05D007188 ORTHO05D009102 1.8e-64 250.4 184 69.6
RcHm_v2.0_Chr1g0362491 Rosa chinensis HOM05D007188 ORTHO05D009102 4.1e-64 249.2 180 66.7
Duzib106G0123 Durio zibethinus HOM05D007188 ORTHO05D009102 5.3e-64 248.8 208 63.9
TWI38G2147 Tripterygium wilfordii HOM05D007188 ORTHO05D009102 5.3e-64 248.8 172 71.5
VMungo0720G2339 Vigna mungo HOM05D007188 ORTHO05D009102 5.3e-64 248.8 163 74.8
Phvul.007G099300 Phaseolus vulgaris HOM05D007188 ORTHO05D009102 1.6e-63 247.3 183 67.8
Gohir.A05G293300 Gossypium hirsutum HOM05D007188 ORTHO05D009102 2.0e-63 246.9 148 79.1
Lsat_1_v5_gn_8_20860 Lactuca sativa HOM05D007188 ORTHO05D009102 2.7e-63 246.5 203 64.5
SalBow4G2327 Salvia bowleyana HOM05D007188 ORTHO05D009102 4.5e-63 245.7 203 61.1
HanXRQChr08g0218401 Helianthus annuus HOM05D007188 ORTHO05D009102 5.9e-63 245.4 202 62.4
Gohir.D05G294000 Gossypium hirsutum HOM05D007188 ORTHO05D009102 1.0e-62 244.6 148 78.4
MD01G1102700 Malus domestica HOM05D007188 ORTHO05D009102 1.0e-62 244.6 186 67.2
Sopen05g034000 Solanum pennellii HOM05D007188 ORTHO05D009102 1.0e-62 244.6 203 65.0
Gorai.009G310600 Gossypium raimondii HOM05D007188 ORTHO05D009102 1.3e-62 244.2 148 77.7
ECA233G0714 Erigeron canadensis HOM05D007188 ORTHO05D009102 1.7e-62 243.8 201 62.7
CANSAT56G0643 Cannabis sativa HOM05D007188 ORTHO05D009102 2.2e-62 243.4 188 66.0
Solyc05g055550.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 2.2e-62 243.4 203 64.5
CAN.G694.38 Capsicum annuum HOM05D007188 ORTHO05D009102 2.9e-62 243.0 202 62.9
FAN03G0393 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.9e-62 243.0 199 61.8
FAN01G3175 Fragaria x ananassa HOM05D007188 ORTHO05D009102 5.0e-62 242.3 181 65.7
FAN06G0953 Fragaria x ananassa HOM05D007188 ORTHO05D009102 6.5e-62 241.9 221 57.5
FAN06G2123 Fragaria x ananassa HOM05D007188 ORTHO05D009102 6.5e-62 241.9 221 57.5
PSO063G4012 Papaver somniferum HOM05D007188 ORTHO05D009102 8.5e-62 241.5 182 63.2
FAN10G2630 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.5e-61 240.7 221 57.0
PGSC0003DMG400023370 Solanum tuberosum HOM05D007188 ORTHO05D009102 2.5e-61 240.0 203 64.0
SGA_v2.0_scaffold62G21381 Striga asiatica HOM05D007188 ORTHO05D009102 5.5e-61 238.8 193 65.8
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 7.2e-61 238.4 186 64.5
Atru.chr12.855 Acer truncatum HOM05D007188 ORTHO05D009102 9.4e-61 238.0 190 66.8
arahy.Tifrunner.gnm1.ann1.3RW2WH Arachis hypogaea HOM05D007188 ORTHO05D009102 9.4e-61 238.0 166 70.5
arahy.Tifrunner.gnm1.ann1.CRM3NE Arachis hypogaea HOM05D007188 ORTHO05D009102 9.4e-61 238.0 166 70.5
Sed0000210 Sechium edule HOM05D007188 ORTHO05D009102 1.6e-60 237.3 155 72.3
Sc06g0002050 Simmondsia chinensis HOM05D007188 ORTHO05D009102 2.1e-60 236.9 143 81.1
Solyc02g033060.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 2.1e-60 236.9 197 65.0
Migut.F01952 Erythranthe guttata HOM05D007188 ORTHO05D009102 4.7e-60 235.7 166 71.7
Nitab4.5_0001760g0020 Nicotiana tabacum HOM05D007188 ORTHO05D009102 1.4e-59 234.2 199 62.3
CsaV3_5G036040 Cucumis sativus L. HOM05D007188 ORTHO05D009102 2.3e-59 233.4 155 71.0
Aqoxy1G01136 Aquilegia oxysepala HOM05D007188 ORTHO05D009102 3.0e-59 233.0 212 59.0
TPR.G10293 Trifolium pratense HOM05D007188 ORTHO05D009102 4.0e-59 232.6 197 61.4
MELO3C012404.2 Cucumis melo HOM05D007188 ORTHO05D009102 5.2e-59 232.3 155 71.6
AUR62014280 Chenopodium quinoa HOM05D007188 ORTHO05D009102 6.8e-59 231.9 165 72.7
Ca_10538_v3 Cicer arietinum L. HOM05D007188 ORTHO05D009102 1.5e-58 230.7 196 61.2
Lalb_Chr21g0313651 Lupinus albus HOM05D007188 ORTHO05D009102 2.6e-58 229.9 147 74.8
Medtr1g094160 Medicago truncatula HOM05D007188 ORTHO05D009102 3.4e-58 229.6 184 62.5
ClCG05G021230 Citrullus lanatus HOM05D007188 ORTHO05D009102 7.5e-58 228.4 161 69.6
CDE09G0470 Ceratophyllum demersum HOM05D007188 ORTHO05D009102 9.8e-58 228.0 179 60.9
Lj5g0026151 Lotus japonicus HOM05D007188 ORTHO05D009102 4.8e-57 225.7 165 66.1
Aa31LG3G3010 Aethionema arabicum HOM05D007188 ORTHO05D009102 1.1e-56 224.6 159 67.9
AL3G21760 Arabidopsis lyrata HOM05D007188 ORTHO05D009102 9.1e-56 221.5 148 70.3
Peaxi162Scf00176g01519 Petunia axillaris HOM05D007188 ORTHO05D009102 1.2e-55 221.1 214 58.9
Glyma.10G207400 Glycine max HOM05D007188 ORTHO05D009102 1.6e-55 220.7 186 61.3
unitig_88.g27814 Utricularia gibba HOM05D007188 ORTHO05D009102 2.7e-55 219.9 156 67.9
CARHR084890 Cardamine hirsuta HOM05D007188 ORTHO05D009102 5.9e-55 218.8 162 64.8
C03p44120 Brassica napus HOM05D007188 ORTHO05D009102 7.7e-55 218.4 155 66.5
Psat6g181120 Pisum sativum HOM05D007188 ORTHO05D009102 7.7e-55 218.4 163 65.6
BolC3t16687H Brassica oleracea HOM05D007188 ORTHO05D009102 2.2e-54 216.9 172 61.0
AT3G10405 Arabidopsis thaliana HOM05D007188 ORTHO05D009102 3.8e-54 216.1 148 68.9
A03p36520 Brassica napus HOM05D007188 ORTHO05D009102 5.0e-54 215.7 205 54.6
BraA03t12819Z Brassica rapa HOM05D007188 ORTHO05D009102 1.5e-53 214.2 171 60.2
Carub.0003s0959 Capsella rubella HOM05D007188 ORTHO05D009102 1.5e-53 214.2 148 68.9
Thhalv10021497m.g Eutrema salsugineum HOM05D007188 ORTHO05D009102 1.5e-53 214.2 148 68.2
Zm00001eb022660 Zea mays HOM05D007188 ORTHO05D009102 7.2e-53 211.8 178 62.4
Os10g0545100 Oryza sativa ssp. japonica HOM05D007188 ORTHO05D009102 1.2e-52 211.1 148 68.9
Sp3g08680 Schrenkiella parvula HOM05D007188 ORTHO05D009102 1.2e-52 211.1 146 67.1
THA.LOC104826897 Tarenaya hassleriana HOM05D007188 ORTHO05D009102 3.6e-52 209.5 187 59.4
Haze_16743 Corylus avellana HOM05D007188 ORTHO05D009102 3.4e-50 203.0 206 56.8
Sopen02g011440 Solanum pennellii HOM05D007188 ORTHO05D009102 5.7e-50 202.2 123 79.7
Thecc.10G085100 Theobroma cacao HOM05D007188 ORTHO05D009102 9.8e-50 201.4 156 66.7
COL.COLO4_36178 Corchorus olitorius HOM05D007188 ORTHO05D009102 1.8e-48 197.2 210 51.4
Prupe.2G208300 Prunus persica HOM05D007188 ORTHO05D009102 2.4e-48 196.8 150 66.0
vmacro04839 Vaccinium macrocarpon HOM05D007188 ORTHO05D009102 2.9e-46 189.9 144 68.8
EL10Ac4g08743 Beta vulgaris HOM05D007188 ORTHO05D009102 1.9e-45 187.2 142 67.6
BcaC01g04184 Brassica carinata HOM05D007188 ORTHO05D009102 7.3e-45 185.3 165 57.6
Pp3c2_18450 Physcomitrium patens HOM05D007188 ORTHO05D009102 1.2e-42 177.9 146 56.8
Mapoly0050s0048 Marchantia polymorpha HOM05D007188 ORTHO05D009102 5.7e-42 175.6 142 57.0
Mapoly0278s0008 Marchantia polymorpha HOM05D007188 ORTHO05D009102 5.7e-42 175.6 142 57.0
Nitab4.5_0000096g0330 Nicotiana tabacum HOM05D007188 ORTHO05D009102 7.5e-42 175.3 184 55.4
Hund14950 Selenicereus undatus HOM05D007188 ORTHO05D009102 4.6e-39 166.0 116 68.1
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 6.4e-33 145.6 141 51.1
Ciclev10033195m.g Citrus clementina HOM05D007188 ORTHO05D009102 9.2e-32 141.7 83 79.5
SMO358G0267 Selaginella moellendorffii HOM05D007188 ORTHO05D009102 1.3e-30 137.9 151 46.4
FvH4_7g18710 Fragaria vesca HOM05D007188 ORTHO05D009102 1.1e-29 134.8 142 50.7
Rhsim09G0147800 Rhododendron simsii HOM05D007188 ORTHO05D009102 6.2e-28 129.0 208 42.8
PSO339G6470 Papaver somniferum HOM05D007188 ORTHO05D009102 1.7e-25 120.9 120 51.7
RhsimUnG0185100 Rhododendron simsii HOM05D007188 ORTHO05D009102 9.2e-24 115.2 201 38.8
CBR_g28804 Chara braunii HOM05D007188 ORTHO05D009102 8.6e-22 108.6 180 35.6
SEGI_08985 Sequoiadendron giganteum HOM05D007188 ORTHO05D009102 3.3e-21 106.7 87 57.5
MCO11G330 Micromonas commoda HOM05D007188 ORTHO05D009102 8.9e-19 98.6 140 33.6
FAN10G3168 Fragaria x ananassa HOM05D007188 ORTHO05D009102 4.1e-16 89.7 115 45.2
PRCOL_00002171 Prasinoderma coloniale HOM05D007188 ORTHO05D009102 4.3e-13 79.7 137 33.6
Cre10.g464650 Chlamydomonas reinhardtii HOM05D007188 ORTHO05D009102 1.6e-12 77.8 135 30.4
AUR62034156 Chenopodium quinoa HOM05D007188 ORTHO05D009102 4.4e-10 69.7 62 59.7
Oeu034116.1 Olea europaea HOM05D007188 ORTHO05D009102 2.2e-09 67.4 44 77.3
vmacro04837 Vaccinium macrocarpon HOM05D000026 ORTHO05D000094 6.4e-09 65.9 44 72.7
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 4.2e-08 63.2 44 68.2
VMungo1080G0524 Vigna mungo HOM05D007188 ORTHO05D008722 7.8e-07 58.9 32 84.4
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 1.0e-06 58.5 49 49.0


User provided reference genes

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