Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007107 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 1.8e-73 279.3 150 100.0
CSS0022959 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 9.8e-72 273.5 154 97.4
CSS0046556 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 1.2e-21 107.1 61 85.2
Dinv36956 Davidia involucrata HOM05D007191 ORTHO05D009370 5.9e-16 88.2 61 68.9
Actinidia25299 Actinidia chinensis HOM05D007191 ORTHO05D009370 1.9e-14 83.2 57 70.2
CiPaw.07G045700 Carya illinoinensis HOM05D007191 ORTHO05D009370 1.9e-14 83.2 61 65.6
Dinv13563 Davidia involucrata HOM05D007191 ORTHO05D009370 7.2e-14 81.3 61 63.9
Haze_03901 Corylus avellana HOM05D007191 ORTHO05D009370 1.2e-13 80.5 61 65.6
GSVIVG01003951001 Vitis vinifera HOM05D007191 ORTHO05D003232 3.6e-13 79.0 61 59.0
Manes.13G101800 Manihot esculenta HOM05D007191 ORTHO05D009370 7.9e-13 77.8 61 59.0
Manes.13G092280 Manihot esculenta HOM05D007191 ORTHO05D009370 1.0e-12 77.4 61 59.0
Cfa006863 Carpinus fangiana HOM05D007191 ORTHO05D000122 1.4e-12 77.0 61 63.9
QL06p036361 Quercus lobata HOM05D007191 ORTHO05D009370 5.1e-12 75.1 61 60.7
ClCG10G008240 Citrullus lanatus HOM05D007191 ORTHO05D009370 1.9e-11 73.2 61 62.3
Atru.chr3.1215 Acer truncatum HOM05D007191 ORTHO05D009370 3.3e-11 72.4 61 54.1
Potri.005G147600 Populus trichocarpa HOM05D007191 ORTHO05D009370 3.3e-11 72.4 61 52.5
Sed0016887 Sechium edule HOM05D007191 ORTHO05D009370 4.3e-11 72.0 61 60.7
vmacro13023 Vaccinium macrocarpon HOM05D007191 ORTHO05D009370 5.7e-11 71.6 60 58.3
Prupe.6G204900 Prunus persica HOM05D007191 ORTHO05D009370 1.3e-10 70.5 61 54.1
Lj2A526T20 Lonicera japonica HOM05D007191 ORTHO05D009370 1.7e-10 70.1 61 60.7
MD01G1041100 Malus domestica HOM05D007191 ORTHO05D009370 2.2e-10 69.7 61 52.5
CANSAT01G2982 Cannabis sativa HOM05D007191 ORTHO05D009370 4.8e-10 68.6 61 54.1
MELO3C014951.2 Cucumis melo HOM05D007191 ORTHO05D009370 4.8e-10 68.6 61 60.7
Eucgr.H02435 Eucalyptus grandis HOM05D007191 ORTHO05D009370 6.3e-10 68.2 61 54.1
CsaV3_3G006990 Cucumis sativus L. HOM05D007191 ORTHO05D009370 8.2e-10 67.8 61 59.0
Sabra05G0118000 Salix brachista HOM05D007191 ORTHO05D009370 1.8e-09 66.6 61 49.2
Nitab4.5_0005446g0010 Nicotiana tabacum HOM05D007191 ORTHO05D009370 4.1e-09 65.5 58 53.4
Aa31LG6G14960 Aethionema arabicum HOM05D007191 ORTHO05D009370 5.3e-09 65.1 62 51.6
AUR62003688 Chenopodium quinoa HOM05D007191 ORTHO05D009370 5.3e-09 65.1 61 50.8
VMungo0251G2065 Vigna mungo HOM05D007191 ORTHO05D009370 6.9e-09 64.7 61 52.5
arahy.Tifrunner.gnm1.ann1.DV4H7C Arachis hypogaea HOM05D007191 ORTHO05D009370 9.1e-09 64.3 61 52.5
Oeu017115.1 Olea europaea HOM05D007191 ORTHO05D009370 1.2e-08 63.9 61 49.2
Aqoxy6G01485 Aquilegia oxysepala HOM05D007191 ORTHO05D009370 2.0e-08 63.2 61 52.5
arahy.Tifrunner.gnm1.ann1.6T17AW Arachis hypogaea HOM05D007191 ORTHO05D009370 2.0e-08 63.2 61 52.5
Ciclev10025907m.g Citrus clementina HOM05D007191 ORTHO05D009370 2.0e-08 63.2 61 45.9
TWI74G0882 Tripterygium wilfordii HOM05D007191 ORTHO05D009370 2.0e-08 63.2 61 49.2
Peaxi162Scf00085g00523 Petunia axillaris HOM05D007191 ORTHO05D009370 2.6e-08 62.8 58 53.4
Phvul.003G287700 Phaseolus vulgaris HOM05D007191 ORTHO05D009370 2.6e-08 62.8 61 50.8
Glyma.08G276900 Glycine max HOM05D007191 ORTHO05D009370 3.4e-08 62.4 61 50.8
Nitab4.5_0000402g0060 Nicotiana tabacum HOM05D007191 ORTHO05D009370 3.4e-08 62.4 58 50.0
Solyc11g010900.2 Solanum lycopersicum HOM05D007191 ORTHO05D009370 3.4e-08 62.4 58 50.0
Thecc.01G088100 Theobroma cacao HOM05D007191 ORTHO05D009370 3.4e-08 62.4 61 47.5
AT4G38020 Arabidopsis thaliana HOM05D007191 ORTHO05D009370 4.5e-08 62.0 63 49.2
BcaNung05371 Brassica carinata HOM05D007191 ORTHO05D009370 4.5e-08 62.0 61 49.2
FAN19G0835 Fragaria x ananassa HOM05D007191 ORTHO05D000122 4.5e-08 62.0 61 52.5
Thhalv10025567m.g Eutrema salsugineum HOM05D007191 ORTHO05D009370 5.9e-08 61.6 62 50.0
Lj4g0026970 Lotus japonicus HOM05D007191 ORTHO05D009370 7.7e-08 61.2 61 50.8
CDE04G1458 Ceratophyllum demersum HOM05D007191 ORTHO05D009370 1.0e-07 60.8 61 52.5
COL.COLO4_27378 Corchorus olitorius HOM05D007191 ORTHO05D009370 1.0e-07 60.8 61 47.5
SalBow3G4077 Salvia bowleyana HOM05D007191 ORTHO05D009370 1.0e-07 60.8 59 47.5
Ah.03g143260 Amaranthus hybridus HOM05D007191 ORTHO05D009370 1.3e-07 60.5 61 49.2
Carub.0007s0220 Capsella rubella HOM05D007191 ORTHO05D009370 1.3e-07 60.5 62 46.8
FvH4_1g19321 Fragaria vesca HOM05D007191 ORTHO05D009370 1.7e-07 60.1 61 52.5
FAN19G2137 Fragaria x ananassa HOM05D007191 ORTHO05D000122 1.7e-07 60.1 61 52.5
Nn5g29827 Nelumbo nucifera HOM05D007191 ORTHO05D009370 1.7e-07 60.1 61 47.5
Sp7g35660 Schrenkiella parvula HOM05D007191 ORTHO05D009370 1.7e-07 60.1 62 50.0
BcaNung00953 Brassica carinata HOM05D007191 ORTHO05D009370 2.2e-07 59.7 61 45.9
C01p01190 Brassica napus HOM05D007191 ORTHO05D009370 2.2e-07 59.7 61 45.9
BolC1t00117H Brassica oleracea HOM05D007191 ORTHO05D009370 2.2e-07 59.7 61 45.9
Psat4g117600 Pisum sativum HOM05D007191 ORTHO05D009370 2.2e-07 59.7 61 47.5
MSTRG.23388 Avicennia marina HOM05D007191 ORTHO05D009370 2.9e-07 59.3 61 45.9
CAN.G1771.10 Capsicum annuum HOM05D007191 ORTHO05D009370 2.9e-07 59.3 58 46.6
Lsat_1_v5_gn_4_142441 Lactuca sativa HOM05D007191 ORTHO05D009370 2.9e-07 59.3 61 52.5
Medtr8g068220 Medicago truncatula HOM05D007191 ORTHO05D009370 2.9e-07 59.3 61 45.9
Sopen11g005640 Solanum pennellii HOM05D007191 ORTHO05D009370 2.9e-07 59.3 58 46.6
PGSC0003DMG400016118 Solanum tuberosum HOM05D007191 ORTHO05D009370 2.9e-07 59.3 58 46.6
Cpa.g.sc55.6 Carica papaya HOM05D007191 ORTHO05D009370 3.8e-07 58.9 61 45.9
A01p01070 Brassica napus HOM05D007191 ORTHO05D009370 5.0e-07 58.5 61 49.2
BraA01t00105Z Brassica rapa HOM05D007191 ORTHO05D009370 5.0e-07 58.5 61 49.2
DCAR_003441 Daucus carota HOM05D007191 ORTHO05D003232 5.0e-07 58.5 58 50.0
MBI16_g30311_MAGBIO Magnolia biondii HOM05D007191 ORTHO05D009370 5.0e-07 58.5 61 45.9
AUR62018000 Chenopodium quinoa HOM05D007191 ORTHO05D009370 6.5e-07 58.2 61 44.3
AUR62043608 Chenopodium quinoa HOM05D007191 ORTHO05D009370 6.5e-07 58.2 61 44.3
Duzib147G1243 Durio zibethinus HOM05D007191 ORTHO05D009370 1.1e-06 57.4 61 44.3
Lalb_Chr16g0392111 Lupinus albus HOM05D007191 ORTHO05D009370 1.1e-06 57.4 61 45.9
Zm00001eb053350 Zea mays HOM05D007191 ORTHO05D009370 1.4e-06 57.0 62 50.0
Ca_22623_v3 Cicer arietinum L. HOM05D007191 ORTHO05D009370 1.9e-06 56.6 61 47.5
unitig_27.g25347 Utricularia gibba HOM05D007191 ORTHO05D009370 1.9e-06 56.6 61 47.5
RcHm_v2.0_Chr2g0110691 Rosa chinensis HOM05D007191 ORTHO05D003232 2.5e-06 56.2 58 50.0
AL7G12620 Arabidopsis lyrata HOM05D007191 ORTHO05D009370 3.2e-06 55.8 62 45.2
THA.LOC104804178 Tarenaya hassleriana HOM05D007191 ORTHO05D009370 5.5e-06 55.1 61 42.6


User provided reference genes

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