Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007230 Camellia sinensis var. sinensis HOM05D005487 ORTHO05D007280 1.5e-244 849.0 399 100.0
CSS0007892 Camellia sinensis var. sinensis HOM05D005487 ORTHO05D007280 2.1e-185 652.5 440 76.6
QL05p069756 Quercus lobata HOM05D005487 ORTHO05D007280 6.9e-173 610.9 439 71.3
Rhsim13G0146300 Rhododendron simsii HOM05D005487 ORTHO05D007280 3.0e-168 595.5 467 66.2
Actinidia26862 Actinidia chinensis HOM05D005487 ORTHO05D007280 4.3e-167 591.7 437 68.6
RhsimUnG0109400 Rhododendron simsii HOM05D005487 ORTHO05D007280 4.8e-166 588.2 467 65.5
Manes.09G070300 Manihot esculenta HOM05D005487 ORTHO05D007280 8.2e-166 587.4 437 67.5
Nn1g07355 Nelumbo nucifera HOM05D005487 ORTHO05D007280 9.0e-165 583.9 440 67.3
Actinidia11881 Actinidia chinensis HOM05D005487 ORTHO05D007280 3.4e-164 582.0 437 67.7
Hma1.2p1_0135F.1_g061730 Hydrangea macrophylla HOM05D005487 ORTHO05D007280 3.4e-164 582.0 438 67.8
Potri.006G009200 Populus trichocarpa HOM05D005487 ORTHO05D007280 1.0e-163 580.5 438 67.6
CiPaw.10G077700 Carya illinoinensis HOM05D005487 ORTHO05D007280 1.7e-163 579.7 437 66.4
Oeu044422.1 Olea europaea HOM05D005487 ORTHO05D007280 2.2e-163 579.3 438 67.1
Cfa000109 Carpinus fangiana HOM05D005487 ORTHO05D007280 1.1e-162 577.0 437 67.0
TAR629G3393 Trochodendron aralioides HOM05D005487 ORTHO05D007280 1.9e-162 576.2 440 65.7
TAR724G0004 Trochodendron aralioides HOM05D005487 ORTHO05D007280 7.2e-162 574.3 440 65.5
Lj2C262G3 Lonicera japonica HOM05D005487 ORTHO05D007280 1.2e-161 573.5 432 68.1
Atru.chr1.2460 Acer truncatum HOM05D005487 ORTHO05D007280 3.6e-161 572.0 438 67.1
FvH4_3g01030 Fragaria vesca HOM05D005487 ORTHO05D007280 3.6e-161 572.0 438 67.1
HanXRQChr10g0284101 Helianthus annuus HOM05D005487 ORTHO05D007280 4.6e-161 571.6 439 67.0
MD10G1331100 Malus domestica HOM05D005487 ORTHO05D007280 1.4e-160 570.1 438 66.4
RcHm_v2.0_Chr5g0001571 Rosa chinensis HOM05D005487 ORTHO05D007280 1.4e-160 570.1 436 67.0
Nn1g03329 Nelumbo nucifera HOM05D005487 ORTHO05D007280 1.1e-159 567.0 440 65.5
Prupe.4G011100 Prunus persica HOM05D005487 ORTHO05D007280 1.1e-159 567.0 438 66.0
Ciclev10015367m.g Citrus clementina HOM05D005487 ORTHO05D007280 1.5e-159 566.6 437 67.0
Duzib192G1033 Durio zibethinus HOM05D005487 ORTHO05D007280 7.4e-159 564.3 436 65.4
FAN21G2054 Fragaria x ananassa HOM05D005487 ORTHO05D007280 7.4e-159 564.3 438 66.7
Cc09_g00910 Coffea canephora HOM05D005487 ORTHO05D007280 2.8e-158 562.4 437 65.9
Thecc.06G232800 Theobroma cacao HOM05D005487 ORTHO05D007280 1.4e-157 560.1 437 65.2
GSVIVG01003351001 Vitis vinifera HOM05D005487 ORTHO05D007280 1.8e-157 559.7 437 64.8
PGR004G0814 Punica granatum HOM05D005487 ORTHO05D007280 4.1e-157 558.5 438 64.8
Dinv07399 Davidia involucrata HOM05D005487 ORTHO05D007280 5.3e-157 558.1 419 67.8
Nitab4.5_0000143g0260 Nicotiana tabacum HOM05D005487 ORTHO05D007280 9.1e-157 557.4 438 65.1
TWI38G0871 Tripterygium wilfordii HOM05D005487 ORTHO05D007280 1.2e-156 557.0 438 65.5
Gohir.A06G205600 Gossypium hirsutum HOM05D005487 ORTHO05D007280 1.0e-155 553.9 436 64.7
CANSAT56G2574 Cannabis sativa HOM05D005487 ORTHO05D007280 2.2e-155 552.7 436 63.5
arahy.Tifrunner.gnm1.ann1.8PBE23 Arachis hypogaea HOM05D005487 ORTHO05D007280 2.9e-155 552.4 437 62.7
MBI19_g29429_MAGBIO Magnolia biondii HOM05D005487 ORTHO05D007280 5.0e-155 551.6 437 62.7
Cpa.g.sc75.119 Carica papaya HOM05D005487 ORTHO05D007280 6.5e-155 551.2 437 63.2
Nitab4.5_0001198g0060 Nicotiana tabacum HOM05D005487 ORTHO05D007280 6.5e-155 551.2 438 64.6
EL10Ac8g20177 Beta vulgaris HOM05D005487 ORTHO05D007280 8.5e-155 550.8 439 64.7
Lsat_1_v5_gn_8_64401 Lactuca sativa HOM05D005487 ORTHO05D007280 8.5e-155 550.8 443 65.5
COL.COLO4_31878 Corchorus olitorius HOM05D005487 ORTHO05D007280 1.4e-154 550.1 440 63.9
vmacro03645 Vaccinium macrocarpon HOM05D005487 ORTHO05D007280 1.4e-154 550.1 423 68.3
arahy.Tifrunner.gnm1.ann1.61KG5W Arachis hypogaea HOM05D005487 ORTHO05D007280 2.5e-154 549.3 437 62.5
Gorai.010G250300 Gossypium raimondii HOM05D005487 ORTHO05D007280 9.4e-154 547.4 436 64.0
AUR62021869 Chenopodium quinoa HOM05D005487 ORTHO05D007280 2.1e-153 546.2 437 65.4
Gohir.D06G215900 Gossypium hirsutum HOM05D005487 ORTHO05D007280 2.1e-153 546.2 436 63.5
Psat1g176520 Pisum sativum HOM05D005487 ORTHO05D007280 4.7e-153 545.0 435 61.1
SalBow8G2024 Salvia bowleyana HOM05D005487 ORTHO05D007280 4.7e-153 545.0 437 63.8
Sed0025030 Sechium edule HOM05D005487 ORTHO05D007280 4.7e-153 545.0 440 63.2
Peaxi162Scf00442g00414 Petunia axillaris HOM05D005487 ORTHO05D007280 7.9e-153 544.3 475 58.7
PSO764G0115 Papaver somniferum HOM05D005487 ORTHO05D007280 1.0e-152 543.9 437 62.7
Sopen04g006840 Solanum pennellii HOM05D005487 ORTHO05D007280 1.4e-152 543.5 438 63.0
Lalb_Chr15g0087971 Lupinus albus HOM05D005487 ORTHO05D007280 1.8e-152 543.1 438 61.9
Peaxi162Scf00558g00518 Petunia axillaris HOM05D005487 ORTHO05D007280 2.3e-152 542.7 478 60.3
Ca_00719_v3 Cicer arietinum L. HOM05D005487 ORTHO05D007280 3.0e-152 542.3 434 60.8
MSTRG.16025 Avicennia marina HOM05D005487 ORTHO05D007280 3.9e-152 542.0 438 62.8
Sopen11g006950 Solanum pennellii HOM05D005487 ORTHO05D007280 3.9e-152 542.0 440 62.0
Solyc11g012160.2 Solanum lycopersicum HOM05D005487 ORTHO05D007280 6.7e-152 541.2 440 61.6
PSO210G3736 Papaver somniferum HOM05D005487 ORTHO05D007280 1.1e-151 540.4 436 62.2
TPR.G13057 Trifolium pratense HOM05D005487 ORTHO05D007280 2.0e-151 539.7 437 60.6
CAN.G1186.29 Capsicum annuum HOM05D005487 ORTHO05D007280 9.7e-151 537.3 441 63.5
Gohir.A05G174500 Gossypium hirsutum HOM05D005487 ORTHO05D007280 1.3e-150 537.0 436 63.8
PGSC0003DMG400023608 Solanum tuberosum HOM05D005487 ORTHO05D007280 1.7e-150 536.6 438 62.3
THA.LOC104809472 Tarenaya hassleriana HOM05D005487 ORTHO05D007280 6.3e-150 534.6 435 62.5
VMungo0540G1792 Vigna mungo HOM05D005487 ORTHO05D007280 8.2e-150 534.3 437 60.2
ClCG01G021500 Citrullus lanatus HOM05D005487 ORTHO05D007280 1.4e-149 533.5 439 62.6
Medtr2g025640 Medicago truncatula HOM05D005487 ORTHO05D007280 2.4e-149 532.7 436 60.1
CAN.G1263.14 Capsicum annuum HOM05D005487 ORTHO05D007280 4.1e-149 531.9 439 62.2
Gorai.009G182900 Gossypium raimondii HOM05D005487 ORTHO05D007280 4.1e-149 531.9 436 63.1
Eucgr.L00543 Eucalyptus grandis HOM05D005487 ORTHO05D007280 9.1e-149 530.8 471 58.4
Gohir.D05G177500 Gossypium hirsutum HOM05D005487 ORTHO05D007280 1.2e-148 530.4 436 62.8
MELO3C007433.2 Cucumis melo HOM05D005487 ORTHO05D007280 1.5e-148 530.0 439 62.2
BcaB02g06431 Brassica carinata HOM05D005487 ORTHO05D007280 4.5e-148 528.5 436 61.7
Lj6g0015557 Lotus japonicus HOM05D005487 ORTHO05D007280 7.7e-148 527.7 434 61.3
Phvul.006G143500 Phaseolus vulgaris HOM05D005487 ORTHO05D007280 7.7e-148 527.7 437 59.0
AL1G23300 Arabidopsis lyrata HOM05D005487 ORTHO05D007280 1.0e-147 527.3 436 62.2
AT1G12050 Arabidopsis thaliana HOM05D005487 ORTHO05D007280 1.0e-147 527.3 436 62.2
FAN25G0861 Fragaria x ananassa HOM05D005487 ORTHO05D007280 1.3e-147 526.9 416 66.3
Glyma.15G114300 Glycine max HOM05D005487 ORTHO05D007280 1.3e-147 526.9 437 59.5
CsaV3_6G048520 Cucumis sativus L. HOM05D005487 ORTHO05D007280 2.2e-147 526.2 437 62.2
Solyc04g014730.4 Solanum lycopersicum HOM05D005487 ORTHO05D007280 2.2e-147 526.2 431 61.7
HPP92_027542 Vanilla planifolia HOM05D005487 ORTHO05D007280 2.9e-147 525.8 445 59.8
BolC5t29858H Brassica oleracea HOM05D005487 ORTHO05D007280 5.0e-147 525.0 435 61.4
Thhalv10007724m.g Eutrema salsugineum HOM05D005487 ORTHO05D007280 5.0e-147 525.0 435 61.6
Sp1g10720 Schrenkiella parvula HOM05D005487 ORTHO05D007280 8.5e-147 524.2 435 61.6
Glyma.09G010000 Glycine max HOM05D005487 ORTHO05D007280 1.9e-146 523.1 437 60.4
AUR62012785 Chenopodium quinoa HOM05D005487 ORTHO05D007280 2.5e-146 522.7 399 67.9
Aa31LG1G2680 Aethionema arabicum HOM05D005487 ORTHO05D007280 5.5e-146 521.5 435 60.7
Aqoxy1G04106 Aquilegia oxysepala HOM05D005487 ORTHO05D007280 1.2e-145 520.4 441 61.9
HPP92_003014 Vanilla planifolia HOM05D005487 ORTHO05D007280 1.2e-145 520.4 444 58.8
Carub.0001s1173 Capsella rubella HOM05D005487 ORTHO05D007280 2.1e-145 519.6 435 61.4
DCAR_027826 Daucus carota HOM05D005487 ORTHO05D007280 6.1e-145 518.1 421 63.4
ATR1101G021 Amborella trichopoda HOM05D005487 ORTHO05D007280 1.0e-144 517.3 441 60.5
CARHR012410 Cardamine hirsuta HOM05D005487 ORTHO05D007280 1.8e-144 516.5 435 60.9
Haze_06917 Corylus avellana HOM05D005487 ORTHO05D007280 3.3e-143 512.3 382 68.1
PGSC0003DMG400013273 Solanum tuberosum HOM05D005487 ORTHO05D007280 3.3e-143 512.3 523 52.8
Haze_06922 Corylus avellana HOM05D005487 ORTHO05D007280 6.3e-142 508.1 382 67.8
Hund23409 Selenicereus undatus HOM05D005487 ORTHO05D007280 2.0e-140 503.1 413 62.0
SGA_v2.0_scaffold7G03757 Striga asiatica HOM05D005487 ORTHO05D007280 4.5e-140 501.9 448 59.8
BcaC05g25225 Brassica carinata HOM05D005487 ORTHO05D007280 5.5e-138 495.0 421 60.3
C05p11110 Brassica napus HOM05D005487 ORTHO05D007280 2.7e-137 492.7 421 60.1
Os02g0196800 Oryza sativa ssp. japonica HOM05D005487 ORTHO05D007280 2.7e-137 492.7 439 55.4
BraA06t24129Z Brassica rapa HOM05D005487 ORTHO05D007280 1.4e-136 490.3 417 60.4
A06p09440 Brassica napus HOM05D005487 ORTHO05D007280 1.8e-136 490.0 417 60.4
CDE07G0927 Ceratophyllum demersum HOM05D005487 ORTHO05D007280 7.5e-135 484.6 452 56.2
Sabra06G0007000 Salix brachista HOM05D005487 ORTHO05D007280 7.5e-135 484.6 421 61.0
Zm00001eb236160 Zea mays HOM05D005487 ORTHO05D007280 2.4e-133 479.6 437 54.7
unitig_0.g999 Utricularia gibba HOM05D005487 ORTHO05D007280 1.8e-128 463.4 372 61.3
Duzib235G0086 Durio zibethinus HOM05D005487 ORTHO05D007280 1.2e-124 450.7 390 60.3
Sc17g0007720 Simmondsia chinensis HOM05D005487 ORTHO05D007280 1.5e-122 443.7 319 69.6
Zm00001eb205930 Zea mays HOM05D005487 ORTHO05D007280 4.9e-118 428.7 358 58.4
Pp3c4_7990 Physcomitrium patens HOM05D005487 ORTHO05D007280 5.0e-115 418.7 439 50.8
Migut.M01391 Erythranthe guttata HOM05D005487 ORTHO05D007280 1.6e-113 413.7 440 52.7
Mapoly0022s0035 Marchantia polymorpha HOM05D005487 ORTHO05D007280 2.1e-113 413.3 436 49.8
SMO137G0224 Selaginella moellendorffii HOM05D005487 ORTHO05D007280 6.2e-113 411.8 435 50.8
Ah.09g234260 Amaranthus hybridus HOM05D005487 ORTHO05D007280 1.9e-109 400.2 430 53.5
AagrBONN_evm.TU.Sc2ySwM_344.3343 Anthoceros agrestis HOM05D005487 ORTHO05D007280 2.4e-109 399.8 436 49.5
RcHm_v2.0_Chr3g0477951 Rosa chinensis HOM05D005487 ORTHO05D007280 3.9e-107 392.5 463 49.0
Pp3c13_16620 Physcomitrium patens HOM05D005487 ORTHO05D007280 7.3e-106 388.3 358 54.7
ECA236G3803 Erigeron canadensis HOM05D005487 ORTHO05D007280 3.1e-104 382.9 235 77.0
RcHm_v2.0_Chr3g0484131 Rosa chinensis HOM05D005487 ORTHO05D007280 2.6e-103 379.8 459 48.8
Haze_26411 Corylus avellana HOM05D005487 ORTHO05D007280 1.4e-93 347.4 443 42.0
CBR_g46703 Chara braunii HOM05D005487 ORTHO05D007280 1.2e-89 334.3 475 41.3
Cre17.g732802 Chlamydomonas reinhardtii HOM05D005487 ORTHO05D007280 1.3e-83 314.3 471 41.2
PRCOL_00001448 Prasinoderma coloniale HOM05D005487 ORTHO05D007280 6.0e-76 288.9 378 43.4
Gorai.001G209700 Gossypium raimondii HOM05D005487 ORTHO05D007280 2.2e-25 120.9 134 50.0
Gohir.D07G188750 Gossypium hirsutum HOM05D005487 ORTHO05D007280 5.5e-21 106.3 134 44.0
RcHm_v2.0_Chr5g0003621 Rosa chinensis HOM05D005487 ORTHO05D007280 5.5e-21 106.3 101 55.4
COL.COLO4_27266 Corchorus olitorius HOM05D000025 ORTHO05D000040 4.7e-20 103.2 123 48.8
C06p15210 Brassica napus HOM05D005487 ORTHO05D042797 9.1e-16 89.0 95 48.4
BolC6t36696H Brassica oleracea HOM05D005487 ORTHO05D042797 9.1e-16 89.0 95 48.4
SEGI_36702 Sequoiadendron giganteum HOM05D005487 ORTHO05D007280 1.0e-14 85.5 92 50.0
Gohir.D13G151750 Gossypium hirsutum HOM05D005487 ORTHO05D007280 7.5e-10 69.3 55 61.8
BcaC08g44100 Brassica carinata HOM05D005487 ORTHO05D027150 9.2e-08 62.4 38 65.8
C09p25260 Brassica napus HOM05D005487 ORTHO05D027150 2.7e-07 60.8 40 65.0
BcaC04g21976 Brassica carinata HOM05D005487 ORTHO05D027150 3.5e-07 60.5 40 67.5
BolC9t55424H Brassica oleracea HOM05D005487 ORTHO05D027150 5.9e-07 59.7 40 65.0


User provided reference genes

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