Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007120 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 1.8e-179 632.5 320 100.0
CSS0047478 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 1.7e-177 625.9 326 98.2
Actinidia00356 Actinidia chinensis HOM05D006874 ORTHO05D008334 1.1e-51 208.0 215 58.1
Dinv09539 Davidia involucrata HOM05D006874 ORTHO05D008334 4.4e-45 186.0 347 42.4
TAR628G0654 Trochodendron aralioides HOM05D006874 ORTHO05D008334 1.3e-44 184.5 383 38.9
RhsimUnG0041100 Rhododendron simsii HOM05D063883 ORTHO05D008334 7.0e-43 178.7 362 40.6
RhsimUnG0123100 Rhododendron simsii HOM05D063883 ORTHO05D008334 7.0e-43 178.7 362 40.6
Nn6g34522 Nelumbo nucifera HOM05D006874 ORTHO05D008334 1.5e-32 144.4 387 34.4
Nn5g30659 Nelumbo nucifera HOM05D006874 ORTHO05D008334 3.6e-31 139.8 395 32.7
QL12p038579 Quercus lobata HOM05D006874 ORTHO05D008334 6.8e-30 135.6 385 33.0
Dinv39206 Davidia involucrata HOM05D006874 ORTHO05D008334 7.5e-29 132.1 351 34.8
Duzib093G1642 Durio zibethinus HOM05D006874 ORTHO05D008334 1.9e-27 127.5 367 31.1
Cfa013741 Carpinus fangiana HOM05D006874 ORTHO05D008334 5.4e-27 125.9 369 31.7
Manes.18G049200 Manihot esculenta HOM05D006874 ORTHO05D008334 1.6e-26 124.4 372 29.0
Actinidia19297 Actinidia chinensis HOM05D006874 ORTHO05D008334 1.0e-25 121.7 357 31.9
Potri.001G290000 Populus trichocarpa HOM05D006874 ORTHO05D008334 3.9e-25 119.8 340 32.6
MBI16_g45151_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 4.3e-24 116.3 362 31.2
vmacro21419 Vaccinium macrocarpon HOM05D006874 ORTHO05D008334 4.3e-24 116.3 338 30.8
Thecc.08G084900 Theobroma cacao HOM05D006874 ORTHO05D008334 7.3e-24 115.5 349 29.8
Cfa004701 Carpinus fangiana HOM05D006874 ORTHO05D008334 1.6e-23 114.4 362 31.8
Dinv16069 Davidia involucrata HOM05D006874 ORTHO05D008334 1.6e-23 114.4 365 32.1
Potri.002G115600 Populus trichocarpa HOM05D006874 ORTHO05D008334 2.1e-23 114.0 374 29.4
Aqoxy6G02484 Aquilegia oxysepala HOM05D006874 ORTHO05D008334 3.6e-23 113.2 399 30.1
Ciclev10016010m.g Citrus clementina HOM05D006874 ORTHO05D008334 6.2e-23 112.5 312 30.4
Haze_22393 Corylus avellana HOM05D006874 ORTHO05D008334 6.2e-23 112.5 354 30.5
Haze_22401 Corylus avellana HOM05D006874 ORTHO05D008334 6.2e-23 112.5 354 30.5
Rhsim06G0064400 Rhododendron simsii HOM05D006874 ORTHO05D008334 2.4e-22 110.5 341 31.7
Oeu053642.1 Olea europaea HOM05D006874 ORTHO05D008334 3.4e-21 106.7 338 28.4
Gohir.A06G025400 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.7e-20 104.4 316 30.7
TAR625G1551 Trochodendron aralioides HOM05D006874 ORTHO05D008334 2.9e-20 103.6 137 44.5
Gohir.D06G022500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 4.9e-20 102.8 320 30.9
Manes.05G183400 Manihot esculenta HOM05D006874 ORTHO05D008334 6.4e-20 102.4 380 28.4
Sabra16G0181500 Salix brachista HOM05D006874 ORTHO05D008334 6.4e-20 102.4 345 30.4
Gorai.010G027100 Gossypium raimondii HOM05D006874 ORTHO05D008334 1.1e-19 101.7 320 30.9
Sabra14G0008000 Salix brachista HOM05D006874 ORTHO05D008334 3.2e-19 100.1 371 28.8
Nitab4.5_0002796g0010 Nicotiana tabacum HOM05D006874 ORTHO05D008334 4.1e-19 99.8 329 30.4
Prupe.1G419500 Prunus persica HOM05D006874 ORTHO05D008334 5.4e-19 99.4 358 31.0
PSO541G5864 Papaver somniferum HOM05D006874 ORTHO05D008334 7.1e-19 99.0 392 30.1
Potri.014G013200 Populus trichocarpa HOM05D006874 ORTHO05D008334 9.2e-19 98.6 376 28.5
RcHm_v2.0_Chr6g0309981 Rosa chinensis HOM05D006874 ORTHO05D008334 1.2e-18 98.2 358 28.8
DCAR_020062 Daucus carota HOM05D006874 ORTHO05D008334 1.6e-18 97.8 312 31.4
FAN15G0895 Fragaria x ananassa HOM05D006874 ORTHO05D008334 2.7e-18 97.1 362 30.1
TWI56G0226 Tripterygium wilfordii HOM05D006874 ORTHO05D008334 2.7e-18 97.1 368 29.3
ClCG05G026570 Citrullus lanatus HOM05D006874 ORTHO05D008334 7.8e-18 95.5 344 30.8
Gorai.009G221900 Gossypium raimondii HOM05D006874 ORTHO05D008334 7.8e-18 95.5 338 28.4
Gohir.D05G215200 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.0e-17 95.1 328 29.3
AUR62037457 Chenopodium quinoa HOM05D006874 ORTHO05D008334 1.3e-17 94.7 359 27.6
Haze_10303 Corylus avellana HOM05D006874 ORTHO05D008334 1.3e-17 94.7 346 29.8
Sabra02G0091300 Salix brachista HOM05D006874 ORTHO05D008334 2.3e-17 94.0 338 29.0
Eucgr.F02227 Eucalyptus grandis HOM05D006874 ORTHO05D008334 3.0e-17 93.6 356 27.0
Potri.009G085500 Populus trichocarpa HOM05D006874 ORTHO05D008334 3.0e-17 93.6 358 29.3
QL11p029345 Quercus lobata HOM05D006874 ORTHO05D008334 3.0e-17 93.6 363 28.4
FAN27G0759 Fragaria x ananassa HOM05D006874 ORTHO05D008334 3.9e-17 93.2 351 29.1
Duzib116G0206 Durio zibethinus HOM05D006874 ORTHO05D008334 5.1e-17 92.8 366 28.7
Nitab4.5_0001426g0040 Nicotiana tabacum HOM05D006874 ORTHO05D008334 8.7e-17 92.0 334 28.7
PSO675G5853 Papaver somniferum HOM05D006874 ORTHO05D008334 1.1e-16 91.7 389 30.1
FvH4_2g32690 Fragaria vesca HOM05D006874 ORTHO05D008334 1.5e-16 91.3 363 28.9
ATR0739G189 Amborella trichopoda HOM05D006874 ORTHO05D008334 1.9e-16 90.9 357 31.4
CSS0036555 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 5.6e-16 89.4 205 33.7
CiPaw.06G164000 Carya illinoinensis HOM05D006874 ORTHO05D008334 1.2e-15 88.2 352 28.1
MELO3C016836.2 Cucumis melo HOM05D006874 ORTHO05D008334 1.6e-15 87.8 350 29.1
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.6e-15 87.8 347 29.4
CsaV3_4G035240 Cucumis sativus L. HOM05D006874 ORTHO05D008334 2.1e-15 87.4 344 30.5
MD08G1078600 Malus domestica HOM05D006874 ORTHO05D008334 4.7e-15 86.3 389 28.5
Actinidia10219 Actinidia chinensis HOM05D006874 ORTHO05D008334 6.2e-15 85.9 337 28.8
Cpa.g.sc91.58 Carica papaya HOM05D016697 ORTHO05D018163 1.4e-14 84.7 368 26.4
CiPaw.07G172200 Carya illinoinensis HOM05D006874 ORTHO05D008334 1.4e-14 84.7 312 29.2
Gohir.A05G211900 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.8e-14 84.3 333 27.6
MSTRG.24387 Avicennia marina HOM05D006874 ORTHO05D008334 5.2e-14 82.8 350 29.1
Cpa.g.sc524.2 Carica papaya HOM05D006874 ORTHO05D008334 5.2e-14 82.8 326 26.1
Manes.07G056800 Manihot esculenta HOM05D006874 ORTHO05D008334 5.2e-14 82.8 142 34.5
SalBow7G3254 Salvia bowleyana HOM05D006874 ORTHO05D008334 1.5e-13 81.3 309 29.8
Atru.chr13.867 Acer truncatum HOM05D006874 ORTHO05D008334 2.0e-13 80.9 313 30.7
AUR62035010 Chenopodium quinoa HOM05D006874 ORTHO05D008334 2.6e-13 80.5 357 25.8
Psat6g017400 Pisum sativum HOM05D006874 ORTHO05D008334 2.6e-13 80.5 308 26.9
CANSAT25G0531 Cannabis sativa HOM05D006874 ORTHO05D008334 4.4e-13 79.7 348 27.6
Cc10_g07600 Coffea canephora HOM05D006874 ORTHO05D008334 4.4e-13 79.7 338 27.2
Hund05278 Selenicereus undatus HOM05D006874 ORTHO05D008334 4.4e-13 79.7 372 26.9
PGR031G0049 Punica granatum HOM05D006874 ORTHO05D008334 5.8e-13 79.3 356 24.4
Glyma.17G233100 Glycine max HOM05D006874 ORTHO05D008334 9.9e-13 78.6 348 26.4
EL10Ac1g02352 Beta vulgaris HOM05D006874 ORTHO05D008334 1.7e-12 77.8 355 23.9
MBI16_g41242_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 4.9e-12 76.3 190 31.6
PGSC0003DMG400004918 Solanum tuberosum HOM05D006874 ORTHO05D008334 1.4e-11 74.7 342 27.8
Sed0017147 Sechium edule HOM05D006874 ORTHO05D008334 5.4e-11 72.8 346 27.2
Lalb_Chr23g0267621 Lupinus albus HOM05D006874 ORTHO05D008334 9.3e-11 72.0 371 26.7
Glyma.14G089075 Glycine max HOM05D006874 ORTHO05D008334 1.2e-10 71.6 341 26.7
FAN24G0724 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.6e-10 71.2 187 32.6
Solyc04g077535.1 Solanum lycopersicum HOM05D006874 ORTHO05D008334 1.6e-10 71.2 345 25.8
TPR.G13116 Trifolium pratense HOM05D006874 ORTHO05D008334 2.7e-10 70.5 308 26.6
Hma1.2p1_1170F.1_g263450 Hydrangea macrophylla HOM05D006874 ORTHO05D008334 4.6e-10 69.7 112 35.7
Medtr1g017530 Medicago truncatula HOM05D006874 ORTHO05D008334 4.6e-10 69.7 329 25.5
MSTRG.25026 Avicennia marina HOM05D006874 ORTHO05D008334 6.0e-10 69.3 177 27.7
Sc15g0005390 Simmondsia chinensis HOM05D006874 ORTHO05D008334 7.8e-10 68.9 349 24.4
Migut.C00474 Erythranthe guttata HOM05D006874 ORTHO05D008334 5.1e-09 66.2 334 26.0
MD15G1065400 Malus domestica HOM05D006874 ORTHO05D008334 1.1e-08 65.1 112 37.5
VMungo0647G0698 Vigna mungo HOM05D006874 ORTHO05D008334 1.5e-08 64.7 339 24.5
Lj2g0008576 Lotus japonicus HOM05D023496 ORTHO05D025628 9.6e-08 62.0 369 24.9
TAR376G0413 Trochodendron aralioides HOM05D006874 ORTHO05D008334 6.2e-07 59.3 103 42.7
Phvul.001G029700 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 3.1e-06 57.0 348 23.9


User provided reference genes

Program Settings