Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007177 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.4e-80 303.1 184 100.0
CSS0002487 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.1e-78 294.7 184 95.1
CSS0012893 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.1e-78 294.7 184 95.1
CSS0020953 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.1e-78 294.7 184 95.1
CSS0042621 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.3e-77 291.6 186 94.6
CSS0048721 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.8e-76 288.9 184 95.7
CSS0032614 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.1e-72 275.0 184 89.1
CSS0038071 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.0e-50 203.0 185 72.4
CSS0030618 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.7e-31 139.4 66 98.5
CSS0040728 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.1e-30 135.2 66 93.9
CSS0007280 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.1e-29 134.0 66 93.9
CSS0035704 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.6e-28 130.2 66 90.9
CSS0042015 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 8.2e-28 127.9 120 54.2
CSS0005185 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.8e-27 126.7 120 54.2
CSS0040160 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.8e-27 126.7 120 54.2
CSS0046119 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.4e-27 126.3 122 53.3
CSS0016088 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.1e-27 125.9 122 53.3
CSS0004182 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.3e-27 125.2 122 53.3
CSS0008214 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.3e-27 125.2 122 53.3
CSS0010423 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.3e-27 125.2 122 53.3
CSS0001231 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.9e-27 124.8 127 52.0
CSS0003542 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.9e-27 124.8 127 52.0
CSS0027060 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.9e-27 124.8 127 52.0
CSS0045334 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 9.0e-27 124.4 127 51.2
CSS0037011 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.2e-26 124.0 127 51.2
CSS0018539 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.5e-26 123.6 120 52.5
CSS0000891 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.0e-26 123.2 127 51.2
CSS0028601 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.0e-26 123.2 127 51.2
CSS0033025 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.0e-26 123.2 127 51.2
CSS0033950 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.0e-26 123.2 127 51.2
CSS0041327 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.0e-26 123.2 127 51.2
CSS0041437 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.0e-26 123.2 127 51.2
CSS0001339 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.6e-26 122.9 122 51.6
CSS0007522 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.6e-26 122.9 122 51.6
CSS0044969 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.6e-26 122.9 122 51.6
CSS0013618 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.7e-26 121.3 120 51.7
Rhsim01G0158900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-21 107.5 136 42.6
Rhsim01G0079300 Rhododendron simsii HOM05D005012 ORTHO05D005886 1.3e-20 104.0 136 41.2
Rhsim01G0079900 Rhododendron simsii HOM05D005012 ORTHO05D005886 6.3e-20 101.7 136 41.2
Rhsim09G0006300 Rhododendron simsii HOM05D005012 ORTHO05D005886 4.5e-18 95.5 126 42.1
Rhsim07G0133200 Rhododendron simsii HOM05D005012 ORTHO05D005886 6.5e-17 91.7 126 42.1
TWI79G1319 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 6.5e-17 91.7 125 39.2
FAN11G2763 Fragaria x ananassa HOM05D005012 ORTHO05D008319 1.1e-16 90.9 132 39.4
FvH4_6g37930 Fragaria vesca HOM05D005012 ORTHO05D005886 1.9e-16 90.1 126 41.3
FAN10G0147 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.2e-16 89.4 129 38.8
FAN26G2139 Fragaria x ananassa HOM05D005012 ORTHO05D005886 3.2e-16 89.4 129 38.8
FAN13G1160 Fragaria x ananassa HOM05D005012 ORTHO05D005886 4.2e-16 89.0 129 38.8
FAN17G1574 Fragaria x ananassa HOM05D005012 ORTHO05D005886 5.5e-16 88.6 128 39.8
FAN20G1519 Fragaria x ananassa HOM05D005012 ORTHO05D005886 5.5e-16 88.6 129 38.0
FvH4_3g22860 Fragaria vesca HOM05D005012 ORTHO05D005886 7.2e-16 88.2 132 38.6
FAN16G2537 Fragaria x ananassa HOM05D005012 ORTHO05D005886 7.2e-16 88.2 129 38.8
FvH4_1g29802 Fragaria vesca HOM05D005012 ORTHO05D005886 9.4e-16 87.8 129 38.0
FAN04G2305 Fragaria x ananassa HOM05D005012 ORTHO05D005886 3.6e-15 85.9 129 37.2
RcHm_v2.0_Chr6g0273901 Rosa chinensis HOM05D005012 ORTHO05D005886 3.6e-15 85.9 127 37.0
CSS0009064 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.8e-14 83.6 103 46.6
FAN15G1928 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.3e-14 83.2 129 36.4
FAN04G2098 Fragaria x ananassa HOM05D005012 ORTHO05D005886 3.0e-14 82.8 128 35.9
FAN04G2537 Fragaria x ananassa HOM05D005012 ORTHO05D005886 3.0e-14 82.8 128 35.9
FAN04G2636 Fragaria x ananassa HOM05D005012 ORTHO05D005886 3.0e-14 82.8 128 35.9
FAN15G1881 Fragaria x ananassa HOM05D005012 ORTHO05D005886 3.0e-14 82.8 128 35.9
FAN25G0106 Fragaria x ananassa HOM05D005012 ORTHO05D005886 3.0e-14 82.8 128 35.9
TWI77G0909 Tripterygium wilfordii HOM05D005012 ORTHO05D005886 3.0e-14 82.8 105 41.9
FAN07G2178 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.1e-13 80.9 125 36.8
FAN19G1173 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.1e-13 80.9 129 36.4
CSS0034991 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.7e-12 77.0 109 40.4
Rhsim05G0112900 Rhododendron simsii HOM05D005012 ORTHO05D005886 2.8e-12 76.3 109 40.4
RcHm_v2.0_Chr7g0222641 Rosa chinensis HOM05D005012 ORTHO05D005886 4.8e-12 75.5 133 31.6
vmacro22380 Vaccinium macrocarpon HOM05D005012 ORTHO05D005886 8.2e-12 74.7 104 44.2
CSS0011556 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.1e-11 72.8 79 49.4
FAN04G0818 Fragaria x ananassa HOM05D005012 ORTHO05D005886 5.3e-11 72.0 123 33.3
vmacro03774 Vaccinium macrocarpon HOM05D005012 ORTHO05D005886 3.5e-10 69.3 107 37.4
CSS0012868 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.9e-09 66.2 54 55.6
FvH4_1g28181 Fragaria vesca HOM05D005012 ORTHO05D005886 2.9e-09 66.2 118 33.9
CSS0022677 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.8e-09 65.9 54 53.7
FvH4_1g28940 Fragaria vesca HOM05D005012 ORTHO05D005886 5.0e-09 65.5 118 33.9
CSS0019574 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.5e-08 63.2 54 53.7
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 2.5e-08 63.2 127 30.7
CSS0038015 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.2e-08 62.8 50 56.0
FAN22G1849 Fragaria x ananassa HOM05D005012 ORTHO05D005886 3.2e-08 62.8 126 31.0
FAN26G2799 Fragaria x ananassa HOM05D005012 ORTHO05D005886 4.2e-08 62.4 107 36.4
FAN16G2301 Fragaria x ananassa HOM05D005012 ORTHO05D005886 5.5e-08 62.0 107 32.7
Dinv09828 Davidia involucrata HOM05D001309 ORTHO05D000385 7.2e-08 61.6 128 30.5
Rhsim09G0115800 Rhododendron simsii HOM05D005012 ORTHO05D005886 7.2e-08 61.6 44 63.6
CSS0022576 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 8.0e-07 58.2 51 54.9
CSS0049721 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.0e-06 57.8 45 57.8
Rhsim01G0081500 Rhododendron simsii HOM05D005012 ORTHO05D005886 1.0e-06 57.8 57 47.4
RcHm_v2.0_Chr3g0475981 Rosa chinensis HOM05D005012 ORTHO05D005886 1.0e-06 57.8 45 48.9
Rhsim07G0081300 Rhododendron simsii HOM05D000074 ORTHO05D002343 2.3e-06 56.6 58 48.3
Atru.chr6.1842 Acer truncatum HOM05D005012 ORTHO05D005886 3.0e-06 56.2 132 26.5
CSS0013518 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.0e-06 56.2 50 54.0
FAN08G1587 Fragaria x ananassa HOM05D005012 ORTHO05D005886 4.0e-06 55.8 96 34.4
FAN26G1690 Fragaria x ananassa HOM05D005012 ORTHO05D005886 6.7e-06 55.1 53 47.2
TAR626G0226 Trochodendron aralioides HOM05D009698 ORTHO05D000385 6.7e-06 55.1 99 35.4


User provided reference genes

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