Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007197 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 8.0e-233 810.1 410 100.0
CSS0014159 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.5e-227 790.4 410 97.1
CSS0000071 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.2e-224 780.8 399 98.5
CSS0044892 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.0e-220 768.8 405 96.3
CSS0049789 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.5e-218 762.7 410 94.9
CSS0010049 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.2e-216 754.2 410 94.1
CSS0046859 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.4e-213 744.2 389 97.2
CSS0011758 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.1e-209 730.7 409 91.0
CSS0048122 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 8.3e-206 720.3 405 89.9
CSS0001042 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 8.6e-86 321.6 180 83.9
CSS0038750 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.2e-52 209.1 417 34.3
CSS0006787 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.3e-51 206.1 418 33.0
CSS0003731 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 9.0e-51 205.3 418 33.0
CSS0037609 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 9.0e-51 205.3 418 32.8
CSS0013786 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.2e-50 204.9 418 33.5
CSS0007760 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.0e-50 204.1 418 33.5
CSS0012255 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.0e-50 204.1 418 33.5
CSS0029408 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.4e-50 203.4 426 33.1
CSS0018878 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.5e-50 203.0 417 33.6
CSS0002114 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 7.6e-50 202.2 410 33.7
CSS0035720 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.9e-49 200.3 425 32.2
CSS0026285 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.8e-49 199.9 417 32.9
CSS0022638 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.1e-48 198.4 425 32.0
CSS0029919 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.5e-47 193.4 417 32.4
CSS0018155 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.9e-46 189.9 337 34.4
CSS0023104 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.9e-46 189.9 337 34.7
CSS0034950 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.9e-46 189.9 337 34.4
CSS0040322 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.9e-46 189.9 337 34.4
CSS0046417 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.9e-46 189.9 337 34.4
CSS0006283 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.7e-46 189.1 337 34.4
CSS0006218 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 8.7e-46 188.7 337 34.7
Dinv02273 Davidia involucrata HOM05D008484 ORTHO05D007523 1.6e-39 167.9 364 32.4
Rhsim06G0054100 Rhododendron simsii HOM05D017774 ORTHO05D013099 2.2e-33 147.5 358 29.3
TWI14G1239 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 1.3e-30 138.3 413 27.1
TWI23G0081 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 1.3e-30 138.3 413 27.1
CSS0004408 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.9e-29 134.4 453 28.3
Rhsim05G0009200 Rhododendron simsii HOM05D007376 ORTHO05D007523 5.7e-29 132.9 407 28.3
Dinv07248 Davidia involucrata HOM05D008484 ORTHO05D007523 7.4e-29 132.5 184 36.4
CSS0009315 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.6e-28 131.3 453 28.0
CSS0047960 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.7e-28 130.2 396 26.3
CSS0008852 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 8.2e-28 129.0 321 29.9
Rhsim04G0195400 Rhododendron simsii HOM05D007376 ORTHO05D007523 3.1e-27 127.1 412 27.4
TWI59G0944 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 7.7e-26 122.5 407 27.3
CSS0000781 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 1.0e-25 122.1 329 28.6
CSS0050301 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 1.7e-25 121.3 330 28.2
CSS0047144 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.9e-24 117.9 393 27.0
CSS0009580 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 4.2e-24 116.7 329 28.0
CSS0039395 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 9.4e-24 115.5 333 28.8
CSS0012098 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 1.6e-23 114.8 329 27.7
CSS0050518 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 4.6e-23 113.2 246 30.5
CSS0030799 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 7.9e-23 112.5 454 26.0
Rhsim03G0108200 Rhododendron simsii HOM05D008484 ORTHO05D007523 1.8e-22 111.3 375 28.3
CSS0034277 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 3.9e-22 110.2 442 27.8
vmacro14386 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.5e-21 107.5 396 24.7
Dinv07454 Davidia involucrata HOM05D008484 ORTHO05D007523 3.3e-21 107.1 195 32.3
CSS0038166 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 1.7e-20 104.8 258 26.7
vmacro00756 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 2.8e-20 104.0 383 25.6
CSS0003651 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.8e-20 103.2 401 26.7
CSS0029864 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 4.8e-20 103.2 403 25.8
CSS0018852 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 8.2e-20 102.4 266 27.8
CSS0022103 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 2.4e-19 100.9 275 27.6
CSS0032852 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 4.1e-19 100.1 432 25.7
CSS0030880 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.5e-18 98.2 378 25.9
CSS0030886 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 2.0e-18 97.8 399 24.1
CSS0026649 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.4e-18 97.1 205 32.2
Rhsim04G0033200 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.9e-18 96.3 251 25.9
RhsimUnG0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.9e-18 96.3 251 25.9
RhsimUnG0145500 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.9e-18 96.3 251 25.9
CSS0013773 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 7.7e-18 95.9 205 31.7
CSS0040996 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 7.7e-18 95.9 312 24.7
CSS0043631 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 1.0e-17 95.5 338 24.9
CSS0005845 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.3e-17 95.1 157 34.4
CSS0037995 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 1.7e-17 94.7 327 26.9
CSS0024257 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.2e-17 94.4 157 35.0
vmacro09690 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.9e-17 94.0 333 25.8
Rhsim13G0177800 Rhododendron simsii HOM05D008484 ORTHO05D007523 6.5e-17 92.8 420 24.8
vmacro19839 Vaccinium macrocarpon HOM05D008484 ORTHO05D007523 6.5e-17 92.8 228 29.4
RhsimUnG0025400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.4e-16 91.7 408 23.5
Rhsim08G0213000 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.5e-16 89.7 351 26.2
RhsimUnG0058200 Rhododendron simsii HOM05D007376 ORTHO05D007523 7.2e-16 89.4 410 23.2
RhsimUnG0232600 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-15 88.2 352 27.3
CSS0010228 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 4.7e-15 86.7 341 24.3
TWI38G0209 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 4.7e-15 86.7 169 36.7
CSS0034164 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 6.1e-15 86.3 306 26.5
vmacro17715 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 1.0e-14 85.5 190 31.1
CSS0020586 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.4e-14 85.1 387 23.0
CSS0043583 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 1.4e-14 85.1 164 29.9
FvH4_2g10140 Fragaria vesca HOM05D012588 ORTHO05D001590 6.7e-14 82.8 305 24.3
CSS0028075 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D112595 1.1e-13 82.0 317 24.9
Rhsim01G0158000 Rhododendron simsii HOM05D017361 ORTHO05D007523 1.1e-13 82.0 128 33.6
RcHm_v2.0_Chr6g0266141 Rosa chinensis HOM05D012588 ORTHO05D001590 1.5e-13 81.6 384 24.2
vmacro23365 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 1.5e-13 81.6 215 28.4
CSS0021465 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.0e-13 81.3 320 24.1
CSS0022760 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.6e-13 80.9 349 23.2
CSS0030913 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D110203 3.3e-13 80.5 292 25.7
CSS0030923 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 3.3e-13 80.5 167 29.3
CSS0045699 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 3.3e-13 80.5 167 29.3
CSS0024354 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 7.4e-13 79.3 339 23.9
CSS0030123 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 9.7e-13 79.0 346 22.3
CSS0036762 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 9.7e-13 79.0 294 25.9
CSS0018760 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 1.3e-12 78.6 198 30.8
CSS0011419 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.2e-12 77.8 159 32.1
CSS0027262 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 3.7e-12 77.0 372 24.7
FAN15G1451 Fragaria x ananassa HOM05D012588 ORTHO05D001590 3.7e-12 77.0 314 22.6
CSS0008783 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.1e-11 75.5 316 23.1
FvH4_3g25201 Fragaria vesca HOM05D003258 ORTHO05D010059 1.8e-11 74.7 340 24.1
vmacro23477 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 3.1e-11 73.9 100 35.0
Rhsim09G0061900 Rhododendron simsii HOM05D027677 ORTHO05D338825 7.0e-11 72.8 75 38.7
RcHm_v2.0_Chr6g0266151 Rosa chinensis HOM05D012588 ORTHO05D001590 7.0e-11 72.8 450 22.4
RhsimUnG0192900 Rhododendron simsii HOM05D017774 ORTHO05D013099 9.1e-11 72.4 77 42.9
Rhsim01G0161300 Rhododendron simsii HOM05D027677 ORTHO05D339865 1.2e-10 72.0 62 45.2
Dinv04550 Davidia involucrata HOM05D000065 ORTHO05D000162 1.6e-10 71.6 220 28.6
FvH4_4g04830 Fragaria vesca HOM05D003258 ORTHO05D010103 1.6e-10 71.6 335 23.6
FvH4_6g39110 Fragaria vesca HOM05D003258 ORTHO05D010103 3.5e-10 70.5 335 23.6
Rhsim12G0049900 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.9e-09 67.4 307 21.8
Rhsim01G0036600 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.8e-09 67.0 423 21.0
Rhsim05G0055800 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.5e-09 66.2 332 23.8
Rhsim06G0208800 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.5e-09 66.2 332 23.8
Rhsim09G0062700 Rhododendron simsii HOM05D027677 ORTHO05D338544 6.5e-09 66.2 59 42.4
Rhsim02G0150000 Rhododendron simsii HOM05D017774 ORTHO05D013099 8.5e-09 65.9 135 30.4
TWI38G2357 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 8.5e-09 65.9 100 41.0
CSS0009122 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D109114 1.1e-08 65.5 274 26.3
CSS0040832 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D109556 1.1e-08 65.5 308 22.1
MD10G1135600 Malus domestica HOM05D001313 ORTHO05D001590 1.1e-08 65.5 364 22.8
RcHm_v2.0_Chr1g0358931 Rosa chinensis HOM05D003258 ORTHO05D010059 1.1e-08 65.5 144 30.6
FAN18G2768 Fragaria x ananassa HOM05D011367 ORTHO05D001590 1.9e-08 64.7 159 27.7
vmacro05225 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 3.2e-08 63.9 264 22.3
CSS0028748 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D110352 5.5e-08 63.2 232 24.6
CSS0025792 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D109058 9.4e-08 62.4 434 23.7
CSS0001885 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.2e-07 62.0 115 32.2
CSS0027797 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.2e-07 62.0 115 32.2
CSS0028780 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.2e-07 62.0 115 32.2
FAN04G3025 Fragaria x ananassa HOM05D003258 ORTHO05D010059 1.2e-07 62.0 164 28.0
CSS0004606 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.6e-07 61.6 115 32.2
CSS0033748 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.6e-07 61.6 115 32.2
CSS0050368 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D112446 1.6e-07 61.6 314 24.2
RhsimUnG0042600 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-07 61.6 461 21.5
Rhsim01G0025600 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.7e-07 60.8 146 27.4
CSS0006796 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.6e-07 60.5 94 37.2
CSS0006459 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.7e-07 60.1 82 37.8
FvH4_7g04250 Fragaria vesca HOM05D003258 ORTHO05D010059 4.7e-07 60.1 241 24.9
FvH4_7g04380 Fragaria vesca HOM05D003258 ORTHO05D010059 4.7e-07 60.1 165 26.7
vmacro00666 Vaccinium macrocarpon HOM05D007376 ORTHO05D026098 4.7e-07 60.1 414 22.9
vmacro01212 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 4.7e-07 60.1 127 29.9
CSS0034588 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 6.1e-07 59.7 120 35.8
CSS0003389 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 8.0e-07 59.3 98 38.8
CSS0008269 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D109135 1.0e-06 58.9 140 27.1
CSS0032142 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.4e-06 58.5 98 38.8
CSS0020556 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.8e-06 58.2 94 36.2
FvH4_3g24490 Fragaria vesca HOM05D003258 ORTHO05D010059 1.8e-06 58.2 165 26.1
FvH4_3g33780 Fragaria vesca HOM05D003258 ORTHO05D010059 1.8e-06 58.2 165 26.1
CSS0044012 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D108943 2.3e-06 57.8 220 25.0
CSS0047379 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.3e-06 57.8 94 38.3
FvH4_4g09870 Fragaria vesca HOM05D003258 ORTHO05D010059 3.0e-06 57.4 165 26.1
Rhsim02G0182500 Rhododendron simsii HOM05D007376 ORTHO05D026098 4.0e-06 57.0 263 26.6
CSS0013888 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 5.2e-06 56.6 115 31.3
CSS0045406 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D111373 5.2e-06 56.6 222 24.3
CSS0047074 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 5.2e-06 56.6 117 33.3
FvH4_6g36690 Fragaria vesca HOM05D003258 ORTHO05D010059 5.2e-06 56.6 165 25.5
Rhsim02G0013800 Rhododendron simsii HOM05D007376 ORTHO05D026098 5.2e-06 56.6 263 26.6
Rhsim12G0031000 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.2e-06 56.6 124 23.4
Rhsim13G0048400 Rhododendron simsii HOM05D007376 ORTHO05D026098 5.2e-06 56.6 263 26.6
RhsimUnG0155300 Rhododendron simsii HOM05D007376 ORTHO05D026098 5.2e-06 56.6 263 26.6
CSS0007091 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D109861 6.7e-06 56.2 220 24.1
CSS0032655 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D112617 8.8e-06 55.8 172 26.7


User provided reference genes

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