Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007190 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D022135 1.2e-58 229.6 110 100.0
CSS0008993 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D022135 3.4e-53 211.5 110 91.8
CSS0033904 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D022135 1.7e-49 199.1 110 90.0
CSS0048741 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D022135 3.7e-44 181.4 101 89.1
CSS0046742 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D022135 8.3e-44 180.3 110 83.6
CSS0038232 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D001022 1.6e-42 176.0 109 79.8
CSS0044750 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D001022 1.6e-42 176.0 96 87.5
Dinv34774 Davidia involucrata HOM05D000690 ORTHO05D001022 5.4e-19 97.8 101 56.4
Dinv32913 Davidia involucrata HOM05D000690 ORTHO05D001022 1.6e-18 96.3 106 53.8
TAR365G1196 Trochodendron aralioides HOM05D000690 ORTHO05D001022 7.3e-16 87.4 92 53.3
Rhsim01G0273400 Rhododendron simsii HOM05D000690 ORTHO05D001022 6.2e-15 84.3 113 47.8
Actinidia24907 Actinidia chinensis HOM05D000690 ORTHO05D001022 1.2e-13 80.1 99 50.5
Nn6g34094 Nelumbo nucifera HOM05D000690 ORTHO05D001022 1.5e-13 79.7 103 46.6
QL12p021077 Quercus lobata HOM05D000690 ORTHO05D001022 4.4e-13 78.2 106 48.1
Duzib138G1276 Durio zibethinus HOM05D000690 ORTHO05D001022 2.2e-12 75.9 107 48.6
Thecc.01G275400 Theobroma cacao HOM05D000690 ORTHO05D001022 2.2e-12 75.9 108 47.2
Cfa006164 Carpinus fangiana HOM05D000690 ORTHO05D001022 3.8e-12 75.1 103 44.7
Hma1.2p1_0667F.1_g199720 Hydrangea macrophylla HOM05D000690 ORTHO05D001022 3.8e-12 75.1 101 46.5
TAR633G0554 Trochodendron aralioides HOM05D000690 ORTHO05D001022 3.8e-12 75.1 92 46.7
CiPaw.07G089900 Carya illinoinensis HOM05D000690 ORTHO05D001022 6.4e-12 74.3 106 47.2
Haze_04686 Corylus avellana HOM05D000690 ORTHO05D001022 8.4e-12 73.9 104 46.2
TAR362G0245 Trochodendron aralioides HOM05D000690 ORTHO05D001022 1.4e-11 73.2 103 46.6
Duzib211G0670 Durio zibethinus HOM05D000690 ORTHO05D001022 2.4e-11 72.4 107 46.7
Nn1g06216 Nelumbo nucifera HOM05D000690 ORTHO05D001022 4.2e-11 71.6 103 45.6
Hund09504 Selenicereus undatus HOM05D000690 ORTHO05D001022 5.4e-11 71.2 105 43.8
MSTRG.21547 Avicennia marina HOM05D000690 ORTHO05D001022 7.1e-11 70.9 74 55.4
Cfa011182 Carpinus fangiana HOM05D000690 ORTHO05D001022 7.1e-11 70.9 102 45.1
Haze_00880 Corylus avellana HOM05D000690 ORTHO05D001022 9.3e-11 70.5 102 45.1
RcHm_v2.0_Chr6g0290641 Rosa chinensis HOM05D000690 ORTHO05D001022 9.3e-11 70.5 108 46.3
Actinidia00779 Actinidia chinensis HOM05D000690 ORTHO05D001022 1.2e-10 70.1 83 49.4
Nn1g02358 Nelumbo nucifera HOM05D000690 ORTHO05D001022 1.2e-10 70.1 103 44.7
Prupe.8G238300 Prunus persica HOM05D000690 ORTHO05D001022 1.2e-10 70.1 105 44.8
GSVIVG01001173001 Vitis vinifera HOM05D000690 ORTHO05D001022 1.2e-10 70.1 104 44.2
Lju41C26G6 Lonicera japonica HOM05D000690 ORTHO05D001022 2.7e-10 68.9 92 47.8
Dinv14007 Davidia involucrata HOM05D000690 ORTHO05D001022 3.5e-10 68.6 96 41.7
CiPaw.01G167900 Carya illinoinensis HOM05D000690 ORTHO05D001022 6.0e-10 67.8 102 43.1
Hund27938 Selenicereus undatus HOM05D000690 ORTHO05D001022 1.0e-09 67.0 108 42.6
MD11G1282700 Malus domestica HOM05D000690 ORTHO05D001022 1.3e-09 66.6 106 45.3
Duzib133G1531 Durio zibethinus HOM05D000690 ORTHO05D001022 1.7e-09 66.2 110 43.6
Hund02827 Selenicereus undatus HOM05D000690 ORTHO05D001022 1.7e-09 66.2 108 41.7
Sabra05G0161600 Salix brachista HOM05D000690 ORTHO05D001022 3.0e-09 65.5 105 39.0
SalBow6G0182 Salvia bowleyana HOM05D000690 ORTHO05D001022 3.9e-09 65.1 80 50.0
CSS0047845 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D001022 5.1e-09 64.7 57 63.2
MSTRG.17455 Avicennia marina HOM05D000690 ORTHO05D001022 6.6e-09 64.3 74 50.0
Rhsim02G0026200 Rhododendron simsii HOM05D000690 ORTHO05D001022 6.6e-09 64.3 93 44.1
SalBow4G1715 Salvia bowleyana HOM05D000690 ORTHO05D001022 6.6e-09 64.3 99 45.5
FvH4_2g23270 Fragaria vesca HOM05D000690 ORTHO05D001022 8.7e-09 63.9 108 45.4
Sabra02G0041500 Salix brachista HOM05D000690 ORTHO05D001022 8.7e-09 63.9 105 41.0
Actinidia08485 Actinidia chinensis HOM05D000690 ORTHO05D001022 1.5e-08 63.2 98 42.9
Gorai.007G138400 Gossypium raimondii HOM05D000690 ORTHO05D001022 1.5e-08 63.2 107 43.9
FAN15G2082 Fragaria x ananassa HOM05D000690 ORTHO05D001022 1.9e-08 62.8 108 45.4
FAN20G1467 Fragaria x ananassa HOM05D000690 ORTHO05D001022 1.9e-08 62.8 108 44.4
FAN27G0350 Fragaria x ananassa HOM05D000690 ORTHO05D001022 1.9e-08 62.8 109 45.0
Gohir.D11G129400 Gossypium hirsutum HOM05D000690 ORTHO05D001022 1.9e-08 62.8 107 43.9
PSO761G0687 Papaver somniferum HOM05D000690 ORTHO05D001022 2.5e-08 62.4 98 41.8
SalBow3G1058 Salvia bowleyana HOM05D000690 ORTHO05D001022 2.5e-08 62.4 87 40.2
MSTRG.18247 Avicennia marina HOM05D000690 ORTHO05D001022 3.3e-08 62.0 105 42.9
Gohir.A11G124200 Gossypium hirsutum HOM05D000690 ORTHO05D001022 3.3e-08 62.0 74 51.4
Manes.01G206000 Manihot esculenta HOM05D000690 ORTHO05D001022 3.3e-08 62.0 105 39.0
FAN24G1198 Fragaria x ananassa HOM05D000690 ORTHO05D001022 4.3e-08 61.6 108 44.4
vmacro15352 Vaccinium macrocarpon HOM05D000690 ORTHO05D001022 4.3e-08 61.6 119 39.5
Manes.03G176900 Manihot esculenta HOM05D000690 ORTHO05D001022 5.6e-08 61.2 101 43.6
Phvul.007G058400 Phaseolus vulgaris HOM05D000690 ORTHO05D001022 7.3e-08 60.8 72 48.6
Cpa.g.sc487.5 Carica papaya HOM05D000690 ORTHO05D001022 9.6e-08 60.5 103 43.7
Prupe.1G016000 Prunus persica HOM05D000690 ORTHO05D001022 9.6e-08 60.5 91 40.7
PSO210G6390 Papaver somniferum HOM05D000690 ORTHO05D001022 2.1e-07 59.3 99 42.4
Potri.002G050800 Populus trichocarpa HOM05D000690 ORTHO05D001022 2.1e-07 59.3 106 39.6
Nitab4.5_0000853g0020 Nicotiana tabacum HOM05D000690 ORTHO05D001022 2.8e-07 58.9 92 38.0
Nitab4.5_0002070g0020 Nicotiana tabacum HOM05D000690 ORTHO05D001022 4.8e-07 58.2 101 36.6
Potri.005G211500 Populus trichocarpa HOM05D000690 ORTHO05D001022 1.1e-06 57.0 105 35.2
Glyma.11G006400 Glycine max HOM05D000690 ORTHO05D001022 1.4e-06 56.6 88 42.0
PGSC0003DMG400032251 Solanum tuberosum HOM05D000690 ORTHO05D001022 1.4e-06 56.6 87 42.5
SGA_v2.0_scaffold1G00499 Striga asiatica HOM05D000690 ORTHO05D001022 1.4e-06 56.6 109 42.2
COL.COLO4_09065 Corchorus olitorius HOM05D000690 ORTHO05D001022 1.8e-06 56.2 111 43.2
Gorai.012G060900 Gossypium raimondii HOM05D000690 ORTHO05D022135 1.8e-06 56.2 74 48.6
Sabra10G0057900 Salix brachista HOM05D000690 ORTHO05D001022 1.8e-06 56.2 102 37.3
RcHm_v2.0_Chr4g0415801 Rosa chinensis HOM05D000690 ORTHO05D001022 3.1e-06 55.5 91 39.6
FAN07G2425 Fragaria x ananassa HOM05D000690 ORTHO05D001022 4.0e-06 55.1 91 40.7
FAN22G1409 Fragaria x ananassa HOM05D000690 ORTHO05D001022 6.9e-06 54.3 91 40.7
Solyc09g082210.4 Solanum lycopersicum HOM05D000690 ORTHO05D001022 6.9e-06 54.3 87 41.4
MBI05_g05245_MAGBIO Magnolia biondii HOM05D000690 ORTHO05D001022 9.0e-06 53.9 85 43.5
Sabra08G0117900 Salix brachista HOM05D000690 ORTHO05D001022 9.0e-06 53.9 102 38.2


User provided reference genes

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