Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007182 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 1.9e-33 145.2 71 100.0
CSS0007754 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 3.0e-26 121.3 64 92.2
CSS0006904 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 1.1e-25 119.4 64 90.6
CSS0025404 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 1.6e-24 115.5 64 87.5
Eucgr.F01146 Eucalyptus grandis HOM05D002373 ORTHO05D008661 2.3e-23 111.7 75 74.7
Dinv20179 Davidia involucrata HOM05D002373 ORTHO05D008661 4.0e-23 110.9 75 70.7
Nn1g04122 Nelumbo nucifera HOM05D002373 ORTHO05D008661 1.5e-22 109.0 64 79.7
Medtr2g085340 Medicago truncatula HOM05D002373 ORTHO05D008661 2.6e-22 108.2 64 73.4
TWI38G1988 Tripterygium wilfordii HOM05D002373 ORTHO05D008661 4.4e-22 107.5 64 75.0
Ca_03504_v3 Cicer arietinum L. HOM05D002373 ORTHO05D008661 7.5e-22 106.7 64 71.9
FvH4_3g19840 Fragaria vesca HOM05D002373 ORTHO05D008661 9.8e-22 106.3 64 73.4
Psat5g243920 Pisum sativum HOM05D002373 ORTHO05D008661 9.8e-22 106.3 64 71.9
MD11G1252400 Malus domestica HOM05D002373 ORTHO05D008661 1.3e-21 105.9 64 75.0
Carub.0001s4228 Capsella rubella HOM05D002373 ORTHO05D008661 1.7e-21 105.5 64 75.0
Cpa.g.sc80.70 Carica papaya HOM05D002373 ORTHO05D008661 1.7e-21 105.5 64 76.6
ClCG05G009320 Citrullus lanatus HOM05D002373 ORTHO05D008661 1.7e-21 105.5 75 68.0
THA.LOC104810464 Tarenaya hassleriana HOM05D002373 ORTHO05D008661 1.7e-21 105.5 64 78.1
Actinidia35249 Actinidia chinensis HOM05D002373 ORTHO05D008661 2.2e-21 105.1 64 78.1
TAR624G1149 Trochodendron aralioides HOM05D002373 ORTHO05D008661 2.2e-21 105.1 75 68.0
Atru.BG.152.p Acer truncatum HOM05D002373 ORTHO05D008661 2.9e-21 104.8 64 73.4
Atru.BG.257.p Acer truncatum HOM05D002373 ORTHO05D008661 2.9e-21 104.8 64 73.4
RcHm_v2.0_Chr5g0033281 Rosa chinensis HOM05D002373 ORTHO05D008661 2.9e-21 104.8 64 71.9
TPR.G39017 Trifolium pratense HOM05D002373 ORTHO05D008661 2.9e-21 104.8 64 71.9
Lj3g0019501 Lotus japonicus HOM05D002373 ORTHO05D008661 3.7e-21 104.4 64 71.9
AL1G61480 Arabidopsis lyrata HOM05D002373 ORTHO05D008661 4.9e-21 104.0 64 75.0
Lalb_Chr25g0286331 Lupinus albus HOM05D002373 ORTHO05D008661 4.9e-21 104.0 75 62.7
Thecc.07G090300 Theobroma cacao HOM05D002373 ORTHO05D008661 4.9e-21 104.0 64 75.0
AT1G53120 Arabidopsis thaliana HOM05D002373 ORTHO05D008661 6.4e-21 103.6 64 75.0
CiPaw.11G170200 Carya illinoinensis HOM05D002373 ORTHO05D008661 6.4e-21 103.6 64 73.4
MELO3C019408.2 Cucumis melo HOM05D002373 ORTHO05D008661 6.4e-21 103.6 75 66.7
DCAR_019560 Daucus carota HOM05D002373 ORTHO05D008661 6.4e-21 103.6 75 62.7
Aa31LG10G2010 Aethionema arabicum HOM05D002373 ORTHO05D008661 8.3e-21 103.2 64 75.0
Cfa020577 Carpinus fangiana HOM05D002373 ORTHO05D008661 8.3e-21 103.2 64 73.4
CsaV3_3G019460 Cucumis sativus L. HOM05D002373 ORTHO05D008661 8.3e-21 103.2 75 66.7
Sed0026190 Sechium edule HOM05D002373 ORTHO05D008661 8.3e-21 103.2 75 65.3
vmacro09529 Vaccinium macrocarpon HOM05D002373 ORTHO05D008661 8.3e-21 103.2 66 72.7
CARHR043340 Cardamine hirsuta HOM05D002373 ORTHO05D008661 1.1e-20 102.8 64 75.0
FAN11G3740 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.1e-20 102.8 64 70.3
FAN21G4050 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.1e-20 102.8 64 70.3
FAN25G2634 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.1e-20 102.8 64 70.3
MBI06_g23077_MAGBIO Magnolia biondii HOM05D002373 ORTHO05D008661 1.1e-20 102.8 63 74.6
Thhalv10011660m.g Eutrema salsugineum HOM05D002373 ORTHO05D008661 1.4e-20 102.4 64 73.4
Haze_09434 Corylus avellana HOM05D002373 ORTHO05D008661 1.9e-20 102.1 64 73.4
Ciclev10008924m.g Citrus clementina HOM05D002373 ORTHO05D008661 2.4e-20 101.7 75 64.0
Sc03g0010080 Simmondsia chinensis HOM05D002373 ORTHO05D008661 2.4e-20 101.7 63 76.2
PGSC0003DMG400015321 Solanum tuberosum HOM05D002373 ORTHO05D008661 2.4e-20 101.7 74 64.9
GSVIVG01014327001 Vitis vinifera HOM05D002373 ORTHO05D008661 2.4e-20 101.7 64 75.0
Aqoxy1G02390 Aquilegia oxysepala HOM05D002373 ORTHO05D008661 3.2e-20 101.3 64 71.9
FAN16G2188 Fragaria x ananassa HOM05D002373 ORTHO05D008661 3.2e-20 101.3 64 68.8
HanXRQChr12g0364201 Helianthus annuus HOM05D002373 ORTHO05D008661 3.2e-20 101.3 64 71.9
Nitab4.5_0009292g0020 Nicotiana tabacum HOM05D002373 ORTHO05D008661 3.2e-20 101.3 75 64.0
PSO541G6350 Papaver somniferum HOM05D002373 ORTHO05D008661 3.2e-20 101.3 64 70.3
QL08p022081 Quercus lobata HOM05D002373 ORTHO05D008661 3.2e-20 101.3 64 71.9
Solyc12g013870.3 Solanum lycopersicum HOM05D002373 ORTHO05D008661 3.2e-20 101.3 74 64.9
Sopen12g007190 Solanum pennellii HOM05D002373 ORTHO05D008661 3.2e-20 101.3 74 64.9
Gohir.A13G146100 Gossypium hirsutum HOM05D002373 ORTHO05D008661 4.1e-20 100.9 64 73.4
Gohir.D13G151000 Gossypium hirsutum HOM05D002373 ORTHO05D008661 4.1e-20 100.9 64 73.4
arahy.Tifrunner.gnm1.ann1.CVL1T8 Arachis hypogaea HOM05D002373 ORTHO05D008661 5.4e-20 100.5 64 67.2
arahy.Tifrunner.gnm1.ann1.D1WMTZ Arachis hypogaea HOM05D002373 ORTHO05D008661 5.4e-20 100.5 64 67.2
CSS0005109 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 5.4e-20 100.5 65 81.5
Glyma.12G224900 Glycine max HOM05D002373 ORTHO05D008661 5.4e-20 100.5 64 68.8
Peaxi162Scf00000g03511 Petunia axillaris HOM05D002373 ORTHO05D008661 5.4e-20 100.5 74 63.5
Sabra11G0104200 Salix brachista HOM05D002373 ORTHO05D008661 5.4e-20 100.5 64 71.9
Sp1g39670 Schrenkiella parvula HOM05D002373 ORTHO05D008661 5.4e-20 100.5 64 73.4
COL.COLO4_27178 Corchorus olitorius HOM05D002373 ORTHO05D008661 7.0e-20 100.1 64 71.9
Ah.06g184370 Amaranthus hybridus HOM05D002373 ORTHO05D008661 9.2e-20 99.8 63 73.0
ATR0737G132 Amborella trichopoda HOM05D002373 ORTHO05D008661 9.2e-20 99.8 64 68.8
A05p18620 Brassica napus HOM05D002373 ORTHO05D008661 9.2e-20 99.8 64 73.4
BraA05t20753Z Brassica rapa HOM05D002373 ORTHO05D008661 9.2e-20 99.8 64 73.4
ECA240G3063 Erigeron canadensis HOM05D002373 ORTHO05D008661 9.2e-20 99.8 64 68.8
Gorai.013G169000 Gossypium raimondii HOM05D002373 ORTHO05D008661 9.2e-20 99.8 64 71.9
Gorai.013G170800 Gossypium raimondii HOM05D002373 ORTHO05D008661 9.2e-20 99.8 64 71.9
MSTRG.12905 Avicennia marina HOM05D002373 ORTHO05D008661 1.2e-19 99.4 64 68.8
BcaC08g44045 Brassica carinata HOM05D002373 ORTHO05D008661 1.2e-19 99.4 64 73.4
C06p14460 Brassica napus HOM05D002373 ORTHO05D008661 1.2e-19 99.4 64 73.4
BolC6t36626H Brassica oleracea HOM05D002373 ORTHO05D008661 1.2e-19 99.4 64 73.4
Os01g0747700 Oryza sativa ssp. japonica HOM05D002373 ORTHO05D008661 1.2e-19 99.4 64 68.8
EL10Ac4g08187 Beta vulgaris HOM05D002373 ORTHO05D008661 1.6e-19 99.0 63 73.0
BcaB02g10929 Brassica carinata HOM05D002373 ORTHO05D005805 1.6e-19 99.0 64 73.4
CANSAT56G3654 Cannabis sativa HOM05D002373 ORTHO05D008661 1.6e-19 99.0 64 71.9
CAN.G213.9 Capsicum annuum HOM05D002373 ORTHO05D008661 1.6e-19 99.0 74 62.2
Prupe.4G180500 Prunus persica HOM05D002373 ORTHO05D008661 1.6e-19 99.0 64 65.6
SGA_v2.0_scaffold70G23676 Striga asiatica HOM05D002373 ORTHO05D008661 1.6e-19 99.0 65 67.7
Lsat_1_v5_gn_9_97941 Lactuca sativa HOM05D002373 ORTHO05D008661 2.7e-19 98.2 64 68.8
Phvul.002G286700 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 2.7e-19 98.2 64 67.2
VMungo1080G1315 Vigna mungo HOM05D002373 ORTHO05D008661 2.7e-19 98.2 64 67.2
Manes.03G109500 Manihot esculenta HOM05D002373 ORTHO05D008661 6.0e-19 97.1 75 62.7
Lj1C842T3 Lonicera japonica HOM05D002373 ORTHO05D008661 7.8e-19 96.7 64 67.2
Phvul.005G072600 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 1.0e-18 96.3 64 67.2
unitig_26.g9527 Utricularia gibba HOM05D002373 ORTHO05D008661 1.3e-18 95.9 64 65.6
Zm00001eb153060 Zea mays HOM05D002373 ORTHO05D008661 2.3e-18 95.1 64 67.2
CDE02G2303 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 3.0e-18 94.7 63 68.3
Oeu060559.2 Olea europaea HOM05D002373 ORTHO05D008661 3.0e-18 94.7 64 65.6
AUR62019433 Chenopodium quinoa HOM05D002373 ORTHO05D008661 3.9e-18 94.4 66 71.2
CDE08G0691 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 5.1e-18 94.0 60 70.0
AUR62039201 Chenopodium quinoa HOM05D002373 ORTHO05D008661 8.6e-18 93.2 66 69.7
HPP92_024439 Vanilla planifolia HOM05D002373 ORTHO05D008661 8.6e-18 93.2 64 62.5
PGR083G2563 Punica granatum HOM05D002373 ORTHO05D008661 1.1e-17 92.8 63 71.4
Migut.H01944 Erythranthe guttata HOM05D002373 ORTHO05D008661 3.3e-17 91.3 65 66.2
Hund20000 Selenicereus undatus HOM05D002373 ORTHO05D008661 3.3e-17 91.3 66 69.7
Potri.011G119800 Populus trichocarpa HOM05D002373 ORTHO05D008661 5.6e-17 90.5 64 67.2
Pp3c20_21790 Physcomitrium patens HOM05D002373 ORTHO05D008661 1.4e-15 85.9 61 59.0
Mapoly0051s0038 Marchantia polymorpha HOM05D002373 ORTHO05D008661 4.0e-15 84.3 61 60.7
AagrBONN_evm.TU.Sc2ySwM_344.3401 Anthoceros agrestis HOM05D002373 ORTHO05D008661 1.5e-14 82.4 61 59.0
Glyma.13G276400 Glycine max HOM05D002373 ORTHO05D008661 8.3e-13 76.6 65 52.3
Nitab4.5_0000332g0080 Nicotiana tabacum HOM05D002373 ORTHO05D008661 1.9e-12 75.5 64 59.4
Cre12.g502950 Chlamydomonas reinhardtii HOM05D002373 ORTHO05D008661 4.1e-12 74.3 61 52.5
SMO367G1013 Selaginella moellendorffii HOM05D002373 ORTHO05D008661 3.5e-11 71.2 69 47.8
MCO14G219 Micromonas commoda HOM05D002373 ORTHO05D008661 5.1e-10 67.4 61 47.5
Thecc.07G090900 Theobroma cacao HOM05D002373 ORTHO05D008661 1.1e-09 66.2 41 75.6
Rhsim04G0021500 Rhododendron simsii HOM05D002373 ORTHO05D008661 4.4e-06 54.3 35 77.1


User provided reference genes

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