Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007178 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 7.9e-189 663.7 351 100.0
CSS0037204 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 8.0e-141 504.2 331 81.3
CSS0010902 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.8e-133 479.2 333 81.7
CSS0047616 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.0e-128 463.0 327 81.3
CSS0017527 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.7e-82 310.5 337 61.7
CSS0040020 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 4.1e-68 262.7 296 54.1
CSS0041515 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 5.9e-67 258.8 292 54.5
CSS0001367 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 4.1e-60 236.1 295 49.5
CSS0007087 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 7.4e-46 188.7 170 64.7
CSS0015616 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 7.2e-41 172.2 165 62.4
CSS0019759 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.1e-40 170.6 182 58.2
Rhsim12G0092900 Rhododendron simsii HOM05D009300 ORTHO05D010234 2.8e-37 160.2 214 43.9
vmacro12139 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 5.7e-30 136.0 229 35.8
RhsimUnG0101600 Rhododendron simsii HOM05D009300 ORTHO05D010234 3.7e-29 133.3 253 33.6
vmacro12141 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 3.7e-29 133.3 287 33.1
vmacro00531 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 3.1e-28 130.2 238 34.0
vmacro14328 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 7.7e-27 125.6 243 33.3
Rhsim01G0128900 Rhododendron simsii HOM05D009300 ORTHO05D010234 8.0e-24 115.5 214 31.3
vmacro13356 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.1e-20 105.1 216 32.9
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 3.9e-18 96.7 226 26.5
Rhsim02G0138000 Rhododendron simsii HOM05D009300 ORTHO05D010234 8.6e-18 95.5 112 44.6
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 8.6e-18 95.5 226 26.5
Rhsim06G0220100 Rhododendron simsii HOM05D008549 ORTHO05D010234 4.3e-17 93.2 238 30.7
Rhsim10G0213800 Rhododendron simsii HOM05D008549 ORTHO05D010234 1.6e-16 91.3 254 30.3
Rhsim04G0140300 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.6e-16 90.1 209 32.1
Rhsim03G0038000 Rhododendron simsii HOM05D009565 ORTHO05D012252 8.0e-16 89.0 233 28.3
vmacro14701 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 8.0e-16 89.0 164 34.1
vmacro14771 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 8.0e-16 89.0 164 34.1
Rhsim06G0127000 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.8e-15 87.8 274 26.3
Rhsim10G0126600 Rhododendron simsii HOM05D009565 ORTHO05D012252 2.3e-15 87.4 275 26.9
vmacro13454 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 6.8e-15 85.9 186 33.3
RhsimUnG0074200 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.9e-15 85.5 287 27.9
Rhsim10G0179100 Rhododendron simsii HOM05D009300 ORTHO05D010234 2.6e-14 84.0 118 44.1
Hma1.2p1_0613F.1_g189140 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 5.8e-14 82.8 208 29.3
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.8e-14 82.8 213 30.5
Rhsim01G0063300 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.7e-13 81.3 195 27.2
Rhsim11G0014100 Rhododendron simsii HOM05D009300 ORTHO05D010234 2.9e-13 80.5 106 41.5
Dinv11320 Davidia involucrata HOM05D000791 ORTHO05D000669 4.9e-13 79.7 186 29.0
Hma1.2p1_0101F.1_g049380 Hydrangea macrophylla HOM05D005507 ORTHO05D009882 1.1e-12 78.6 175 30.9
PGR004G1992 Punica granatum HOM05D000791 ORTHO05D000669 2.4e-12 77.4 186 28.5
Rhsim12G0114600 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.2e-11 75.1 229 27.5
QL05p078054 Quercus lobata HOM05D007798 ORTHO05D009882 2.7e-11 73.9 220 25.0
Rhsim11G0024200 Rhododendron simsii HOM05D009565 ORTHO05D012252 3.5e-11 73.6 239 25.9
Migut.F01288 Erythranthe guttata HOM05D000791 ORTHO05D000669 4.6e-11 73.2 212 27.8
Actinidia04231 Actinidia chinensis HOM05D007798 ORTHO05D009882 7.8e-11 72.4 166 30.1
Dinv13764 Davidia involucrata HOM05D011313 ORTHO05D013316 2.3e-10 70.9 153 28.1
Rhsim09G0060200 Rhododendron simsii HOM05D008549 ORTHO05D010234 8.6e-10 68.9 240 27.9
Rhsim09G0079100 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.1e-09 68.6 191 28.3
MBI11_g21812_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.5e-09 68.2 191 27.2
Actinidia03841 Actinidia chinensis HOM05D007798 ORTHO05D009882 1.9e-09 67.8 255 27.8
CSS0036223 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.9e-09 67.8 61 54.1
Migut.N00810 Erythranthe guttata HOM05D000791 ORTHO05D000669 1.9e-09 67.8 260 24.6
QL05p075545 Quercus lobata HOM05D007798 ORTHO05D009882 1.9e-09 67.8 211 25.1
RhsimUnG0068400 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.5e-09 67.4 73 43.8
CSS0005216 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 9.5e-09 65.5 150 33.3
CSS0029580 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 9.5e-09 65.5 150 33.3
CSS0037861 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 9.5e-09 65.5 150 33.3
CSS0039359 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 9.5e-09 65.5 150 33.3
MELO3C028240.2 Cucumis melo HOM05D001963 ORTHO05D001863 9.5e-09 65.5 178 26.4
MELO3C034455.2 Cucumis melo HOM05D001963 ORTHO05D001863 9.5e-09 65.5 178 26.4
Rhsim01G0076100 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.2e-08 65.1 236 26.7
CSS0034635 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D003213 1.6e-08 64.7 150 32.7
FAN18G0028 Fragaria x ananassa HOM05D009879 ORTHO05D009647 1.6e-08 64.7 160 28.1
CSS0023015 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 3.6e-08 63.5 127 37.0
CSS0011165 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 6.2e-08 62.8 66 51.5
CSS0019851 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 6.2e-08 62.8 66 51.5
CSS0020531 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 6.2e-08 62.8 147 33.3
CSS0027932 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 6.2e-08 62.8 83 39.8
MELO3C034470.2 Cucumis melo HOM05D001963 ORTHO05D001863 6.2e-08 62.8 179 26.3
vmacro01281 Vaccinium macrocarpon HOM05D017301 ORTHO05D000669 6.2e-08 62.8 172 27.9
Sed0000006 Sechium edule HOM05D000791 ORTHO05D001863 8.1e-08 62.4 146 30.8
FvH4_6g23072 Fragaria vesca HOM05D009879 ORTHO05D009647 1.1e-07 62.0 160 27.5
RcHm_v2.0_Chr4g0410891 Rosa chinensis HOM05D008705 ORTHO05D000669 1.4e-07 61.6 195 25.1
TWI73G1228 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 1.4e-07 61.6 197 27.9
TWI18G1095 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 1.8e-07 61.2 197 27.4
FAN20G1055 Fragaria x ananassa HOM05D008705 ORTHO05D001863 2.3e-07 60.8 174 27.0
Rhsim07G0185300 Rhododendron simsii HOM05D000107 ORTHO05D003213 2.3e-07 60.8 91 41.8
MELO3C029233.2 Cucumis melo HOM05D001963 ORTHO05D001863 3.1e-07 60.5 178 25.3
FAN07G2263 Fragaria x ananassa HOM05D011706 ORTHO05D009647 3.1e-07 60.5 225 22.7
Actinidia33688 Actinidia chinensis HOM05D007798 ORTHO05D009882 4.0e-07 60.1 207 25.6
MELO3C030180.2 Cucumis melo HOM05D001963 ORTHO05D001863 5.2e-07 59.7 179 25.7
Peaxi162Scf00524g00083 Petunia axillaris HOM05D003120 ORTHO05D003568 8.9e-07 58.9 206 26.7
RcHm_v2.0_Chr1g0381191 Rosa chinensis HOM05D008705 ORTHO05D000669 8.9e-07 58.9 183 26.2
CSS0048637 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 1.2e-06 58.5 83 32.5
RcHm_v2.0_Chr3g0486961 Rosa chinensis HOM05D008705 ORTHO05D000669 1.2e-06 58.5 195 25.1
CSS0027658 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.5e-06 58.2 55 58.2
TWI59G0531 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 1.5e-06 58.2 203 26.1
RcHm_v2.0_Chr4g0385011 Rosa chinensis HOM05D008705 ORTHO05D000669 2.0e-06 57.8 259 22.8
FAN10G2090 Fragaria x ananassa HOM05D008705 ORTHO05D000669 2.6e-06 57.4 259 23.2
FAN10G3855 Fragaria x ananassa HOM05D008705 ORTHO05D000669 4.4e-06 56.6 259 23.2
RcHm_v2.0_Chr7g0214031 Rosa chinensis HOM05D008705 ORTHO05D000669 4.4e-06 56.6 183 25.7
CSS0045362 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 5.8e-06 56.2 51 52.9
Rhsim06G0049000 Rhododendron simsii HOM05D009300 ORTHO05D010234 5.8e-06 56.2 90 38.9
CSS0007628 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 7.5e-06 55.8 147 32.0
CSS0008322 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 7.5e-06 55.8 71 42.3
CSS0019606 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 7.5e-06 55.8 82 30.5
MELO3C029715.2 Cucumis melo HOM05D001963 ORTHO05D001863 9.8e-06 55.5 183 25.7
Peaxi162Scf00091g00169 Petunia axillaris HOM05D003120 ORTHO05D003568 9.8e-06 55.5 217 24.9


User provided reference genes

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