Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007145 Camellia sinensis var. sinensis HOM05D000359 ORTHO05D028371 1.3e-118 429.9 237 100.0
CSS0025934 Camellia sinensis var. sinensis HOM05D000359 ORTHO05D000251 1.3e-89 333.6 195 90.8
Dinv03945 Davidia involucrata HOM05D000359 ORTHO05D000251 1.0e-54 217.6 204 60.8
Actinidia09954 Actinidia chinensis HOM05D000359 ORTHO05D000251 2.8e-52 209.5 204 60.3
Dinv22316 Davidia involucrata HOM05D000359 ORTHO05D000251 1.3e-41 174.1 191 54.5
Lj8C165G16 Lonicera japonica HOM05D000359 ORTHO05D000251 3.4e-34 149.4 214 44.4
vmacro11773 Vaccinium macrocarpon HOM05D000359 ORTHO05D000251 5.8e-34 148.7 203 49.3
Hma1.2p1_1054F.1_g252480 Hydrangea macrophylla HOM05D000359 ORTHO05D000251 1.0e-30 137.9 187 46.5
Oeu062623.1 Olea europaea HOM05D000359 ORTHO05D000251 1.0e-30 137.9 208 43.8
Haze_09590 Corylus avellana HOM05D000359 ORTHO05D000251 2.3e-30 136.7 219 44.3
TAR629G0800 Trochodendron aralioides HOM05D000359 ORTHO05D000251 8.9e-27 124.8 184 43.5
MD11G1228300 Malus domestica HOM05D000359 ORTHO05D000251 3.4e-26 122.9 207 42.0
TAR624G0422 Trochodendron aralioides HOM05D000359 ORTHO05D000251 3.4e-26 122.9 218 39.9
TAR627G0843 Trochodendron aralioides HOM05D000359 ORTHO05D000251 8.3e-25 118.2 206 38.3
Cc05_g13140 Coffea canephora HOM05D000359 ORTHO05D000251 4.1e-24 115.9 204 39.2
Prupe.4G201000 Prunus persica HOM05D000359 ORTHO05D000251 2.1e-23 113.6 190 42.6
FvH4_3g21670 Fragaria vesca HOM05D000359 ORTHO05D000251 6.0e-23 112.1 198 38.4
Peaxi162Scf00257g00111 Petunia axillaris HOM05D000359 ORTHO05D000251 1.0e-22 111.3 204 39.2
FAN25G0314 Fragaria x ananassa HOM05D000359 ORTHO05D000251 1.3e-22 110.9 205 39.0
CiPaw.11G182700 Carya illinoinensis HOM05D000359 ORTHO05D000251 5.1e-22 109.0 209 42.1
FAN21G2111 Fragaria x ananassa HOM05D000359 ORTHO05D000251 3.3e-21 106.3 210 39.0
FAN11G3509 Fragaria x ananassa HOM05D000359 ORTHO05D000251 5.6e-21 105.5 198 36.9
FAN16G2098 Fragaria x ananassa HOM05D000359 ORTHO05D000251 1.2e-20 104.4 208 38.5
MD03G1213400 Malus domestica HOM05D000359 ORTHO05D000251 1.2e-20 104.4 204 39.2
RcHm_v2.0_Chr5g0037151 Rosa chinensis HOM05D000359 ORTHO05D000251 2.8e-20 103.2 161 41.6
QL08p013840 Quercus lobata HOM05D000359 ORTHO05D000251 8.1e-20 101.7 113 48.7
Oeu013861.1 Olea europaea HOM05D000359 ORTHO05D000251 1.4e-19 100.9 153 39.9
Cfa020438 Carpinus fangiana HOM05D000359 ORTHO05D000251 6.8e-19 98.6 207 39.1
Gohir.D08G030700 Gossypium hirsutum HOM05D000359 ORTHO05D000251 1.7e-17 94.0 132 42.4
Gorai.004G028300 Gossypium raimondii HOM05D000359 ORTHO05D000251 1.7e-17 94.0 132 42.4
TWI39G0270 Tripterygium wilfordii HOM05D000359 ORTHO05D000251 1.7e-17 94.0 209 36.4
Nitab4.5_0002238g0040 Nicotiana tabacum HOM05D000359 ORTHO05D000251 4.9e-17 92.4 109 46.8
Sopen07g032150 Solanum pennellii HOM05D000359 ORTHO05D000251 4.9e-17 92.4 163 39.3
Haze_12943 Corylus avellana HOM05D000359 ORTHO05D000251 6.4e-17 92.0 139 40.3
Gohir.A08G020008 Gossypium hirsutum HOM05D000359 ORTHO05D000251 8.4e-17 91.7 132 42.4
Duzib213G1041 Durio zibethinus HOM05D000359 ORTHO05D000251 1.1e-16 91.3 125 42.4
Cfa014453 Carpinus fangiana HOM05D000359 ORTHO05D000251 1.4e-16 90.9 137 40.1
Thecc.07G055400 Theobroma cacao HOM05D000359 ORTHO05D000251 2.4e-16 90.1 116 41.4
MSTRG.15169 Avicennia marina HOM05D000359 ORTHO05D000251 3.2e-16 89.7 218 32.6
TWI38G0242 Tripterygium wilfordii HOM05D000359 ORTHO05D000251 5.4e-16 89.0 196 38.3
Nn1g06946 Nelumbo nucifera HOM05D000359 ORTHO05D000251 9.3e-16 88.2 130 40.0
Sabra11G0118700 Salix brachista HOM05D000359 ORTHO05D000251 2.7e-15 86.7 210 35.2
COL.COLO4_09553 Corchorus olitorius HOM05D000359 ORTHO05D000251 3.5e-15 86.3 104 41.3
PGR083G1534 Punica granatum HOM05D000359 ORTHO05D000251 6.0e-15 85.5 206 32.0
Migut.M01818 Erythranthe guttata HOM05D000359 ORTHO05D000251 7.8e-15 85.1 158 37.3
Nitab4.5_0000397g0130 Nicotiana tabacum HOM05D000359 ORTHO05D000251 7.8e-15 85.1 106 44.3
Solyc07g064010.3 Solanum lycopersicum HOM05D000359 ORTHO05D000251 1.0e-14 84.7 163 37.4
Nitab4.5_0002342g0130 Nicotiana tabacum HOM05D000359 ORTHO05D000251 1.3e-14 84.3 118 42.4
Duzib268G1303 Durio zibethinus HOM05D000359 ORTHO05D000251 1.7e-14 84.0 214 31.8
Manes.03G121900 Manihot esculenta HOM05D000359 ORTHO05D000251 1.7e-14 84.0 205 33.2
Manes.15G077600 Manihot esculenta HOM05D000359 ORTHO05D000251 1.7e-14 84.0 212 39.2
Nn1g03724 Nelumbo nucifera HOM05D000359 ORTHO05D000251 1.7e-14 84.0 209 33.0
Solyc10g006540.4 Solanum lycopersicum HOM05D000359 ORTHO05D000251 2.3e-14 83.6 204 34.8
DCAR_008680 Daucus carota HOM05D000359 ORTHO05D000251 3.0e-14 83.2 229 35.4
Lj1C862G16 Lonicera japonica HOM05D000359 ORTHO05D000251 3.0e-14 83.2 151 40.4
Peaxi162Scf01086g00029 Petunia axillaris HOM05D000359 ORTHO05D000251 6.6e-14 82.0 115 44.3
Potri.001G416100 Populus trichocarpa HOM05D000359 ORTHO05D000251 8.7e-14 81.6 124 39.5
Eucgr.F01000 Eucalyptus grandis HOM05D000359 ORTHO05D000251 1.5e-13 80.9 204 36.3
PGSC0003DMG400014403 Solanum tuberosum HOM05D000359 ORTHO05D028371 2.5e-13 80.1 204 35.3
Prupe.3G222000 Prunus persica HOM05D000359 ORTHO05D000251 3.3e-13 79.7 129 38.0
MD17G1091400 Malus domestica HOM05D000359 ORTHO05D000251 4.3e-13 79.3 115 39.1
Potri.011G131700 Populus trichocarpa HOM05D000359 ORTHO05D000251 4.3e-13 79.3 202 32.2
Thecc.02G163500 Theobroma cacao HOM05D000359 ORTHO05D000251 5.6e-13 79.0 146 37.0
Sopen10g002490 Solanum pennellii HOM05D000359 ORTHO05D000251 7.3e-13 78.6 204 34.8
PGSC0003DMG400019229 Solanum tuberosum HOM05D000359 ORTHO05D000251 7.3e-13 78.6 114 42.1
GSVIVG01030643001 Vitis vinifera HOM05D000359 ORTHO05D000251 7.3e-13 78.6 167 34.7
Aqoxy4G02131 Aquilegia oxysepala HOM05D000359 ORTHO05D000251 1.6e-12 77.4 167 33.5
CSS0015435 Camellia sinensis var. sinensis HOM05D000359 ORTHO05D000251 2.1e-12 77.0 155 33.5
CANSAT11G0182 Cannabis sativa HOM05D000359 ORTHO05D000251 2.1e-12 77.0 205 34.1
ClCG05G014870 Citrullus lanatus HOM05D000359 ORTHO05D000251 8.1e-12 75.1 122 36.9
Nitab4.5_0002229g0120 Nicotiana tabacum HOM05D000359 ORTHO05D000251 8.1e-12 75.1 116 39.7
Duzib248G1579 Durio zibethinus HOM05D000359 ORTHO05D000251 1.1e-11 74.7 132 37.1
CSS0026200 Camellia sinensis var. sinensis HOM05D000359 ORTHO05D000251 1.4e-11 74.3 133 35.3
Rhsim04G0057200 Rhododendron simsii HOM05D000359 ORTHO05D000251 1.8e-11 73.9 106 39.6
RcHm_v2.0_Chr2g0160331 Rosa chinensis HOM05D000359 ORTHO05D000251 5.3e-11 72.4 153 32.0
Aqoxy1G03816 Aquilegia oxysepala HOM05D000359 ORTHO05D000251 6.9e-11 72.0 186 28.5
Oeu007615.3 Olea europaea HOM05D006170 ORTHO05D007794 6.9e-11 72.0 147 34.0
Sc07g0002620 Simmondsia chinensis HOM05D000359 ORTHO05D000251 9.0e-11 71.6 202 31.7
CAN.G1110.15 Capsicum annuum HOM05D000359 ORTHO05D000251 1.2e-10 71.2 117 41.0
MD09G1103500 Malus domestica HOM05D000359 ORTHO05D000251 1.5e-10 70.9 136 36.0
FvH4_6g43690 Fragaria vesca HOM05D000359 ORTHO05D000251 2.0e-10 70.5 130 35.4
vmacro09320 Vaccinium macrocarpon HOM05D000359 ORTHO05D000251 2.0e-10 70.5 166 31.9
SalBow8G4500 Salvia bowleyana HOM05D000359 ORTHO05D000251 2.6e-10 70.1 129 34.1
arahy.Tifrunner.gnm1.ann1.AWBY5G Arachis hypogaea HOM05D000359 ORTHO05D000251 3.4e-10 69.7 217 32.3
MELO3C018134.2 Cucumis melo HOM05D000359 ORTHO05D000251 3.4e-10 69.7 122 35.2
FAN09G3736 Fragaria x ananassa HOM05D000359 ORTHO05D000251 3.4e-10 69.7 132 35.6
FAN14G2728 Fragaria x ananassa HOM05D000359 ORTHO05D000251 3.4e-10 69.7 130 35.4
Gohir.A13G141900 Gossypium hirsutum HOM05D000359 ORTHO05D000251 7.6e-10 68.6 161 35.4
Actinidia39288 Actinidia chinensis HOM05D000359 ORTHO05D000251 1.3e-09 67.8 105 35.2
CsaV3_3G022810 Cucumis sativus L. HOM05D000359 ORTHO05D000251 1.3e-09 67.8 120 35.0
Dinv18543 Davidia involucrata HOM05D000359 ORTHO05D000251 1.3e-09 67.8 131 39.7
Sopen10g013170 Solanum pennellii HOM05D000359 ORTHO05D028371 1.3e-09 67.8 128 35.9
FAN02G3377 Fragaria x ananassa HOM05D000359 ORTHO05D000251 2.2e-09 67.0 156 32.7
Gohir.D13G146600 Gossypium hirsutum HOM05D000359 ORTHO05D000251 2.2e-09 67.0 155 36.1
Gorai.013G164400 Gossypium raimondii HOM05D000359 ORTHO05D000251 2.2e-09 67.0 155 36.1
Nitab4.5_0001134g0170 Nicotiana tabacum HOM05D000359 ORTHO05D000251 2.2e-09 67.0 132 37.1
Atru.chr6.3123 Acer truncatum HOM05D000359 ORTHO05D000251 3.8e-09 66.2 165 33.9
Peaxi162Scf00007g01346 Petunia axillaris HOM05D000359 ORTHO05D000251 6.4e-09 65.5 132 37.1
SalBow1G4852 Salvia bowleyana HOM05D000359 ORTHO05D000251 6.4e-09 65.5 130 33.8
Sabra16G0282700 Salix brachista HOM05D000359 ORTHO05D000251 8.4e-09 65.1 90 35.6
SGA_v2.0_scaffold70G23535 Striga asiatica HOM05D000359 ORTHO05D000251 1.1e-08 64.7 196 29.6
Atru.chr2.3168 Acer truncatum HOM05D000359 ORTHO05D000251 1.4e-08 64.3 170 32.4
Atru.chr2.3171 Acer truncatum HOM05D000359 ORTHO05D000251 1.4e-08 64.3 170 32.4
QL08p034073 Quercus lobata HOM05D000359 ORTHO05D000251 2.4e-08 63.5 118 36.4
FAN05G5170 Fragaria x ananassa HOM05D000359 ORTHO05D000251 3.2e-08 63.2 156 31.4
Solyc07g052730.3 Solanum lycopersicum HOM05D000359 ORTHO05D000251 3.2e-08 63.2 104 35.6
Sed0027510 Sechium edule HOM05D000359 ORTHO05D000251 4.2e-08 62.8 93 38.7
Sopen07g026350 Solanum pennellii HOM05D000359 ORTHO05D000251 4.2e-08 62.8 104 36.5
MSTRG.12293 Avicennia marina HOM05D000359 ORTHO05D000251 9.3e-08 61.6 214 35.0
Sed0017315 Sechium edule HOM05D000359 ORTHO05D000251 1.2e-07 61.2 117 37.6
CiPaw.04G118700 Carya illinoinensis HOM05D000359 ORTHO05D000251 2.1e-07 60.5 150 32.0
HanXRQChr05g0159261 Helianthus annuus HOM05D000359 ORTHO05D000251 3.5e-07 59.7 114 35.1
Hund23321 Selenicereus undatus HOM05D000359 ORTHO05D000251 3.5e-07 59.7 123 32.5
MBI13_g30232_MAGBIO Magnolia biondii HOM05D000359 ORTHO05D000251 4.6e-07 59.3 117 36.8
Gohir.A04G022700 Gossypium hirsutum HOM05D000359 ORTHO05D000251 6.0e-07 58.9 123 36.6
Potri.007G119900 Populus trichocarpa HOM05D000359 ORTHO05D000251 6.0e-07 58.9 168 31.0
Ah.06g183120 Amaranthus hybridus HOM05D000359 ORTHO05D000251 1.0e-06 58.2 129 27.9
Dinv10906 Davidia involucrata HOM05D000359 ORTHO05D000251 1.3e-06 57.8 120 35.8
Nitab4.5_0000780g0040 Nicotiana tabacum HOM05D000359 ORTHO05D000251 1.3e-06 57.8 143 34.3
Glyma.13G286100 Glycine max HOM05D000359 ORTHO05D000251 1.7e-06 57.4 92 33.7
Lalb_Chr01g0006221 Lupinus albus HOM05D000359 ORTHO05D000251 1.7e-06 57.4 204 28.4
ECA246G1910 Erigeron canadensis HOM05D000359 ORTHO05D000251 3.0e-06 56.6 108 35.2
Lsat_1_v5_gn_0_7001 Lactuca sativa HOM05D000359 ORTHO05D000251 3.9e-06 56.2 189 30.7
PGSC0003DMG400013977 Solanum tuberosum HOM05D000359 ORTHO05D000251 3.9e-06 56.2 133 33.8
Eucgr.A01735 Eucalyptus grandis HOM05D000359 ORTHO05D000251 5.1e-06 55.8 128 30.5
Glyma.12G215400 Glycine max HOM05D000359 ORTHO05D000251 5.1e-06 55.8 92 33.7
Gohir.D12G139300 Gossypium hirsutum HOM05D000359 ORTHO05D000251 6.6e-06 55.5 80 33.8
Gorai.008G150300 Gossypium raimondii HOM05D000359 ORTHO05D000251 6.6e-06 55.5 80 33.8
PSO675G1110 Papaver somniferum HOM05D000359 ORTHO05D000251 6.6e-06 55.5 126 37.3
Sopen05g027340 Solanum pennellii HOM05D000359 ORTHO05D000251 8.7e-06 55.1 107 34.6


User provided reference genes

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