Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007101 Camellia sinensis var. sinensis HOM05D006034 ORTHO05D007535 5.6e-59 230.7 116 100.0
TAR636G0081 Trochodendron aralioides HOM05D006034 ORTHO05D007535 1.1e-38 163.3 102 79.4
Lj7C673T11 Lonicera japonica HOM05D006034 ORTHO05D007535 6.1e-37 157.5 105 75.2
CAN.G1241.18 Capsicum annuum HOM05D006034 ORTHO05D007535 7.9e-37 157.1 105 76.2
QL02p062983 Quercus lobata HOM05D006034 ORTHO05D007535 2.3e-36 155.6 99 77.8
DCAR_011988 Daucus carota HOM05D006034 ORTHO05D007535 3.0e-36 155.2 101 74.3
Glyma.07G128800 Glycine max HOM05D006034 ORTHO05D007535 8.8e-36 153.7 105 71.4
Gorai.010G081700 Gossypium raimondii HOM05D006034 ORTHO05D007535 8.8e-36 153.7 105 72.4
GSVIVG01015225001 Vitis vinifera HOM05D006034 ORTHO05D007535 8.8e-36 153.7 99 76.8
FAN26G1667 Fragaria x ananassa HOM05D006034 ORTHO05D007535 1.1e-35 153.3 105 72.4
Gohir.D06G070100 Gossypium hirsutum HOM05D006034 ORTHO05D007535 1.1e-35 153.3 105 71.4
Oeu021834.2 Olea europaea HOM05D006034 ORTHO05D007535 2.0e-35 152.5 105 74.3
Gohir.A06G071400 Gossypium hirsutum HOM05D006034 ORTHO05D007535 2.6e-35 152.1 105 71.4
ECA234G0840 Erigeron canadensis HOM05D006034 ORTHO05D001756 3.3e-35 151.8 105 75.2
RcHm_v2.0_Chr2g0093061 Rosa chinensis HOM05D006034 ORTHO05D007535 3.3e-35 151.8 105 70.5
PGSC0003DMG400000341 Solanum tuberosum HOM05D006034 ORTHO05D007535 3.3e-35 151.8 105 73.3
Manes.03G032201 Manihot esculenta HOM05D006034 ORTHO05D007535 4.4e-35 151.4 105 73.3
Cc06_g11190 Coffea canephora HOM05D006034 ORTHO05D007535 5.7e-35 151.0 105 72.4
FvH4_1g22100 Fragaria vesca HOM05D006034 ORTHO05D007535 7.4e-35 150.6 105 70.5
FAN19G2130 Fragaria x ananassa HOM05D006034 ORTHO05D007535 7.4e-35 150.6 105 70.5
FAN23G1099 Fragaria x ananassa HOM05D006034 ORTHO05D007535 7.4e-35 150.6 105 71.4
VMungo0464G0679 Vigna mungo HOM05D006034 ORTHO05D007535 7.4e-35 150.6 105 70.5
AUR62031326 Chenopodium quinoa HOM05D006034 ORTHO05D007535 9.7e-35 150.2 105 70.5
Lsat_1_v5_gn_5_145641 Lactuca sativa HOM05D006034 ORTHO05D007535 2.2e-34 149.1 105 74.3
COL.COLO4_18220 Corchorus olitorius HOM05D006034 ORTHO05D001756 3.7e-34 148.3 105 73.3
MSTRG.19527 Avicennia marina HOM05D006034 ORTHO05D007535 4.8e-34 147.9 104 72.1
CiPaw.03G217800 Carya illinoinensis HOM05D006034 ORTHO05D007535 6.3e-34 147.5 105 70.5
Thecc.09G091900 Theobroma cacao HOM05D006034 ORTHO05D007535 6.3e-34 147.5 105 73.3
Ciclev10008848m.g Citrus clementina HOM05D006034 ORTHO05D007535 1.4e-33 146.4 105 70.5
arahy.Tifrunner.gnm1.ann1.VJWZ4U Arachis hypogaea HOM05D006034 ORTHO05D007535 1.8e-33 146.0 99 74.7
Migut.J00593 Erythranthe guttata HOM05D006034 ORTHO05D007535 1.8e-33 146.0 100 73.0
HanXRQChr12g0354751 Helianthus annuus HOM05D006034 ORTHO05D007535 1.8e-33 146.0 105 71.4
Glyma.01G003200 Glycine max HOM05D006034 ORTHO05D007535 2.4e-33 145.6 105 69.5
Lalb_Chr24g0393801 Lupinus albus HOM05D006034 ORTHO05D007535 2.4e-33 145.6 99 73.7
arahy.Tifrunner.gnm1.ann1.JYMB6X Arachis hypogaea HOM05D006034 ORTHO05D007535 4.1e-33 144.8 99 73.7
AagrBONN_evm.TU.Sc2ySwM_228.1841 Anthoceros agrestis HOM05D006034 ORTHO05D007535 5.3e-33 144.4 99 66.7
Nn8g38904 Nelumbo nucifera HOM05D006034 ORTHO05D007535 9.1e-33 143.7 105 69.5
SalBow6G0258 Salvia bowleyana HOM05D006034 ORTHO05D007535 9.1e-33 143.7 99 73.7
Eucgr.C00910 Eucalyptus grandis HOM05D006034 ORTHO05D007535 1.2e-32 143.3 98 72.4
Sopen12g003720 Solanum pennellii HOM05D006034 ORTHO05D007535 2.0e-32 142.5 102 71.6
Medtr4g036675 Medicago truncatula HOM05D006034 ORTHO05D007535 2.6e-32 142.1 97 72.2
Aqoxy7G04066 Aquilegia oxysepala HOM05D006034 ORTHO05D007535 4.5e-32 141.4 99 70.7
Potri.006G150200 Populus trichocarpa HOM05D006034 ORTHO05D007535 1.7e-31 139.4 105 65.7
Lj2g0022455 Lotus japonicus HOM05D006034 ORTHO05D007535 2.2e-31 139.0 99 71.7
Sabra06G0118900 Salix brachista HOM05D006034 ORTHO05D007535 2.2e-31 139.0 105 64.8
MELO3C015455.2 Cucumis melo HOM05D006034 ORTHO05D007535 2.9e-31 138.7 99 70.7
PGR142G3838 Punica granatum HOM05D006034 ORTHO05D007535 2.9e-31 138.7 105 63.8
TPR.G35498 Trifolium pratense HOM05D006034 ORTHO05D007535 3.8e-31 138.3 97 70.1
Carub.0007s1101 Capsella rubella HOM05D006034 ORTHO05D007535 5.0e-31 137.9 99 69.7
MD02G1076200 Malus domestica HOM05D006034 ORTHO05D007535 8.5e-31 137.1 99 68.7
Sed0009633 Sechium edule HOM05D006034 ORTHO05D007535 1.1e-30 136.7 105 64.8
SGA_v2.0_scaffold62G21594 Striga asiatica HOM05D006034 ORTHO05D007535 2.5e-30 135.6 105 67.6
AL7G22860 Arabidopsis lyrata HOM05D006034 ORTHO05D007535 3.2e-30 135.2 99 67.7
SEGI_04673 Sequoiadendron giganteum HOM05D006034 ORTHO05D007535 3.2e-30 135.2 97 68.0
Psat1g049600 Pisum sativum HOM05D006034 ORTHO05D007535 4.2e-30 134.8 105 65.7
Actinidia25263 Actinidia chinensis HOM05D006034 ORTHO05D007535 5.5e-30 134.4 80 81.2
Mapoly0014s0071 Marchantia polymorpha HOM05D006034 ORTHO05D007535 5.5e-30 134.4 102 60.8
PSO210G1139 Papaver somniferum HOM05D006034 ORTHO05D007535 7.2e-30 134.0 104 64.4
PSO210G3620 Papaver somniferum HOM05D006034 ORTHO05D007535 9.4e-30 133.7 104 64.4
Prupe.7G212400 Prunus persica HOM05D006034 ORTHO05D007535 2.1e-29 132.5 99 67.7
Sp7g27400 Schrenkiella parvula HOM05D006034 ORTHO05D007535 2.1e-29 132.5 99 66.7
THA.LOC104807985 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 2.7e-29 132.1 105 68.6
A08p19610 Brassica napus HOM05D006034 ORTHO05D007535 3.6e-29 131.7 99 67.7
C03p89230 Brassica napus HOM05D006034 ORTHO05D007535 4.7e-29 131.3 99 68.7
BolC3t21232H Brassica oleracea HOM05D006034 ORTHO05D007535 4.7e-29 131.3 99 68.7
CARHR237370 Cardamine hirsuta HOM05D006034 ORTHO05D007535 4.7e-29 131.3 99 65.7
MD15G1204600 Malus domestica HOM05D006034 ORTHO05D007535 4.7e-29 131.3 95 69.5
BcaC09g51741 Brassica carinata HOM05D000577 ORTHO05D007535 6.1e-29 131.0 99 66.7
BraA08t33919Z Brassica rapa HOM05D006034 ORTHO05D007535 6.1e-29 131.0 99 67.7
BcaB03g12611 Brassica carinata HOM05D006034 ORTHO05D007535 1.4e-28 129.8 99 66.7
BcaC01g01176 Brassica carinata HOM05D006034 ORTHO05D007535 3.9e-28 128.3 99 66.7
Pp3c5_18660 Physcomitrium patens HOM05D006034 ORTHO05D007535 5.2e-28 127.9 99 58.6
ATR0705G153 Amborella trichopoda HOM05D006034 ORTHO05D007535 8.8e-28 127.1 98 64.3
THA.LOC104827538 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 8.8e-28 127.1 105 66.7
Thhalv10025613m.g Eutrema salsugineum HOM05D006034 ORTHO05D007535 1.1e-27 126.7 101 63.4
Zm00001eb361670 Zea mays HOM05D006034 ORTHO05D007535 4.4e-27 124.8 105 59.0
SMO118G0489 Selaginella moellendorffii HOM05D006034 ORTHO05D007535 7.4e-27 124.0 102 55.9
HPP92_023401 Vanilla planifolia HOM05D006034 ORTHO05D007535 7.4e-27 124.0 105 59.0
Aa31LG2G20940 Aethionema arabicum HOM05D006034 ORTHO05D007535 9.7e-27 123.6 126 55.6
Os01g0722100 Oryza sativa ssp. japonica HOM05D006034 ORTHO05D007535 4.5e-24 114.8 100 58.0
Rhsim05G0022600 Rhododendron simsii HOM05D000085 ORTHO05D001756 1.3e-23 113.2 69 82.6
vmacro17221 Vaccinium macrocarpon HOM05D006034 ORTHO05D007535 1.7e-23 112.8 70 80.0
MD13G1273400 Malus domestica HOM05D006034 ORTHO05D007535 5.5e-22 107.8 99 58.6
C01p09940 Brassica napus HOM05D000577 ORTHO05D007535 7.2e-22 107.5 96 57.3
Duzib150G0162 Durio zibethinus HOM05D006034 ORTHO05D007535 2.3e-20 102.4 83 62.7
CDE05G1399 Ceratophyllum demersum HOM05D006034 ORTHO05D007535 6.8e-20 100.9 84 58.3
Hma1.2p1_0800F.1_g220000 Hydrangea macrophylla HOM05D006034 ORTHO05D007535 6.8e-20 100.9 64 78.1
CsaV3_1G040270 Cucumis sativus L. HOM05D006034 ORTHO05D007535 1.2e-19 100.1 65 78.5
Nitab4.5_0011903g0020 Nicotiana tabacum HOM05D006034 ORTHO05D007535 1.2e-19 100.1 70 71.4
Haze_25892 Corylus avellana HOM05D006034 ORTHO05D007535 2.6e-19 99.0 70 70.0
CBR_g36936 Chara braunii HOM05D006034 ORTHO05D007535 3.4e-19 98.6 103 48.5
Nitab4.5_0000540g0250 Nicotiana tabacum HOM05D006034 ORTHO05D007535 3.4e-19 98.6 65 70.8
arahy.Tifrunner.gnm1.ann1.ZF8ARW Arachis hypogaea HOM05D006034 ORTHO05D007535 3.7e-18 95.1 65 70.8
FAN28G0362 Fragaria x ananassa HOM05D006034 ORTHO05D007535 1.4e-17 93.2 59 74.6
TWI32G0461 Tripterygium wilfordii HOM05D006034 ORTHO05D007535 1.4e-17 93.2 65 73.8
arahy.Tifrunner.gnm1.ann1.N9NTP8 Arachis hypogaea HOM05D000344 ORTHO05D005296 1.8e-17 92.8 65 70.8
AUR62027411 Chenopodium quinoa HOM05D006034 ORTHO05D007535 5.3e-17 91.3 95 52.6
arahy.Tifrunner.gnm1.ann1.9T8A1S Arachis hypogaea HOM05D006034 ORTHO05D007535 7.0e-17 90.9 65 70.8
ClCG03G015740 Citrullus lanatus HOM05D000085 ORTHO05D001756 1.6e-16 89.7 70 65.7
CsaV3_UNG066540 Cucumis sativus L. HOM05D006034 ORTHO05D007535 1.3e-15 86.7 63 66.7
THA.LOC109116077 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 3.8e-15 85.1 87 55.2
arahy.Tifrunner.gnm1.ann1.4X02I9 Arachis hypogaea HOM05D006034 ORTHO05D007535 1.5e-14 83.2 65 64.6
THA.LOC104814611 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 3.2e-14 82.0 64 65.6
MBI01_g02257_MAGBIO Magnolia biondii HOM05D006034 ORTHO05D007535 4.2e-14 81.6 69 60.9
BolC1t00956H Brassica oleracea HOM05D000577 ORTHO05D001093 1.6e-13 79.7 96 46.9
Dinv36751 Davidia involucrata HOM05D006034 ORTHO05D007535 2.1e-13 79.3 51 76.5
Hund24744 Selenicereus undatus HOM05D006034 ORTHO05D007535 3.6e-13 78.6 95 49.5
arahy.Tifrunner.gnm1.ann1.C7GQ4M Arachis hypogaea HOM05D006034 ORTHO05D007535 1.8e-12 76.3 55 67.3
PRCOL_00006271 Prasinoderma coloniale HOM05D006034 ORTHO05D007535 4.0e-12 75.1 97 40.2
EL10Ac8g19307 Beta vulgaris HOM05D006034 ORTHO05D007535 2.8e-10 68.9 40 80.0
Sc18g0001930 Simmondsia chinensis HOM05D006034 ORTHO05D007535 1.6e-08 63.2 35 80.0
Atru.chr7.1566 Acer truncatum HOM05D006034 ORTHO05D007535 3.5e-08 62.0 37 78.4
Solyc12g008790.3 Solanum lycopersicum HOM05D006034 ORTHO05D007535 1.0e-07 60.5 36 80.6
Hma1.2p1_0800F.1_g219990 Hydrangea macrophylla HOM05D006034 ORTHO05D007535 2.3e-07 59.3 36 77.8
C01p09780 Brassica napus HOM05D006034 ORTHO05D007535 1.9e-06 56.2 36 72.2
Ca_29456_v3 Cicer arietinum L. HOM05D003386 ORTHO05D007535 3.3e-06 55.5 97 33.0


User provided reference genes

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